Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 0.0e+00 1910.6 967 100.0
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 0.0e+00 1763.0 967 93.1
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 0.0e+00 1671.8 1054 82.7
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 0.0e+00 1508.4 973 80.3
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 0.0e+00 1464.5 966 79.3
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 3.1e-296 1021.9 979 57.3
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 1.7e-294 1016.1 980 58.9
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 6.6e-294 1014.2 983 57.0
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 1.5e-293 1013.1 980 58.4
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 1.5e-293 1013.1 973 57.3
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 8.0e-292 1007.3 1011 57.2
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.2e-287 993.4 982 56.4
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 4.6e-287 991.5 982 56.3
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 4.3e-285 984.9 979 56.4
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 2.0e-282 976.1 989 55.6
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 2.9e-281 972.2 976 55.0
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 1.3e-278 963.4 968 54.9
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 9.5e-277 957.2 946 56.6
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 3.6e-276 955.3 948 56.6
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 1.4e-275 953.4 968 55.1
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 6.8e-275 951.0 937 55.9
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 9.9e-274 947.2 975 54.1
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 8.3e-273 944.1 988 52.6
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 1.1e-272 943.7 979 52.4
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 4.6e-271 938.3 976 53.7
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 1.0e-270 937.2 982 52.2
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 3.0e-270 935.6 977 54.1
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 1.5e-269 933.3 964 54.9
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 2.5e-269 932.6 1015 53.0
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 1.6e-268 929.9 907 56.2
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 1.8e-267 926.4 984 51.8
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 1.8e-267 926.4 984 52.7
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 8.9e-267 924.1 944 53.2
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 1.2e-266 923.7 939 54.5
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 5.8e-266 921.4 992 51.6
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 7.6e-266 921.0 985 52.0
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 3.8e-265 918.7 934 54.6
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 1.4e-264 916.8 967 54.0
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.2e-263 913.7 967 54.1
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 2.3e-262 909.4 967 53.8
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 2.3e-262 909.4 942 54.6
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 1.2e-260 903.7 974 53.1
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 1.2e-260 903.7 1007 51.5
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 3.6e-260 902.1 971 52.6
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 3.1e-259 899.0 956 52.3
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 6.9e-259 897.9 974 51.3
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 1.5e-258 896.7 919 54.4
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 3.4e-258 895.6 997 51.2
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 3.4e-258 895.6 997 51.2
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 4.4e-258 895.2 957 52.6
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 4.4e-258 895.2 924 52.9
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 5.8e-258 894.8 968 51.9
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 4.9e-257 891.7 980 51.1
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 8.4e-257 891.0 975 52.1
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 4.2e-256 888.6 976 50.5
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 6.0e-255 884.8 984 51.3
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 1.0e-254 884.0 956 52.4
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 1.0e-254 884.0 977 50.6
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 1.5e-253 880.2 959 52.3
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 2.1e-252 876.3 976 50.1
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 1.5e-250 870.2 950 51.1
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 1.1e-248 864.0 952 51.9
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 5.4e-248 861.7 961 51.6
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 5.4e-248 861.7 978 50.3
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 6.0e-247 858.2 934 51.1
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 7.9e-247 857.8 843 57.5
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 1.0e-246 857.4 992 50.6
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 8.7e-246 854.4 948 51.8
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 1.1e-245 854.0 930 50.8
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 4.3e-245 852.0 931 51.5
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 7.4e-245 851.3 954 51.0
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 2.1e-244 849.7 949 51.7
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 3.7e-244 849.0 948 50.5
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 4.0e-243 845.5 951 50.2
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 9.0e-243 844.3 982 50.2
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.5e-242 843.6 948 51.6
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 7.6e-242 841.3 956 50.0
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 9.9e-242 840.9 963 51.0
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 2.9e-241 839.3 945 49.7
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 2.7e-239 832.8 966 50.6
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 6.0e-239 831.6 821 56.0
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 3.9e-238 828.9 940 49.9
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 9.6e-237 824.3 974 49.9
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 2.4e-235 819.7 881 51.2
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 2.7e-231 806.2 972 49.0
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 6.0e-231 805.1 977 48.3
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 7.9e-231 804.7 685 60.1
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 1.0e-230 804.3 945 48.0
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 1.1e-229 800.8 993 48.2
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 6.3e-228 795.0 996 47.5
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 7.7e-226 788.1 982 47.6
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 5.0e-225 785.4 976 46.9
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 1.1e-224 784.3 715 57.6
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 1.1e-224 784.3 957 47.9
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 1.5e-221 773.9 685 58.1
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 8.2e-220 768.1 1020 45.6
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 5.5e-216 755.4 978 46.1
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 9.4e-216 754.6 978 45.1
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 3.1e-211 739.6 713 55.1
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 4.4e-205 719.2 980 45.1
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 1.3e-201 707.6 710 54.1
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 1.8e-198 697.2 776 49.7
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla HOM05D004501 ORTHO05D004944 1.7e-196 690.6 813 49.7
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 1.7e-196 690.6 712 52.2
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 3.1e-195 686.4 621 58.5
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 2.0e-189 667.2 954 43.7
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 3.1e-187 659.8 714 51.1
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 5.7e-181 639.0 928 43.2
CSS0040587 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 5.8e-173 612.5 738 48.6
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 6.6e-169 599.0 462 66.2
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 8.0e-167 592.0 691 47.5
TAR374G0010 Trochodendron aralioides HOM05D004501 ORTHO05D004944 9.8e-165 585.1 445 66.5
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 3.5e-162 576.6 682 46.6
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 1.6e-154 551.2 640 47.3
Zm00001eb215300 Zea mays HOM05D004501 ORTHO05D004944 5.6e-152 542.7 849 41.0
BolC3t15027H Brassica oleracea HOM05D004501 ORTHO05D004944 3.2e-147 526.9 525 52.4
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 7.3e-144 515.8 787 41.8
DCAR_020178 Daucus carota HOM05D004501 ORTHO05D004944 2.8e-143 513.8 676 45.0
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 9.9e-141 505.4 951 36.7
CSS0032615 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 5.1e-137 493.0 718 43.0
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 1.5e-120 438.3 716 39.1
Actinidia14399 Actinidia chinensis HOM05D004501 ORTHO05D004944 2.5e-120 437.6 759 39.7
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 4.6e-114 416.8 728 37.4
MD06G1054200 Malus domestica HOM05D004501 ORTHO05D004944 1.0e-113 415.6 521 48.8
Cpa.g.sc776.4 Carica papaya HOM05D004501 ORTHO05D004944 5.9e-101 373.2 286 64.7
MD06G1054400 Malus domestica HOM05D004501 ORTHO05D004944 4.4e-96 357.1 279 67.0
AagrBONN_evm.TU.Sc2ySwM_368.3343 Anthoceros agrestis HOM05D004501 ORTHO05D004944 9.7e-96 355.9 476 43.3
TAR374G0951 Trochodendron aralioides HOM05D004501 ORTHO05D004944 2.4e-94 351.3 515 44.7
C04p07690 Brassica napus HOM05D004501 ORTHO05D004944 6.1e-90 336.7 445 46.3
CSS0028018 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.0e-73 282.7 210 67.6
SHI29866 Sapria himalayana HOM05D004501 ORTHO05D004944 7.0e-70 270.0 234 62.4
DCAR_020177 Daucus carota HOM05D004501 ORTHO05D004944 3.6e-66 257.7 215 61.9
HanXRQChr15g0495741 Helianthus annuus HOM05D004501 ORTHO05D004944 1.5e-64 252.3 256 55.5
CSS0011270 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 4.1e-62 244.2 176 70.5
BolC4t22385H Brassica oleracea HOM05D004501 ORTHO05D004944 5.8e-56 223.8 251 47.8
FAN04G2417 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.3e-52 212.6 170 65.9
CSS0007149 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 6.4e-47 193.7 132 71.2
Cpa.g.sc776.5 Carica papaya HOM05D004501 ORTHO05D004944 9.2e-46 189.9 157 60.5
Zm00001eb142020 Zea mays HOM05D004501 ORTHO05D004944 3.5e-45 188.0 174 55.7
BolC4t22386H Brassica oleracea HOM05D004501 ORTHO05D004944 2.5e-43 181.8 271 42.4
CAN.G201.38 Capsicum annuum HOM05D004501 ORTHO05D004944 7.6e-40 170.2 312 37.2
Zm00001eb047720 Zea mays HOM05D004501 ORTHO05D004944 4.3e-35 154.5 114 62.3
PRCOL_00000429 Prasinoderma coloniale HOM05D004501 ORTHO05D004944 5.8e-32 144.1 534 27.3
Sed0019349 Sechium edule HOM05D004501 ORTHO05D004944 6.4e-31 140.6 80 80.0
CAN.G26.29 Capsicum annuum HOM05D004501 ORTHO05D004944 2.0e-24 119.0 195 40.5
GSVIVG01006616001 Vitis vinifera HOM05D004501 ORTHO05D004944 1.9e-22 112.5 80 67.5
BcaC02g12114 Brassica carinata HOM05D004501 ORTHO05D023925 1.6e-18 99.4 337 28.8
MCO16G596 Micromonas commoda HOM05D004501 ORTHO05D004944 3.6e-18 98.2 547 24.7
Cpa.g.sc776.3 Carica papaya HOM05D004501 ORTHO05D004944 2.4e-17 95.5 300 32.0
CSS0048159 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 2.3e-12 79.0 42 85.7
Zm00001eb333660 Zea mays HOM05D000230 ORTHO05D010966 1.4e-09 69.7 47 66.0


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