Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G014470 Cucumis sativus L. HOM05D003334 ORTHO05D004076 2.1e-106 389.0 199 100.0
ClCG09G011880 Citrullus lanatus HOM05D003334 ORTHO05D004076 3.0e-07 59.7 31 93.5
Duzib170G0367 Durio zibethinus HOM05D003334 ORTHO05D004076 6.6e-07 58.5 31 90.3
MD04G1236500 Malus domestica HOM05D003334 ORTHO05D004076 6.6e-07 58.5 29 96.6
Oeu044972.2 Olea europaea HOM05D003334 ORTHO05D004076 6.6e-07 58.5 29 96.6
Oeu063204.2 Olea europaea HOM05D003334 ORTHO05D004076 6.6e-07 58.5 29 96.6
Sed0023632 Sechium edule HOM05D003334 ORTHO05D004076 6.6e-07 58.5 31 90.3
Thecc.09G264900 Theobroma cacao HOM05D003334 ORTHO05D004076 6.6e-07 58.5 31 90.3
COL.COLO4_25317 Corchorus olitorius HOM05D003334 ORTHO05D004076 8.6e-07 58.2 31 90.3
Gohir.D09G101200 Gossypium hirsutum HOM05D003334 ORTHO05D004076 8.6e-07 58.2 31 90.3
Gorai.006G118600 Gossypium raimondii HOM05D003334 ORTHO05D004076 8.6e-07 58.2 31 90.3
RcHm_v2.0_Chr3g0493481 Rosa chinensis HOM05D003334 ORTHO05D004076 8.6e-07 58.2 31 90.3
Sp3g03440 Schrenkiella parvula HOM05D003334 ORTHO05D004076 1.1e-06 57.8 31 90.3
CSS0022391 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
CSS0036286 Camellia sinensis var. sinensis HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
CAN.G195.16 Capsicum annuum HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
CiPaw.07G196900 Carya illinoinensis HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
Dinv04743 Davidia involucrata HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
Prupe.7G057000 Prunus persica HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
QL01p002104 Quercus lobata HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
QL06p038393 Quercus lobata HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
Hund21749 Selenicereus undatus HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
Solyc08g074410.4 Solanum lycopersicum HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
Sopen08g023060 Solanum pennellii HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
SGA_v2.0_scaffold269G46296 Striga asiatica HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
SGA_v2.0_scaffold447G51751 Striga asiatica HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
GSVIVG01020576001 Vitis vinifera HOM05D003334 ORTHO05D004076 1.5e-06 57.4 29 93.1
FvH4_4g11950 Fragaria vesca HOM05D003334 ORTHO05D004076 1.9e-06 57.0 29 93.1
FAN12G4063 Fragaria x ananassa HOM05D003334 ORTHO05D004076 1.9e-06 57.0 29 93.1
FAN17G0794 Fragaria x ananassa HOM05D003334 ORTHO05D004076 1.9e-06 57.0 29 93.1
FAN22G0185 Fragaria x ananassa HOM05D003334 ORTHO05D004076 1.9e-06 57.0 29 93.1
Hma1.2p1_0123F.1_g058080 Hydrangea macrophylla HOM05D003334 ORTHO05D004076 1.9e-06 57.0 29 93.1
MD12G1255800 Malus domestica HOM05D003334 ORTHO05D004076 1.9e-06 57.0 29 93.1
RcHm_v2.0_Chr7g0223011 Rosa chinensis HOM05D003334 ORTHO05D004076 1.9e-06 57.0 29 93.1
AL3G14620 Arabidopsis lyrata HOM05D003334 ORTHO05D004076 2.5e-06 56.6 29 93.1
Carub.0003s0375 Capsella rubella HOM05D003334 ORTHO05D004076 2.5e-06 56.6 29 93.1
Gohir.A09G104500 Gossypium hirsutum HOM05D003334 ORTHO05D004076 2.5e-06 56.6 31 87.1
THA.LOC104802839 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 2.5e-06 56.6 29 93.1
THA.LOC104821663 Tarenaya hassleriana HOM05D003334 ORTHO05D004076 2.5e-06 56.6 29 93.1
TAR636G1778 Trochodendron aralioides HOM05D003334 ORTHO05D004076 2.5e-06 56.6 31 87.1
BcaC09g47791 Brassica carinata HOM05D003334 ORTHO05D004076 3.3e-06 56.2 29 93.1
BolC1t05738H Brassica oleracea HOM05D003334 ORTHO05D004076 3.3e-06 56.2 29 93.1
Nn1g02302 Nelumbo nucifera HOM05D003334 ORTHO05D004076 3.3e-06 56.2 31 87.1
Sc06g0005190 Simmondsia chinensis HOM05D003334 ORTHO05D004076 4.3e-06 55.8 31 87.1
arahy.Tifrunner.gnm1.ann1.GB3JX0 Arachis hypogaea HOM05D003334 ORTHO05D004076 5.6e-06 55.5 29 89.7
CARHR078790 Cardamine hirsuta HOM05D003334 ORTHO05D004076 5.6e-06 55.5 31 83.9
Lalb_Chr21g0312861 Lupinus albus HOM05D003334 ORTHO05D004076 5.6e-06 55.5 31 83.9
Nitab4.5_0009273g0020 Nicotiana tabacum HOM05D003334 ORTHO05D004076 5.6e-06 55.5 29 89.7
Nitab4.5_0009273g0030 Nicotiana tabacum HOM05D003334 ORTHO05D004076 5.6e-06 55.5 29 89.7
AT3G04600 Arabidopsis thaliana HOM05D003334 ORTHO05D004076 7.3e-06 55.1 29 89.7
BcaB04g21362 Brassica carinata HOM05D003334 ORTHO05D004076 7.3e-06 55.1 29 89.7
Dinv27617 Davidia involucrata HOM05D003334 ORTHO05D004076 7.3e-06 55.1 29 89.7
Eucgr.B01376 Eucalyptus grandis HOM05D003334 ORTHO05D004076 7.3e-06 55.1 29 89.7
Eucgr.B01628 Eucalyptus grandis HOM05D003334 ORTHO05D004076 7.3e-06 55.1 29 89.7
Thhalv10004344m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 7.3e-06 55.1 29 86.2
Thhalv10020864m.g Eutrema salsugineum HOM05D003334 ORTHO05D004076 7.3e-06 55.1 29 89.7
HanXRQChr11g0333651 Helianthus annuus HOM05D003334 ORTHO05D004076 7.3e-06 55.1 29 89.7
Peaxi162Scf00213g01416 Petunia axillaris HOM05D003334 ORTHO05D004076 7.3e-06 55.1 29 89.7
TWI34G0756 Tripterygium wilfordii HOM05D003334 ORTHO05D004076 7.3e-06 55.1 31 83.9
MSTRG.11832 Avicennia marina HOM05D003334 ORTHO05D004076 9.5e-06 54.7 29 86.2
EL10Ac4g09810 Beta vulgaris HOM05D003334 ORTHO05D004076 9.5e-06 54.7 31 83.9
A01p40810 Brassica napus HOM05D003334 ORTHO05D004076 9.5e-06 54.7 29 89.7
BNapus_Darmor_BZH_scaffold_78p00900 Brassica napus HOM05D003334 ORTHO05D004076 9.5e-06 54.7 29 89.7
BraA01t04517Z Brassica rapa HOM05D003334 ORTHO05D004076 9.5e-06 54.7 29 89.7
AUR62009179 Chenopodium quinoa HOM05D003334 ORTHO05D004076 9.5e-06 54.7 31 83.9
HanXRQChr17g0559071 Helianthus annuus HOM05D003334 ORTHO05D004076 9.5e-06 54.7 29 89.7
Manes.12G077800 Manihot esculenta HOM05D003334 ORTHO05D004076 9.5e-06 54.7 31 83.9
Prupe.7G057800 Prunus persica HOM05D003334 ORTHO05D004076 9.5e-06 54.7 29 89.7


User provided reference genes

Program Settings