Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_4G021830 Cucumis sativus L. HOM05D000070 ORTHO05D045030 5.9e-177 624.0 298 100.0
ClCG04G000030 Citrullus lanatus HOM05D000070 ORTHO05D006683 2.8e-94 349.4 275 67.6
Sed0024008 Sechium edule HOM05D000070 ORTHO05D006683 6.5e-43 178.7 260 43.1
MELO3C019399.2 Cucumis melo HOM05D000070 ORTHO05D006683 4.7e-41 172.6 261 41.8
ClCG05G009240 Citrullus lanatus HOM05D000070 ORTHO05D006683 1.4e-40 171.0 262 41.6
Sed0002493 Sechium edule HOM05D000070 ORTHO05D006683 4.0e-40 169.5 298 38.9
CsaV3_3G019540 Cucumis sativus L. HOM05D000070 ORTHO05D006683 6.8e-40 168.7 280 39.6
RcHm_v2.0_Chr5g0032311 Rosa chinensis HOM05D000070 ORTHO05D006683 7.5e-39 165.2 248 40.3
MD11G1256000 Malus domestica HOM05D000070 ORTHO05D006683 9.8e-39 164.9 266 37.2
Cfa020618 Carpinus fangiana HOM05D000070 ORTHO05D006683 2.2e-38 163.7 252 40.1
CANSAT35G1857 Cannabis sativa HOM05D000070 ORTHO05D006683 2.8e-38 163.3 300 35.3
Duzib213G1081 Durio zibethinus HOM05D000070 ORTHO05D006683 2.8e-38 163.3 247 39.3
Gohir.D08G032300 Gossypium hirsutum HOM05D000070 ORTHO05D006683 3.7e-38 162.9 241 42.3
Gorai.004G029700 Gossypium raimondii HOM05D000070 ORTHO05D006683 8.3e-38 161.8 241 41.5
Thecc.07G098900 Theobroma cacao HOM05D000070 ORTHO05D006683 1.1e-37 161.4 262 40.1
VMungo1080G0328 Vigna mungo HOM05D000070 ORTHO05D006683 3.1e-37 159.8 248 41.1
Haze_09387 Corylus avellana HOM05D000070 ORTHO05D006683 5.4e-37 159.1 252 39.3
Duzib170G1082 Durio zibethinus HOM05D000070 ORTHO05D006683 1.2e-36 157.9 251 40.2
ECA240G2408 Erigeron canadensis HOM05D000070 ORTHO05D006683 2.7e-36 156.8 232 38.8
FAN25G1528 Fragaria x ananassa HOM05D000070 ORTHO05D006683 3.5e-36 156.4 260 38.5
FAN21G0502 Fragaria x ananassa HOM05D000070 ORTHO05D006683 4.5e-36 156.0 260 38.5
FvH4_3g19240 Fragaria vesca HOM05D000070 ORTHO05D006683 5.9e-36 155.6 260 38.8
FAN16G3451 Fragaria x ananassa HOM05D000070 ORTHO05D006683 5.9e-36 155.6 260 38.8
FAN11G2237 Fragaria x ananassa HOM05D000070 ORTHO05D006683 1.0e-35 154.8 260 38.1
Cpa.g.sc80.3 Carica papaya HOM05D006724 ORTHO05D006683 1.7e-35 154.1 190 45.3
Ciclev10007229m.g Citrus clementina HOM05D000070 ORTHO05D006683 1.7e-35 154.1 252 41.3
HanXRQChr13g0391161 Helianthus annuus HOM05D000070 ORTHO05D006683 2.3e-35 153.7 225 40.4
Atru.chr2.2387 Acer truncatum HOM05D000070 ORTHO05D006683 3.8e-35 152.9 279 36.6
Dinv20211 Davidia involucrata HOM05D000070 ORTHO05D006683 6.6e-35 152.1 266 34.6
Lalb_Chr20g0109491 Lupinus albus HOM05D000070 ORTHO05D006683 8.6e-35 151.8 255 38.8
Gohir.A01G060800 Gossypium hirsutum HOM05D000070 ORTHO05D006683 1.9e-34 150.6 245 39.6
Gohir.D01G047300 Gossypium hirsutum HOM05D000070 ORTHO05D006683 2.5e-34 150.2 245 40.8
Gorai.002G066800 Gossypium raimondii HOM05D000070 ORTHO05D006683 2.5e-34 150.2 245 40.8
Phvul.005G069600 Phaseolus vulgaris HOM05D000070 ORTHO05D006683 2.5e-34 150.2 250 38.8
Glyma.13G273300 Glycine max HOM05D000070 ORTHO05D006683 5.6e-34 149.1 261 39.1
Potri.011G141400 Populus trichocarpa HOM05D000070 ORTHO05D006683 1.2e-33 147.9 283 36.0
Hma1.2p1_0416F.1_g148460 Hydrangea macrophylla HOM05D000070 ORTHO05D006683 1.6e-33 147.5 224 39.7
Lj1A837G48 Lonicera japonica HOM05D000070 ORTHO05D006683 1.6e-33 147.5 230 37.4
QL08p023642 Quercus lobata HOM05D000070 ORTHO05D006683 1.6e-33 147.5 260 37.3
Sc07g0002540 Simmondsia chinensis HOM05D000070 ORTHO05D006683 1.6e-33 147.5 236 36.0
CiPaw.11G166700 Carya illinoinensis HOM05D000070 ORTHO05D006683 2.1e-33 147.1 284 35.2
Manes.15G090100 Manihot esculenta HOM05D000070 ORTHO05D006683 2.1e-33 147.1 248 39.5
Nitab4.5_0002019g0010 Nicotiana tabacum HOM05D000070 ORTHO05D006683 2.1e-33 147.1 277 36.1
Glyma.12G227000 Glycine max HOM05D000070 ORTHO05D006683 2.8e-33 146.7 251 39.0
CAN.G162.29 Capsicum annuum HOM05D000070 ORTHO05D006683 3.6e-33 146.4 266 35.0
Lalb_Chr25g0286211 Lupinus albus HOM05D000070 ORTHO05D006683 3.6e-33 146.4 260 38.1
Sabra11G0127000 Salix brachista HOM05D000070 ORTHO05D006683 3.6e-33 146.4 280 35.4
Nitab4.5_0000246g0030 Nicotiana tabacum HOM05D000070 ORTHO05D006683 4.7e-33 146.0 268 37.7
CSS0012964 Camellia sinensis var. sinensis HOM05D000070 ORTHO05D006683 6.1e-33 145.6 245 36.7
Migut.H01962 Erythranthe guttata HOM05D000070 ORTHO05D006683 8.0e-33 145.2 238 37.0
Lj3g0013945 Lotus japonicus HOM05D000070 ORTHO05D006683 8.0e-33 145.2 274 36.1
Solyc07g062770.2 Solanum lycopersicum HOM05D000070 ORTHO05D006683 8.0e-33 145.2 242 38.4
PGR083G0044 Punica granatum HOM05D000070 ORTHO05D006683 1.4e-32 144.4 263 33.8
Aqoxy1G02305 Aquilegia oxysepala HOM05D000070 ORTHO05D006683 1.8e-32 144.1 187 43.9
arahy.Tifrunner.gnm1.ann1.48N9B9 Arachis hypogaea HOM05D000070 ORTHO05D006683 1.8e-32 144.1 252 36.5
Peaxi162Scf00069g01833 Petunia axillaris HOM05D000070 ORTHO05D006683 1.8e-32 144.1 242 37.2
SalBow7G0119 Salvia bowleyana HOM05D000070 ORTHO05D006683 3.0e-32 143.3 259 37.5
PGSC0003DMG400012401 Solanum tuberosum HOM05D000070 ORTHO05D006683 4.0e-32 142.9 269 35.3
MSTRG.14209 Avicennia marina HOM05D000070 ORTHO05D006683 5.2e-32 142.5 238 38.7
A03p39160 Brassica napus HOM05D000070 ORTHO05D006683 6.8e-32 142.1 245 35.5
BraA03t13065Z Brassica rapa HOM05D000070 ORTHO05D006683 6.8e-32 142.1 245 35.5
TPR.G7945 Trifolium pratense HOM05D000070 ORTHO05D006683 6.8e-32 142.1 251 37.8
Ah.06g184760 Amaranthus hybridus HOM05D000070 ORTHO05D006683 8.9e-32 141.7 250 35.6
Ca_03533_v3 Cicer arietinum L. HOM05D000070 ORTHO05D006683 8.9e-32 141.7 251 38.2
Lsat_1_v5_gn_9_98220 Lactuca sativa HOM05D000070 ORTHO05D006683 1.2e-31 141.4 216 38.0
Actinidia35238 Actinidia chinensis HOM05D000070 ORTHO05D006683 1.5e-31 141.0 311 31.5
Sed0011266 Sechium edule HOM05D000070 ORTHO05D045030 1.5e-31 141.0 222 40.5
AL3G27480 Arabidopsis lyrata HOM05D000070 ORTHO05D006683 2.6e-31 140.2 244 35.2
SGA_v2.0_scaffold70G23693 Striga asiatica HOM05D000070 ORTHO05D006683 2.6e-31 140.2 241 39.0
Sopen07g030990 Solanum pennellii HOM05D000070 ORTHO05D006683 3.4e-31 139.8 242 37.6
BcaC01g03897 Brassica carinata HOM05D000070 ORTHO05D006683 4.4e-31 139.4 226 37.6
TWI38G2035 Tripterygium wilfordii HOM05D000070 ORTHO05D006683 5.7e-31 139.0 251 36.3
C03p47510 Brassica napus HOM05D000070 ORTHO05D006683 1.7e-30 137.5 244 34.4
BolC3t17015H Brassica oleracea HOM05D000070 ORTHO05D006683 1.7e-30 137.5 244 34.4
Medtr2g078630 Medicago truncatula HOM05D000070 ORTHO05D006683 2.2e-30 137.1 259 36.7
Nn1g06393 Nelumbo nucifera HOM05D000070 ORTHO05D006683 2.2e-30 137.1 236 35.2
Sp3g13330 Schrenkiella parvula HOM05D000070 ORTHO05D006683 2.9e-30 136.7 243 34.2
THA.LOC104810458 Tarenaya hassleriana HOM05D000070 ORTHO05D006683 2.9e-30 136.7 255 33.3
EL10Ac4g08256 Beta vulgaris HOM05D000070 ORTHO05D006683 4.9e-30 136.0 253 33.2
PSO541G4369 Papaver somniferum HOM05D000070 ORTHO05D006683 8.3e-30 135.2 208 38.9
Psat5g241520 Pisum sativum HOM05D000070 ORTHO05D006683 1.8e-29 134.0 245 37.1
Aa31LG8G2340 Aethionema arabicum HOM05D000070 ORTHO05D006683 2.4e-29 133.7 275 32.4
Eucgr.F01177 Eucalyptus grandis HOM05D000070 ORTHO05D006683 3.2e-29 133.3 250 34.8
CARHR090100 Cardamine hirsuta HOM05D000070 ORTHO05D006683 4.1e-29 132.9 151 43.7
TAR624G0583 Trochodendron aralioides HOM05D000070 ORTHO05D006683 4.1e-29 132.9 294 32.0
Carub.0003s1477 Capsella rubella HOM05D000070 ORTHO05D006683 5.4e-29 132.5 241 34.0
AT3G15120 Arabidopsis thaliana HOM05D000070 ORTHO05D006683 9.2e-29 131.7 151 43.7
Thhalv10019880m.g Eutrema salsugineum HOM05D000070 ORTHO05D006683 1.6e-28 131.0 151 42.4
vmacro09518 Vaccinium macrocarpon HOM05D000070 ORTHO05D006683 2.0e-28 130.6 246 33.7
AUR62036148 Chenopodium quinoa HOM05D000070 ORTHO05D006683 4.6e-28 129.4 246 33.7
AUR62019488 Chenopodium quinoa HOM05D000070 ORTHO05D006683 1.0e-27 128.3 245 33.5
CDE10G0809 Ceratophyllum demersum HOM05D000070 ORTHO05D006683 8.6e-27 125.2 256 33.6
Cc05_g11650 Coffea canephora HOM05D000070 ORTHO05D006683 1.5e-26 124.4 262 33.6
CDE10G0784 Ceratophyllum demersum HOM05D000070 ORTHO05D006683 1.9e-26 124.0 138 45.7
HPP92_024566 Vanilla planifolia HOM05D000070 ORTHO05D006683 5.6e-26 122.5 193 36.8
unitig_899.g15571 Utricularia gibba HOM05D000070 ORTHO05D006683 2.3e-24 117.1 229 34.1
Os01g0668300 Oryza sativa ssp. japonica HOM05D000070 ORTHO05D006683 6.8e-24 115.5 213 33.3
SHI21482 Sapria himalayana HOM05D000070 ORTHO05D006683 7.5e-23 112.1 231 32.5
Zm00001eb157300 Zea mays HOM05D000070 ORTHO05D006683 7.5e-23 112.1 141 44.0
ATR0602G265 Amborella trichopoda HOM05D000070 ORTHO05D006683 9.8e-23 111.7 189 35.4
SEGI_00098 Sequoiadendron giganteum HOM05D000070 ORTHO05D006683 5.4e-21 105.9 196 34.7
arahy.Tifrunner.gnm1.ann1.T5288F Arachis hypogaea HOM05D000070 ORTHO05D006683 1.2e-17 94.7 115 43.5
GSVIVG01014274001 Vitis vinifera HOM05D000070 ORTHO05D006683 8.9e-16 88.6 110 43.6
Prupe.4G173800 Prunus persica HOM05D000070 ORTHO05D006683 2.2e-14 84.0 154 31.2
Dinv14946 Davidia involucrata HOM05D000070 ORTHO05D006683 3.2e-13 80.1 145 33.8
AagrBONN_evm.TU.Sc2ySwM_368.1632 Anthoceros agrestis HOM05D000070 ORTHO05D006683 6.6e-11 72.4 169 30.2
DCAR_013128 Daucus carota HOM05D000070 ORTHO05D006683 4.4e-07 59.7 204 26.5


User provided reference genes

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