Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 0.0e+00 1102.8 539 100.0
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 2.4e-306 1054.7 540 95.4
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 2.6e-284 981.5 561 86.5
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 5.5e-266 920.6 542 84.1
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 2.0e-228 795.8 476 80.0
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 1.3e-227 793.1 549 72.3
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 1.1e-224 783.5 535 75.0
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 2.2e-222 775.8 531 71.9
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 8.3e-222 773.9 539 72.5
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 8.3e-222 773.9 524 73.7
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.0e-219 766.9 505 73.9
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 1.9e-218 762.7 504 75.0
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 3.6e-217 758.4 485 78.1
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 3.6e-217 758.4 508 72.8
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 6.2e-217 757.7 465 79.1
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 8.1e-217 757.3 497 76.1
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 8.1e-217 757.3 497 76.1
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 8.9e-216 753.8 458 79.3
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 8.9e-216 753.8 503 76.1
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 1.2e-215 753.4 493 76.3
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 1.5e-215 753.1 485 77.5
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 1.5e-215 753.1 516 73.6
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 7.5e-215 750.7 520 72.5
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 1.7e-214 749.6 516 71.7
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 3.7e-214 748.4 493 76.5
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 4.9e-214 748.0 507 72.8
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 8.3e-214 747.3 432 80.8
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 1.9e-213 746.1 494 74.9
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 1.9e-213 746.1 494 74.9
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 2.4e-213 745.7 500 74.8
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 4.1e-213 745.0 462 78.8
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 5.4e-213 744.6 454 79.5
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 2.7e-212 742.3 478 75.9
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 4.6e-212 741.5 491 73.7
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 7.8e-212 740.7 478 78.0
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 7.8e-212 740.7 465 79.1
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 1.0e-211 740.3 452 79.6
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 1.0e-211 740.3 480 75.6
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 1.3e-211 740.0 545 69.0
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 2.3e-211 739.2 495 73.7
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 1.5e-210 736.5 480 76.0
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 7.3e-210 734.2 484 76.4
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 9.5e-210 733.8 481 74.4
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 4.7e-209 731.5 454 78.2
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 6.2e-209 731.1 423 82.7
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 3.1e-208 728.8 491 72.3
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 3.1e-208 728.8 454 77.8
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 8.9e-208 727.2 499 72.1
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 8.9e-208 727.2 484 75.6
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 2.6e-207 725.7 508 70.5
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 3.4e-207 725.3 445 78.9
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 4.4e-207 724.9 464 78.2
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 5.8e-207 724.5 454 77.3
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 9.9e-207 723.8 543 68.5
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 1.7e-206 723.0 524 70.4
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 2.9e-206 722.2 511 71.6
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 2.1e-204 716.1 473 74.6
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 1.7e-203 713.0 436 78.7
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 3.0e-203 712.2 405 83.0
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 5.1e-203 711.4 459 76.0
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 1.5e-202 709.9 491 71.9
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 1.9e-202 709.5 481 74.0
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 3.3e-202 708.8 440 78.4
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 3.3e-202 708.8 425 80.0
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 3.3e-202 708.8 450 76.9
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 9.6e-202 707.2 449 77.1
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.6e-201 706.4 442 79.2
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 2.8e-201 705.7 474 73.8
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 4.7e-201 704.9 489 72.6
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 2.4e-200 702.6 472 73.3
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 1.2e-199 700.3 487 72.5
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 2.0e-199 699.5 496 71.4
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 4.4e-199 698.4 490 70.8
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 2.9e-198 695.7 462 74.9
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 1.9e-197 693.0 443 76.1
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 2.4e-197 692.6 469 73.1
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 4.2e-197 691.8 479 70.1
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 5.4e-197 691.4 517 69.6
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 9.3e-197 690.6 457 73.1
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 2.1e-196 689.5 473 73.2
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 4.6e-196 688.3 481 71.9
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 6.6e-195 684.5 460 73.9
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 6.6e-195 684.5 460 73.9
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 8.7e-195 684.1 488 71.3
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 1.9e-194 682.9 463 71.9
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 3.6e-193 678.7 491 69.5
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 3.2e-189 665.6 372 84.4
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 4.2e-189 665.2 514 64.6
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 6.0e-188 661.4 427 76.3
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 1.9e-186 656.4 449 70.4
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 1.5e-183 646.7 470 67.4
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 5.1e-179 631.7 479 66.6
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 3.4e-175 619.0 639 55.2
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 2.9e-174 615.9 517 61.7
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 4.2e-173 612.1 362 79.3
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 5.3e-168 595.1 382 74.6
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 2.2e-166 589.7 491 62.9
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 7.4e-162 574.7 444 66.7
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 1.7e-158 563.5 400 69.2
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 4.7e-156 555.4 470 62.1
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 3.1e-144 516.2 552 54.9
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 2.2e-142 510.0 262 91.6
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 3.8e-142 509.2 371 65.8
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 1.8e-139 500.4 385 63.6
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 5.2e-139 498.8 272 86.8
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 3.1e-136 489.6 380 62.1
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 3.1e-136 489.6 319 75.5
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 5.9e-135 485.3 454 54.0
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 1.1e-133 481.1 422 56.2
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 4.8e-129 465.7 285 79.6
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 7.0e-128 461.8 343 70.0
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 4.4e-122 442.6 341 67.7
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 1.1e-120 438.0 251 82.5
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 6.1e-116 422.2 382 56.3
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 3.7e-113 412.9 435 50.6
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 1.4e-104 384.4 416 48.6
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 2.1e-103 380.6 236 78.8
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 2.2e-97 360.5 530 40.4
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 2.1e-92 344.0 286 63.6
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 8.1e-92 342.0 427 46.4
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 6.0e-71 272.7 189 70.9
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 1.8e-70 271.2 206 64.6
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 1.1e-69 268.5 175 73.7
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.7e-57 228.0 140 77.9
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 3.0e-54 217.2 235 55.7
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 6.3e-52 209.5 289 43.3
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 6.3e-52 209.5 300 38.3
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 6.9e-51 206.1 184 58.7
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 5.0e-49 199.9 298 37.9
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 1.6e-47 194.9 396 31.3
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 1.4e-46 191.8 184 56.0
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 1.4e-46 191.8 112 79.5
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 1.2e-42 178.7 349 35.2
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 5.9e-42 176.4 115 72.2
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 1.1e-40 172.2 388 32.0
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 1.1e-37 162.2 304 33.6
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 1.1e-35 155.6 135 63.7
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 3.2e-32 144.1 74 82.4
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 4.4e-29 133.7 117 61.5
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 2.2e-28 131.3 258 38.8
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 5.3e-27 126.7 113 61.1
Nn3g21873 Nelumbo nucifera HOM05D002268 ORTHO05D006937 6.5e-25 119.8 92 65.2
SEGI_39418 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 4.8e-20 103.6 128 42.2
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 5.9e-18 96.7 99 55.6
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 5.5e-16 90.1 218 33.5
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 2.3e-14 84.7 104 54.8
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 1.4e-11 75.5 146 34.2
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 4.2e-08 63.9 31 87.1
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 5.6e-08 63.5 38 84.2
BolC2t12207H Brassica oleracea HOM05D002268 ORTHO05D042165 8.0e-07 59.7 121 37.2
C02p10780 Brassica napus HOM05D002268 ORTHO05D042165 1.4e-06 58.9 121 36.4
C01p11650 Brassica napus HOM05D026831 ORTHO05D011195 4.0e-06 57.4 105 37.1


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