Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G010440 Cucumis sativus L. HOM05D005511 ORTHO05D006616 0.0e+00 1317.0 688 100.0
ClCG05G026390 Citrullus lanatus HOM05D005511 ORTHO05D006616 0.0e+00 1233.4 688 94.3
Sed0022409 Sechium edule HOM05D005511 ORTHO05D006616 0.0e+00 1152.1 687 85.0
MELO3C018377.2 Cucumis melo HOM05D005511 ORTHO05D006616 0.0e+00 1078.9 644 88.5
Dinv37487 Davidia involucrata HOM05D005511 ORTHO05D006616 4.0e-253 878.2 722 67.0
QL12p025629 Quercus lobata HOM05D005511 ORTHO05D006616 8.9e-253 877.1 701 68.5
Cfa013295 Carpinus fangiana HOM05D005511 ORTHO05D006616 7.5e-252 874.0 700 69.1
Dinv38802 Davidia involucrata HOM05D005511 ORTHO05D006616 6.2e-246 854.4 685 67.4
TWI34G0645 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 4.3e-239 831.6 703 65.1
Glyma.17G079400 Glycine max HOM05D005511 ORTHO05D006616 2.1e-238 829.3 717 65.4
Lalb_Chr25g0287701 Lupinus albus HOM05D005511 ORTHO05D006616 4.0e-237 825.1 708 63.6
Phvul.001G199500 Phaseolus vulgaris HOM05D005511 ORTHO05D006616 4.0e-237 825.1 731 63.1
Thecc.09G000500 Theobroma cacao HOM05D005511 ORTHO05D006616 6.9e-237 824.3 721 64.2
COL.COLO4_18647 Corchorus olitorius HOM05D005511 ORTHO05D006616 9.0e-237 823.9 701 64.5
CiPaw.07G210700 Carya illinoinensis HOM05D005511 ORTHO05D006616 2.2e-235 819.3 691 65.1
Eucgr.H04509 Eucalyptus grandis HOM05D005511 ORTHO05D006616 3.8e-235 818.5 684 65.4
Glyma.12G151100 Glycine max HOM05D005511 ORTHO05D006616 4.9e-235 818.1 733 62.3
GSVIVG01029743001 Vitis vinifera HOM05D005511 ORTHO05D006616 9.3e-234 813.9 699 67.1
Gohir.A06G108200 Gossypium hirsutum HOM05D005511 ORTHO05D006616 2.1e-233 812.8 707 63.8
Ciclev10014516m.g Citrus clementina HOM05D005511 ORTHO05D006616 5.1e-232 808.1 694 65.7
VMungo1383G1052 Vigna mungo HOM05D005511 ORTHO05D006616 1.9e-231 806.2 734 62.0
Gorai.010G125400 Gossypium raimondii HOM05D005511 ORTHO05D006616 5.6e-231 804.7 707 63.4
TPR.G32311 Trifolium pratense HOM05D005511 ORTHO05D006616 1.3e-227 793.5 714 63.3
CSS0031635 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 1.4e-226 790.0 696 64.2
Ca_09096_v3 Cicer arietinum L. HOM05D005511 ORTHO05D006616 5.4e-226 788.1 710 62.4
TWI32G1116 Tripterygium wilfordii HOM05D005511 ORTHO05D006616 9.3e-226 787.3 702 62.8
Cpa.g.sc81.17 Carica papaya HOM05D005511 ORTHO05D006616 1.2e-225 786.9 698 62.9
GSVIVG01014608001 Vitis vinifera HOM05D005511 ORTHO05D006616 6.0e-225 784.6 709 63.2
Hma1.2p1_1470F.1_g285590 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 7.9e-225 784.3 696 63.5
Medtr1g092770 Medicago truncatula HOM05D005511 ORTHO05D006616 1.0e-224 783.9 711 62.2
Lj1g0000151 Lotus japonicus HOM05D005511 ORTHO05D006616 2.3e-224 782.7 703 62.3
CANSAT25G2351 Cannabis sativa HOM05D005511 ORTHO05D006616 4.8e-222 775.0 710 62.8
Psat5g176520 Pisum sativum HOM05D005511 ORTHO05D006616 8.1e-222 774.2 729 60.5
Duzib168G0441 Durio zibethinus HOM05D005511 ORTHO05D006616 1.8e-221 773.1 720 61.1
TAR624G0177 Trochodendron aralioides HOM05D005511 ORTHO05D006616 9.0e-221 770.8 727 60.5
arahy.Tifrunner.gnm1.ann1.Q5NSRJ Arachis hypogaea HOM05D005511 ORTHO05D006616 2.0e-220 769.6 706 61.6
Actinidia31365 Actinidia chinensis HOM05D005511 ORTHO05D006616 2.6e-220 769.2 702 62.4
Potri.018G002000 Populus trichocarpa HOM05D005511 ORTHO05D006616 5.8e-220 768.1 636 66.2
Nitab4.5_0013218g0030 Nicotiana tabacum HOM05D005511 ORTHO05D006616 3.5e-217 758.8 698 61.9
MD08G1126000 Malus domestica HOM05D005511 ORTHO05D006616 3.3e-215 752.3 705 62.0
DCAR_027476 Daucus carota HOM05D005511 ORTHO05D006616 5.6e-215 751.5 735 59.0
Potri.006G279800 Populus trichocarpa HOM05D005511 ORTHO05D006616 8.2e-214 747.7 716 60.6
CAN.G841.12 Capsicum annuum HOM05D005511 ORTHO05D006616 6.9e-213 744.6 696 61.1
vmacro03505 Vaccinium macrocarpon HOM05D005511 ORTHO05D006616 6.9e-213 744.6 704 61.2
Nitab4.5_0001801g0060 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.5e-212 743.4 698 61.0
Sopen10g032680 Solanum pennellii HOM05D005511 ORTHO05D006616 1.0e-211 740.7 698 60.6
CAN.G423.39 Capsicum annuum HOM05D005511 ORTHO05D006616 1.3e-211 740.3 698 60.3
Solyc10g083200.2 Solanum lycopersicum HOM05D005511 ORTHO05D006616 1.7e-211 740.0 698 60.3
arahy.Tifrunner.gnm1.ann1.V3D0DH Arachis hypogaea HOM05D005511 ORTHO05D006616 2.2e-211 739.6 738 58.4
Peaxi162Scf00096g01112 Petunia axillaris HOM05D005511 ORTHO05D006616 4.9e-211 738.4 700 60.6
MSTRG.966 Avicennia marina HOM05D005511 ORTHO05D006616 8.4e-211 737.6 697 60.1
MD15G1105800 Malus domestica HOM05D005511 ORTHO05D006616 5.5e-210 734.9 705 60.6
PGSC0003DMG400028246 Solanum tuberosum HOM05D005511 ORTHO05D006616 7.9e-209 731.1 698 60.0
Manes.03G000300 Manihot esculenta HOM05D005511 ORTHO05D006616 1.9e-207 726.5 705 62.0
Cc03_g10050 Coffea canephora HOM05D005511 ORTHO05D006616 1.1e-205 720.7 726 58.3
Peaxi162Scf01013g00235 Petunia axillaris HOM05D005511 ORTHO05D006616 1.1e-205 720.7 702 60.4
Rhsim04G0157200 Rhododendron simsii HOM05D005511 ORTHO05D006616 1.8e-205 719.9 702 60.0
PSO541G5250 Papaver somniferum HOM05D005511 ORTHO05D006616 6.9e-205 718.0 718 59.1
Sabra18G0005200 Salix brachista HOM05D005511 ORTHO05D006616 1.2e-204 717.2 635 61.7
Hund14329 Selenicereus undatus HOM05D005511 ORTHO05D006616 3.4e-204 715.7 708 58.3
Prupe.1G457600 Prunus persica HOM05D005511 ORTHO05D006616 7.2e-202 708.0 721 59.2
Nitab4.5_0000167g0180 Nicotiana tabacum HOM05D005511 ORTHO05D006616 1.6e-201 706.8 696 58.9
PGR142G1479 Punica granatum HOM05D005511 ORTHO05D006616 2.1e-201 706.4 713 58.3
AT4G31200 Arabidopsis thaliana HOM05D005511 ORTHO05D006616 6.9e-197 691.4 721 56.0
EL10Ac5g11907 Beta vulgaris HOM05D005511 ORTHO05D006616 9.1e-197 691.0 697 59.8
Carub.0007s0934 Capsella rubella HOM05D005511 ORTHO05D006616 1.0e-195 687.6 715 55.5
AL7G20880 Arabidopsis lyrata HOM05D005511 ORTHO05D006616 1.3e-195 687.2 695 59.1
Oeu009791.1 Olea europaea HOM05D005511 ORTHO05D006616 4.2e-194 682.2 699 57.1
Ah.07g201420 Amaranthus hybridus HOM05D005511 ORTHO05D006616 5.5e-194 681.8 692 59.1
Oeu001428.2 Olea europaea HOM05D005511 ORTHO05D006616 3.3e-191 672.5 700 56.3
Oeu018783.1 Olea europaea HOM05D005511 ORTHO05D006616 3.3e-191 672.5 718 54.2
CDE07G1638 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.4e-189 667.2 706 57.4
Lsat_1_v5_gn_4_32681 Lactuca sativa HOM05D005511 ORTHO05D006616 1.4e-189 667.2 719 57.6
HPP92_005904 Vanilla planifolia HOM05D005511 ORTHO05D006616 7.0e-189 664.8 706 56.7
Thhalv10024645m.g Eutrema salsugineum HOM05D005511 ORTHO05D006616 2.0e-188 663.3 699 56.9
CARHR239100 Cardamine hirsuta HOM05D005511 ORTHO05D006616 2.6e-188 662.9 724 54.3
Aqoxy4G02032 Aquilegia oxysepala HOM05D005511 ORTHO05D006616 5.9e-188 661.8 713 58.8
FvH4_2g36600 Fragaria vesca HOM05D005511 ORTHO05D006616 2.2e-187 659.8 599 61.6
FAN15G0681 Fragaria x ananassa HOM05D005511 ORTHO05D006616 1.9e-186 656.8 601 60.9
MBI02_g34313_MAGBIO Magnolia biondii HOM05D005511 ORTHO05D006616 1.9e-186 656.8 714 58.4
RcHm_v2.0_Chr6g0305221 Rosa chinensis HOM05D005511 ORTHO05D006616 6.1e-185 651.7 543 65.2
AUR62007421 Chenopodium quinoa HOM05D005511 ORTHO05D006616 8.0e-185 651.4 698 57.3
CDE06G2039 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 3.3e-183 646.0 698 55.9
Aa31LG11G2310 Aethionema arabicum HOM05D005511 ORTHO05D006616 3.7e-182 642.5 704 55.5
ECA234G2010 Erigeron canadensis HOM05D005511 ORTHO05D006616 1.4e-181 640.6 664 57.5
FAN27G2128 Fragaria x ananassa HOM05D005511 ORTHO05D007122 3.5e-180 636.0 542 63.7
CSS0032846 Camellia sinensis var. sinensis HOM05D005511 ORTHO05D006616 4.5e-180 635.6 694 56.1
Sp7g29080 Schrenkiella parvula HOM05D005511 ORTHO05D006616 4.5e-180 635.6 715 53.0
Sc03g0008920 Simmondsia chinensis HOM05D005511 ORTHO05D006616 4.2e-178 629.0 705 55.2
A01p07040 Brassica napus HOM05D005511 ORTHO05D006616 7.2e-178 628.2 717 52.9
THA.LOC104819918 Tarenaya hassleriana HOM05D005511 ORTHO05D006616 1.6e-177 627.1 703 54.1
Nitab4.5_0001579g0070 Nicotiana tabacum HOM05D005511 ORTHO05D006616 2.7e-177 626.3 754 52.1
HanXRQChr03g0093821 Helianthus annuus HOM05D005511 ORTHO05D006616 1.7e-174 617.1 706 54.7
FAN20G1701 Fragaria x ananassa HOM05D005511 ORTHO05D007122 3.7e-174 615.9 543 61.9
BraA01t00656Z Brassica rapa HOM05D005511 ORTHO05D006616 3.1e-173 612.8 714 52.4
BcaC09g51902 Brassica carinata HOM05D005511 ORTHO05D006616 1.2e-172 610.9 701 52.8
C01p07790 Brassica napus HOM05D005511 ORTHO05D006616 1.6e-172 610.5 701 52.8
ATR1145G079 Amborella trichopoda HOM05D005511 ORTHO05D006616 5.0e-171 605.5 727 51.7
BolC1t00765H Brassica oleracea HOM05D005511 ORTHO05D006616 2.5e-170 603.2 701 52.2
Migut.H02336 Erythranthe guttata HOM05D005511 ORTHO05D006616 6.3e-166 588.6 697 49.9
ATR0686G209 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.6e-164 583.9 750 50.1
Os06g0682700 Oryza sativa ssp. japonica HOM05D005511 ORTHO05D006616 2.3e-163 580.1 566 57.4
Lj3A264G15 Lonicera japonica HOM05D005511 ORTHO05D006616 3.5e-156 556.2 644 54.8
SGA_v2.0_scaffold188G40311 Striga asiatica HOM05D005511 ORTHO05D006616 8.6e-147 525.0 569 53.6
AUR62027311 Chenopodium quinoa HOM05D005511 ORTHO05D006616 4.7e-145 519.2 563 54.2
Sc03g0008950 Simmondsia chinensis HOM05D005511 ORTHO05D006616 2.5e-138 496.9 487 59.3
unitig_32.g11169 Utricularia gibba HOM05D005511 ORTHO05D006616 4.3e-138 496.1 601 51.6
Pp3c17_14220 Physcomitrium patens HOM05D005511 ORTHO05D006616 3.2e-133 479.9 658 46.5
Mapoly0058s0003 Marchantia polymorpha HOM05D005511 ORTHO05D006616 4.0e-128 463.0 645 47.0
Nn1g03658 Nelumbo nucifera HOM05D005511 ORTHO05D006616 1.5e-127 461.1 435 60.0
Sabra06G0216900 Salix brachista HOM05D005511 ORTHO05D006616 1.0e-123 448.4 353 67.7
Haze_21772 Corylus avellana HOM05D005511 ORTHO05D006616 1.2e-121 441.4 325 70.5
Atru.chr7.2703 Acer truncatum HOM05D005511 ORTHO05D006616 9.9e-119 431.8 327 68.5
Haze_21773 Corylus avellana HOM05D005511 ORTHO05D006616 2.2e-110 404.1 350 67.7
Hma1.2p1_0379F.1_g139860 Hydrangea macrophylla HOM05D005511 ORTHO05D006616 3.8e-110 403.3 321 66.0
Atru.chr7.2702 Acer truncatum HOM05D005511 ORTHO05D006616 6.4e-110 402.5 352 65.6
Zm00001eb273620 Zea mays HOM05D005511 ORTHO05D006616 1.4e-104 384.8 392 55.1
MELO3C003615.2 Cucumis melo HOM05D005511 ORTHO05D006616 6.9e-104 382.5 229 83.8
SMO147G0244 Selaginella moellendorffii HOM05D005511 ORTHO05D006616 5.6e-98 362.8 624 39.6
CBR_g29483 Chara braunii HOM05D000785 ORTHO05D006616 2.5e-85 320.9 845 32.7
SHI01952 Sapria himalayana HOM05D005511 ORTHO05D006616 4.1e-80 303.5 379 50.1
CBR_g44445 Chara braunii HOM05D005511 ORTHO05D006616 3.4e-79 300.4 844 31.4
SEGI_09992 Sequoiadendron giganteum HOM05D005511 ORTHO05D006616 1.8e-75 288.1 365 49.9
Sabra06G0216800 Salix brachista HOM05D005511 ORTHO05D006616 3.0e-67 260.8 290 55.5
SHI01951 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-62 243.8 346 47.4
unitig_748.g7741 Utricularia gibba HOM05D005511 ORTHO05D006616 1.3e-57 228.8 284 51.1
ATR0686G036 Amborella trichopoda HOM05D005511 ORTHO05D006616 1.8e-56 224.9 300 47.7
VMungo1383G0863 Vigna mungo HOM05D005511 ORTHO05D006616 1.7e-54 218.4 142 79.6
AagrBONN_evm.TU.Sc2ySwM_228.1219 Anthoceros agrestis HOM05D005511 ORTHO05D006616 2.9e-54 217.6 414 39.9
Actinidia34689 Actinidia chinensis HOM05D005511 ORTHO05D006616 8.0e-44 183.0 215 54.0
Nitab4.5_0000365g0090 Nicotiana tabacum HOM05D005511 ORTHO05D006616 7.8e-39 166.4 125 71.2
CDE06G0583 Ceratophyllum demersum HOM05D005511 ORTHO05D006616 1.9e-37 161.8 175 48.0
ATR1145G067 Amborella trichopoda HOM05D005511 ORTHO05D006616 3.6e-36 157.5 276 39.9
Psat6g134200 Pisum sativum HOM05D005511 ORTHO05D006616 9.8e-34 149.4 129 62.0
CANSAT21G0937 Cannabis sativa HOM05D005511 ORTHO05D006616 7.3e-29 133.3 160 50.6
Cre04.g222300 Chlamydomonas reinhardtii HOM05D005511 ORTHO05D006616 3.5e-23 114.4 427 25.8
PGSC0003DMG400027627 Solanum tuberosum HOM05D005511 ORTHO05D006616 1.4e-16 92.4 80 61.2
Sc03g0008960 Simmondsia chinensis HOM05D005511 ORTHO05D006616 1.9e-13 82.0 149 44.3
TAR371G0581 Trochodendron aralioides HOM05D000874 ORTHO05D003941 1.1e-08 66.2 72 44.4
Pp3c6_280 Physcomitrium patens HOM05D000251 ORTHO05D007889 1.4e-08 65.9 98 39.8
Cc04_g07720 Coffea canephora HOM05D000251 ORTHO05D007889 2.4e-08 65.1 101 38.6
PRCOL_00003511 Prasinoderma coloniale HOM05D005511 ORTHO05D006616 2.4e-08 65.1 66 45.5
CSS0040641 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D007889 3.2e-08 64.7 73 41.1
TAR629G2997 Trochodendron aralioides HOM05D000874 ORTHO05D001267 4.2e-08 64.3 113 36.3
Lsat_1_v5_gn_5_24161 Lactuca sativa HOM05D000251 ORTHO05D007889 7.1e-08 63.5 68 44.1
Sc10g0009620 Simmondsia chinensis HOM05D000251 ORTHO05D007889 7.1e-08 63.5 99 38.4
Rhsim08G0139200 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.2e-07 62.8 66 40.9
Ah.02g114420 Amaranthus hybridus HOM05D000251 ORTHO05D007889 1.6e-07 62.4 62 46.8
MCO14G468 Micromonas commoda HOM05D000251 ORTHO05D007889 2.7e-07 61.6 133 34.6
HanXRQChr05g0157761 Helianthus annuus HOM05D000251 ORTHO05D007889 4.6e-07 60.8 128 35.9
AagrBONN_evm.TU.Sc2ySwM_344.5190 Anthoceros agrestis HOM05D000251 ORTHO05D007889 6.0e-07 60.5 61 45.9
CANSAT80G2803 Cannabis sativa HOM05D000251 ORTHO05D007889 6.0e-07 60.5 61 44.3
Actinidia02692 Actinidia chinensis HOM05D005511 ORTHO05D006616 7.8e-07 60.1 125 43.2
ATR0723G093 Amborella trichopoda HOM05D000251 ORTHO05D007889 7.8e-07 60.1 106 36.8
Cpa.g.sc13.78 Carica papaya HOM05D000251 ORTHO05D007889 7.8e-07 60.1 104 36.5
Haze_18572 Corylus avellana HOM05D000251 ORTHO05D007889 1.0e-06 59.7 89 40.4
Psat4g045640 Pisum sativum HOM05D000251 ORTHO05D007889 1.0e-06 59.7 105 39.0
Actinidia31039 Actinidia chinensis HOM05D000251 ORTHO05D007889 1.3e-06 59.3 96 36.5
Hma1.2p1_0595F.1_g186110 Hydrangea macrophylla HOM05D000251 ORTHO05D007889 1.7e-06 58.9 86 38.4
Medtr4g112420 Medicago truncatula HOM05D000251 ORTHO05D007889 1.7e-06 58.9 92 38.0
Pp3c12_4860 Physcomitrium patens HOM05D000874 ORTHO05D001267 1.7e-06 58.9 149 34.9
Rhsim08G0149100 Rhododendron simsii HOM05D000251 ORTHO05D007889 1.7e-06 58.9 66 40.9
Sabra12G0041800 Salix brachista HOM05D000251 ORTHO05D007889 1.7e-06 58.9 89 41.6
Dinv36870 Davidia involucrata HOM05D000251 ORTHO05D007889 2.3e-06 58.5 86 39.5
Glyma.05G015200 Glycine max HOM05D000251 ORTHO05D007889 2.3e-06 58.5 95 38.9
PRCOL_00003186 Prasinoderma coloniale HOM05D000032 ORTHO05D006970 2.3e-06 58.5 58 44.8
Aa31LG11G2570 Aethionema arabicum HOM05D000251 ORTHO05D007889 3.0e-06 58.2 67 43.3
A09p07070 Brassica napus HOM05D000251 ORTHO05D007889 3.0e-06 58.2 75 38.7
Gohir.D03G100900 Gossypium hirsutum HOM05D000251 ORTHO05D007889 3.0e-06 58.2 86 39.5
Gorai.003G106300 Gossypium raimondii HOM05D000251 ORTHO05D007889 3.0e-06 58.2 86 39.5
Nitab4.5_0004342g0020 Nicotiana tabacum HOM05D000251 ORTHO05D007889 3.0e-06 58.2 96 38.5
TAR622G0769 Trochodendron aralioides HOM05D000251 ORTHO05D007889 3.0e-06 58.2 127 33.1
Gohir.A03G074400 Gossypium hirsutum HOM05D000251 ORTHO05D007889 3.9e-06 57.8 86 39.5
Prupe.5G214300 Prunus persica HOM05D000251 ORTHO05D007889 3.9e-06 57.8 97 39.2
AL6G34270 Arabidopsis lyrata HOM05D000251 ORTHO05D007889 5.1e-06 57.4 76 38.2
arahy.Tifrunner.gnm1.ann1.ESZ5GR Arachis hypogaea HOM05D000251 ORTHO05D007889 5.1e-06 57.4 109 35.8
arahy.Tifrunner.gnm1.ann1.MAJ7P0 Arachis hypogaea HOM05D000251 ORTHO05D007889 5.1e-06 57.4 109 35.8
CAN.G781.3 Capsicum annuum HOM05D000251 ORTHO05D007889 5.1e-06 57.4 96 37.5
Mapoly0043s0012 Marchantia polymorpha HOM05D000251 ORTHO05D007889 5.1e-06 57.4 61 42.6
VMungo1215G2774 Vigna mungo HOM05D000251 ORTHO05D007889 5.1e-06 57.4 95 37.9
COL.COLO4_32187 Corchorus olitorius HOM05D000251 ORTHO05D007889 6.6e-06 57.0 86 40.7
RcHm_v2.0_Chr7g0184311 Rosa chinensis HOM05D000251 ORTHO05D007889 6.6e-06 57.0 86 40.7
unitig_736.g22471 Utricularia gibba HOM05D000251 ORTHO05D007889 6.6e-06 57.0 94 38.3
Duzib205G0552 Durio zibethinus HOM05D000251 ORTHO05D007889 8.7e-06 56.6 86 40.7
vmacro17646 Vaccinium macrocarpon HOM05D000251 ORTHO05D007889 8.7e-06 56.6 96 35.4


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