Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 5.8e-99 364.4 204 100.0
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 3.1e-44 182.6 94 96.8
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 2.0e-43 179.9 95 96.8
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 9.3e-41 171.0 94 90.4
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 2.2e-37 159.8 94 84.0
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 2.4e-36 156.4 93 78.5
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 3.4e-35 152.5 93 78.5
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 4.5e-35 152.1 92 80.4
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 4.5e-35 152.1 92 80.4
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.9e-35 151.8 92 79.3
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.9e-35 151.8 92 79.3
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.9e-35 151.8 92 79.3
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 1.0e-34 151.0 94 76.6
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.2e-34 149.8 94 77.7
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.2e-34 149.8 94 77.7
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 2.9e-34 149.4 92 78.3
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 6.5e-34 148.3 93 76.3
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 8.5e-34 147.9 94 77.7
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 1.1e-33 147.5 92 76.1
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 2.5e-33 146.4 94 76.6
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 3.2e-33 146.0 92 78.3
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 5.5e-33 145.2 93 76.3
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 7.2e-33 144.8 94 74.5
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 7.2e-33 144.8 94 74.5
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 9.4e-33 144.4 94 74.5
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 1.6e-32 143.7 94 74.5
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 1.6e-32 143.7 94 75.5
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 2.1e-32 143.3 109 67.9
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 2.1e-32 143.3 94 76.6
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 3.6e-32 142.5 94 73.4
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 3.6e-32 142.5 94 76.6
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 3.6e-32 142.5 92 76.1
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 4.6e-32 142.1 94 77.7
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 4.6e-32 142.1 98 69.4
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 6.1e-32 141.7 94 74.5
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 6.1e-32 141.7 94 75.5
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 7.9e-32 141.4 94 74.5
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 1.0e-31 141.0 94 73.4
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 1.8e-31 140.2 92 73.9
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 1.8e-31 140.2 94 77.7
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 1.8e-31 140.2 94 75.5
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.8e-31 140.2 93 73.1
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 3.0e-31 139.4 93 73.1
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 3.9e-31 139.0 94 73.4
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 3.9e-31 139.0 94 73.4
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 3.9e-31 139.0 94 72.3
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 3.9e-31 139.0 95 73.7
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 5.1e-31 138.7 94 74.5
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 5.1e-31 138.7 94 75.5
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 6.7e-31 138.3 93 73.1
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 8.8e-31 137.9 93 73.1
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 8.8e-31 137.9 94 72.3
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 8.8e-31 137.9 93 72.0
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 8.8e-31 137.9 94 74.5
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 8.8e-31 137.9 92 73.9
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 8.8e-31 137.9 93 73.1
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 1.1e-30 137.5 89 73.0
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 1.1e-30 137.5 94 73.4
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 1.5e-30 137.1 94 71.3
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 1.5e-30 137.1 94 74.5
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.5e-30 137.1 94 74.5
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 1.5e-30 137.1 94 74.5
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 2.0e-30 136.7 94 71.3
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 2.0e-30 136.7 94 72.3
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 2.6e-30 136.3 94 73.4
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.6e-30 136.3 94 72.3
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 2.6e-30 136.3 93 71.0
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 3.3e-30 136.0 97 70.1
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 4.3e-30 135.6 98 70.4
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 7.4e-30 134.8 94 72.3
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 7.4e-30 134.8 94 74.5
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 9.7e-30 134.4 79 77.2
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.3e-29 134.0 93 72.0
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 1.3e-29 134.0 94 69.1
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.7e-29 133.7 94 71.3
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.7e-29 133.7 94 71.3
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 2.2e-29 133.3 93 72.0
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 2.2e-29 133.3 94 73.4
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.2e-29 133.3 96 71.9
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 2.2e-29 133.3 94 73.4
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 2.8e-29 132.9 94 71.3
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 3.7e-29 132.5 93 68.8
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.7e-29 132.5 94 70.2
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 3.7e-29 132.5 92 69.6
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 4.8e-29 132.1 94 71.3
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 4.8e-29 132.1 113 63.7
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 6.3e-29 131.7 94 69.1
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 8.2e-29 131.3 94 72.3
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 1.1e-28 131.0 94 69.1
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 1.4e-28 130.6 93 68.8
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 1.4e-28 130.6 94 72.3
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.4e-28 130.6 94 69.1
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.8e-28 130.2 94 71.3
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 3.1e-28 129.4 94 70.2
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 3.1e-28 129.4 94 71.3
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 3.1e-28 129.4 94 71.3
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 3.1e-28 129.4 94 71.3
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 4.1e-28 129.0 94 71.3
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 4.1e-28 129.0 92 71.7
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 5.3e-28 128.6 94 70.2
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 5.3e-28 128.6 93 68.8
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 6.9e-28 128.3 80 71.2
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 6.9e-28 128.3 97 67.0
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 6.9e-28 128.3 92 70.7
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 6.9e-28 128.3 88 70.5
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 9.1e-28 127.9 94 67.0
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 9.1e-28 127.9 94 68.1
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 1.5e-27 127.1 94 70.2
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 1.5e-27 127.1 93 64.5
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.0e-27 126.7 93 69.9
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 2.6e-27 126.3 79 74.7
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 3.4e-27 125.9 94 68.1
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 3.4e-27 125.9 89 68.5
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 4.5e-27 125.6 94 67.0
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 7.7e-27 124.8 94 69.1
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 7.7e-27 124.8 94 68.1
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 1.0e-26 124.4 94 67.0
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.0e-26 124.4 94 66.0
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.0e-26 124.4 79 72.2
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 1.3e-26 124.0 94 67.0
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 1.3e-26 124.0 94 67.0
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.3e-26 124.0 94 68.1
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.7e-26 123.6 94 69.1
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.2e-26 123.2 94 67.0
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 2.2e-26 123.2 94 68.1
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 3.8e-26 122.5 83 65.1
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 8.5e-26 121.3 93 62.4
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 8.5e-26 121.3 94 68.1
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 1.1e-25 120.9 94 66.0
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 1.1e-25 120.9 94 66.0
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 1.1e-25 120.9 94 61.7
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 1.1e-25 120.9 82 68.3
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 1.4e-25 120.6 106 65.1
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.4e-25 120.6 94 64.9
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.5e-25 119.8 79 67.1
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 3.2e-25 119.4 82 73.2
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 5.5e-25 118.6 79 70.9
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 7.2e-25 118.2 81 72.8
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 7.2e-25 118.2 93 60.2
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 7.2e-25 118.2 93 60.2
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 7.2e-25 118.2 79 70.9
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 9.4e-25 117.9 94 66.0
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 2.1e-24 116.7 92 65.2
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 4.7e-24 115.5 93 62.4
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 6.1e-24 115.2 94 64.9
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.0e-23 114.4 72 72.2
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 1.8e-23 113.6 92 60.9
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 6.7e-23 111.7 93 60.2
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 1.1e-22 110.9 92 58.7
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 1.5e-22 110.5 101 60.4
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 4.4e-22 109.0 93 60.2
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 1.3e-21 107.5 80 65.0
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 2.8e-21 106.3 74 63.5
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 4.8e-21 105.5 84 65.5
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 1.4e-20 104.0 82 63.4
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 1.6e-19 100.5 96 57.3
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 1.6e-19 100.5 82 62.2
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 7.7e-19 98.2 65 70.8
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 3.8e-18 95.9 97 51.5
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.1e-17 94.4 74 58.1
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.4e-15 87.4 61 62.3
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 1.2e-14 84.3 69 60.9
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 4.4e-14 82.4 94 46.8
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 7.5e-14 81.6 72 59.7
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.3e-13 80.9 52 73.1
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 6.3e-13 78.6 60 60.0
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 8.2e-13 78.2 73 45.2
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 3.1e-12 76.3 84 45.2
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 4.1e-12 75.9 74 52.7
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 3.8e-10 69.3 40 75.0
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.6e-08 63.9 63 47.6
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 6.8e-07 58.5 69 34.8
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 7.5e-06 55.1 83 34.9


User provided reference genes

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