Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 4.0e-122 441.4 219 100.0
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 9.3e-71 270.8 179 79.9
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 7.9e-70 267.7 136 97.1
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 7.4e-68 261.2 136 96.3
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 1.3e-64 250.4 137 92.7
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 7.9e-62 241.1 139 84.9
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 7.9e-62 241.1 139 84.9
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.0e-61 240.7 138 87.0
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.0e-61 240.7 138 87.0
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 5.1e-61 238.4 137 81.0
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 6.7e-61 238.0 136 83.8
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 8.7e-61 237.7 137 83.9
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 5.7e-60 235.0 136 83.8
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 5.7e-60 235.0 138 83.3
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 9.6e-60 234.2 136 81.6
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 9.6e-60 234.2 137 79.6
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 1.6e-59 233.4 137 81.8
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 2.1e-59 233.0 136 80.9
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 3.7e-59 232.3 137 82.5
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 6.3e-59 231.5 135 84.4
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 6.3e-59 231.5 137 82.5
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 8.2e-59 231.1 135 83.7
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 1.1e-58 230.7 139 79.1
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 1.4e-58 230.3 138 80.4
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 2.4e-58 229.6 139 78.4
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 4.1e-58 228.8 131 81.7
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 4.1e-58 228.8 137 81.8
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 5.3e-58 228.4 138 81.2
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 5.3e-58 228.4 138 81.2
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 5.3e-58 228.4 139 78.4
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 6.9e-58 228.0 131 80.9
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 9.0e-58 227.6 135 84.4
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 1.2e-57 227.3 139 78.4
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 1.2e-57 227.3 138 80.4
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 1.2e-57 227.3 137 81.0
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 1.5e-57 226.9 138 80.4
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 2.0e-57 226.5 137 81.0
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 2.6e-57 226.1 139 77.7
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 3.4e-57 225.7 137 78.8
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 3.4e-57 225.7 136 79.4
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 4.5e-57 225.3 136 81.6
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 4.5e-57 225.3 136 79.4
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.0e-56 224.2 137 80.3
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 1.0e-56 224.2 137 83.2
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.3e-56 223.8 134 80.6
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 1.7e-56 223.4 139 76.3
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.7e-56 223.4 147 74.1
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 1.7e-56 223.4 135 80.7
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 2.2e-56 223.0 138 80.4
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 2.2e-56 223.0 136 77.2
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 2.9e-56 222.6 131 80.2
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 5.0e-56 221.9 135 78.5
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 5.0e-56 221.9 137 81.0
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 8.5e-56 221.1 138 78.3
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 1.1e-55 220.7 137 81.0
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 1.1e-55 220.7 137 78.8
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 1.1e-55 220.7 139 78.4
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.1e-55 220.7 134 78.4
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 1.4e-55 220.3 137 81.0
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 3.2e-55 219.2 137 77.4
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 4.2e-55 218.8 139 77.7
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 7.2e-55 218.0 137 76.6
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 9.3e-55 217.6 137 78.8
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 1.6e-54 216.9 132 79.5
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 1.6e-54 216.9 136 77.2
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 2.1e-54 216.5 138 76.8
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 4.6e-54 215.3 133 78.2
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 7.9e-54 214.5 136 74.3
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 1.0e-53 214.2 136 73.5
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 1.0e-53 214.2 136 75.7
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 1.3e-53 213.8 137 74.5
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 1.3e-53 213.8 155 68.4
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 3.0e-53 212.6 147 75.5
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 3.0e-53 212.6 138 76.1
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 6.7e-53 211.5 136 75.7
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 6.7e-53 211.5 138 75.4
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 8.7e-53 211.1 136 75.0
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 1.5e-52 210.3 139 74.8
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 1.5e-52 210.3 136 75.7
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 1.5e-52 210.3 136 74.3
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 2.5e-52 209.5 136 73.5
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 2.5e-52 209.5 138 76.1
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 6.3e-51 204.9 136 71.3
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 8.2e-51 204.5 137 73.7
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 1.8e-50 203.4 137 73.7
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 2.4e-50 203.0 136 72.8
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 2.4e-50 203.0 137 73.7
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 3.1e-50 202.6 143 71.3
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 3.1e-50 202.6 179 63.1
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 6.9e-50 201.4 139 72.7
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 1.2e-49 200.7 119 76.5
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 5.9e-49 198.4 146 69.2
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 5.9e-49 198.4 146 69.2
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 5.9e-49 198.4 146 69.2
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 5.9e-49 198.4 146 69.2
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 1.7e-48 196.8 116 78.4
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 1.7e-48 196.8 130 73.1
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 2.9e-48 196.1 114 78.9
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 6.5e-48 194.9 117 76.9
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 1.9e-47 193.4 115 78.3
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 3.2e-47 192.6 115 77.4
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 3.2e-47 192.6 114 78.9
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 5.5e-47 191.8 115 77.4
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 2.7e-46 189.5 114 76.3
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 3.6e-46 189.1 120 72.5
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 4.6e-46 188.7 143 67.1
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 1.0e-45 187.6 133 69.9
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 1.8e-45 186.8 108 78.7
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 1.8e-45 186.8 108 78.7
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 1.8e-45 186.8 108 78.7
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 2.3e-45 186.4 118 72.0
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 5.1e-45 185.3 108 77.8
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 5.1e-45 185.3 108 77.8
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 6.7e-45 184.9 108 79.6
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 2.6e-44 183.0 120 77.5
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 5.7e-44 181.8 130 66.9
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 5.7e-44 181.8 130 66.9
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 1.4e-42 177.2 113 77.0
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 5.9e-41 171.8 139 66.2
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 1.1e-39 167.5 99 73.7
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 7.2e-39 164.9 126 62.7
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 1.0e-37 161.0 93 75.3
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 2.3e-37 159.8 154 59.1
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 1.2e-33 147.5 118 66.9
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 1.3e-32 144.1 84 75.0
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 1.3e-32 144.1 82 80.5
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 3.6e-30 136.0 123 60.2
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 6.1e-30 135.2 132 54.5
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 2.3e-29 133.3 76 86.8
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 2.6e-28 129.8 110 57.3
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 2.6e-28 129.8 127 52.8
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 4.4e-28 129.0 72 79.2
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 2.7e-25 119.8 136 51.5
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 7.7e-25 118.2 81 79.0
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 3.0e-21 106.3 102 52.9
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 3.4e-20 102.8 75 76.0
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 4.4e-20 102.4 81 66.7
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 5.7e-20 102.1 75 65.3
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 7.5e-20 101.7 59 71.2
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 7.5e-20 101.7 70 65.7
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 6.3e-19 98.6 117 42.7
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 6.5e-16 88.6 79 60.8
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 3.2e-15 86.3 59 62.7
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 7.2e-15 85.1 86 62.8
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 4.7e-14 82.4 80 55.0
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 4.0e-13 79.3 130 36.2
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 4.4e-12 75.9 140 40.0
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 3.5e-09 66.2 81 44.4
CSS0036753 Camellia sinensis var. sinensis HOM05D008986 ORTHO05D113366 2.1e-06 57.0 63 63.5


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