Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 0.0e+00 1191.8 609 100.0
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 2.4e-294 1015.0 660 81.1
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 3.6e-237 825.1 471 90.7
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 3.6e-189 665.6 599 58.6
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 3.1e-188 662.5 678 54.0
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 3.4e-187 659.1 622 55.5
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 1.4e-185 653.7 595 57.3
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 1.3e-183 647.1 606 56.3
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 1.9e-182 643.3 607 57.0
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 2.5e-182 642.9 430 78.4
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 5.2e-180 635.2 592 54.6
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 3.4e-179 632.5 596 54.4
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 9.8e-179 630.9 593 56.2
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 7.1e-177 624.8 613 55.1
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 1.2e-176 624.0 599 55.1
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 2.1e-176 623.2 606 55.3
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 2.1e-176 623.2 586 56.0
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 2.7e-176 622.9 602 54.2
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 3.3e-174 615.9 585 55.4
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 1.4e-172 610.5 597 52.9
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 3.1e-172 609.4 589 52.8
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 4.0e-172 609.0 589 53.3
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 6.8e-172 608.2 588 53.2
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 2.0e-171 606.7 599 52.8
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 2.6e-171 606.3 591 53.0
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 1.7e-170 603.6 606 53.6
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 2.1e-168 596.7 615 50.1
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 2.7e-168 596.3 615 49.9
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 2.7e-168 596.3 588 53.2
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 3.5e-168 595.9 589 51.8
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 4.6e-168 595.5 589 52.6
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 2.3e-167 593.2 615 49.9
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 6.6e-167 591.7 600 52.3
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 8.6e-167 591.3 595 53.1
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 4.7e-165 585.5 591 50.8
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 1.8e-164 583.6 613 50.7
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 4.0e-164 582.4 654 50.2
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 6.9e-164 581.6 590 51.5
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 2.4e-161 573.2 549 56.1
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 1.6e-160 570.5 607 51.1
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.6e-160 570.5 597 52.3
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 1.6e-160 570.5 590 51.7
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 4.6e-160 568.9 575 52.9
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 4.3e-158 562.4 597 51.9
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 4.3e-158 562.4 585 54.2
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 5.3e-156 555.4 619 49.4
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 2.9e-154 549.7 588 50.2
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 8.4e-154 548.1 661 46.0
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 1.4e-153 547.4 657 47.5
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 1.9e-153 547.0 590 51.5
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 1.9e-153 547.0 588 49.1
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 4.2e-153 545.8 618 46.8
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 4.2e-153 545.8 600 48.7
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 4.6e-152 542.3 599 49.7
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 1.0e-151 541.2 588 48.6
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 1.8e-151 540.4 587 48.4
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 1.1e-148 531.2 586 48.5
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 1.3e-146 524.2 601 47.8
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 2.7e-144 516.5 603 49.3
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 3.4e-139 499.6 590 46.3
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 1.3e-138 497.7 600 46.5
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 4.2e-137 492.7 597 46.7
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 5.5e-137 492.3 598 48.3
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 9.3e-137 491.5 594 47.3
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 4.6e-136 489.2 565 48.3
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 4.6e-136 489.2 593 47.6
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 7.4e-134 481.9 597 46.4
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 4.1e-132 476.1 598 46.8
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 9.0e-132 474.9 576 47.6
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 1.5e-131 474.2 528 50.2
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 1.3e-130 471.1 606 44.1
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 2.2e-130 470.3 602 44.5
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 1.6e-128 464.2 546 47.6
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 3.1e-124 449.9 616 43.3
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 2.9e-122 443.4 643 41.2
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 1.4e-121 441.0 602 43.2
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.4e-121 441.0 594 41.2
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 4.2e-121 439.5 604 42.2
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 1.4e-119 434.5 603 42.5
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 4.4e-118 429.5 373 59.2
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.7e-117 427.6 373 59.0
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 5.3e-116 422.5 604 41.9
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 2.6e-115 420.2 595 43.0
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.0e-114 416.0 373 58.2
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 1.1e-113 414.8 600 41.3
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 9.4e-113 411.8 489 47.0
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 2.4e-108 397.1 453 47.0
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.2e-107 394.8 528 44.3
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 2.6e-107 393.7 500 45.8
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 1.1e-105 388.3 654 38.5
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 1.1e-105 388.3 601 39.4
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.4e-103 381.3 373 54.7
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 6.3e-101 372.5 572 39.3
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 5.9e-99 365.9 402 49.0
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 3.6e-96 356.7 638 38.6
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 1.2e-94 351.7 330 53.9
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 8.3e-93 345.5 556 37.9
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 1.5e-86 324.7 595 36.1
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 6.6e-74 282.7 451 36.4
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 1.2e-67 261.9 272 51.8
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.0e-66 257.3 452 36.3
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.6e-62 244.2 304 44.4
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.6e-51 208.4 518 29.9
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 1.7e-42 178.3 579 30.1
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 7.3e-41 172.9 290 38.3
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 1.3e-40 172.2 543 26.7
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 2.8e-40 171.0 619 27.0
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 6.4e-37 159.8 642 25.9
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 2.5e-33 147.9 163 50.3
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 5.6e-33 146.7 281 34.5
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.7e-29 135.2 87 74.7
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 3.0e-26 124.4 142 50.0
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 1.3e-18 99.0 166 40.4
MELO3C031505.2 Cucumis melo HOM05D006351 ORTHO05D007796 3.0e-18 97.8 60 85.0
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 3.3e-17 94.4 131 40.5
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 5.7e-17 93.6 96 50.0
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 1.5e-14 85.5 82 54.9
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 1.9e-09 68.6 251 25.1
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.5e-09 68.2 63 52.4
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 3.7e-08 64.3 139 33.1
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 1.1e-07 62.8 62 50.0
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.4e-07 61.6 63 49.2
SEGI_39323 Sequoiadendron giganteum HOM05D006351 ORTHO05D007796 2.6e-06 58.2 119 32.8


User provided reference genes

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