Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 1.2e-199 699.9 427 100.0
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 1.9e-189 666.0 427 94.8
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 2.8e-180 635.6 427 90.9
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 4.8e-148 528.5 428 76.6
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 5.7e-125 451.8 281 80.8
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 7.5e-125 451.4 281 81.1
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 2.4e-123 446.4 281 80.8
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 2.0e-122 443.4 284 80.3
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 1.7e-121 440.3 283 80.2
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 2.3e-121 439.9 281 79.4
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 2.3e-121 439.9 255 86.3
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 2.9e-121 439.5 283 79.9
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 6.6e-121 438.3 270 82.2
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 6.6e-121 438.3 270 82.2
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 8.6e-121 438.0 289 77.9
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 8.6e-121 438.0 289 77.9
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.1e-120 437.6 289 77.5
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 1.1e-120 437.6 289 77.5
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 1.9e-120 436.8 259 83.4
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 2.5e-120 436.4 290 77.9
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 3.3e-120 436.0 270 81.9
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 4.3e-120 435.6 280 79.6
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 4.3e-120 435.6 434 57.4
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 9.5e-120 434.5 279 79.6
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 1.2e-119 434.1 269 80.7
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 2.1e-119 433.3 292 77.4
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 6.1e-119 431.8 290 76.2
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 1.2e-117 427.6 269 81.8
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 3.4e-117 426.0 252 84.1
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 9.8e-117 424.5 270 80.4
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 2.9e-116 422.9 276 79.0
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 4.9e-116 422.2 278 77.3
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 1.1e-115 421.0 265 80.8
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 4.1e-115 419.1 277 77.6
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 5.4e-115 418.7 263 81.0
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 7.0e-115 418.3 273 79.1
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 1.2e-114 417.5 254 82.3
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 1.6e-114 417.2 255 82.0
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 2.0e-114 416.8 255 80.8
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 3.0e-113 412.9 267 78.3
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 3.9e-113 412.5 253 82.6
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 8.6e-113 411.4 278 77.3
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 1.1e-112 411.0 266 78.9
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 1.9e-112 410.2 272 78.3
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 2.5e-112 409.8 283 74.6
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 3.3e-112 409.5 298 71.8
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 3.3e-112 409.5 282 76.2
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 9.5e-112 407.9 259 79.9
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 1.2e-111 407.5 270 78.5
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 4.7e-111 405.6 269 76.2
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 6.2e-111 405.2 281 74.4
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 2.3e-110 403.3 265 77.4
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 4.0e-110 402.5 265 78.1
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 8.9e-110 401.4 281 73.0
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 2.6e-109 399.8 259 76.8
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 2.6e-109 399.8 259 76.8
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 4.4e-109 399.1 268 75.0
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 3.7e-108 396.0 264 75.0
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 8.3e-108 394.8 260 77.3
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 5.4e-107 392.1 253 77.5
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 7.0e-107 391.7 278 70.9
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 1.2e-106 391.0 278 71.6
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.2e-106 391.0 242 80.2
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 1.6e-106 390.6 264 74.6
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 4.6e-106 389.0 266 74.1
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 1.3e-105 387.5 254 77.2
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.3e-105 387.5 269 72.1
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 3.9e-105 386.0 249 78.3
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 5.1e-105 385.6 207 88.9
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 6.6e-105 385.2 280 71.4
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 1.1e-104 384.4 263 73.8
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 3.3e-104 382.9 263 73.8
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 7.3e-104 381.7 324 63.3
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.6e-103 380.6 272 73.9
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 2.1e-103 380.2 269 74.0
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 2.1e-103 380.2 254 76.4
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 6.2e-103 378.6 252 76.6
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 8.1e-103 378.3 278 68.7
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 1.1e-102 377.9 251 73.7
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 2.3e-102 376.7 264 73.1
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 2.3e-102 376.7 264 73.1
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 4.0e-102 375.9 267 72.7
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 4.0e-102 375.9 276 71.4
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 5.2e-102 375.6 279 70.6
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 6.8e-102 375.2 209 85.2
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 8.9e-102 374.8 298 66.4
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 1.5e-101 374.0 264 72.7
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 2.0e-101 373.6 267 72.3
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 2.0e-101 373.6 267 72.3
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 3.4e-101 372.9 264 72.3
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 3.4e-101 372.9 267 71.5
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 4.4e-101 372.5 263 72.6
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 5.8e-101 372.1 267 72.7
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 2.2e-100 370.2 268 70.1
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 2.2e-100 370.2 268 70.1
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 1.1e-99 367.9 268 69.8
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 1.1e-99 367.9 268 69.8
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 3.2e-99 366.3 268 71.6
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 7.1e-99 365.2 230 78.7
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 1.1e-94 351.3 263 69.2
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 3.1e-94 349.7 206 81.1
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 3.2e-91 339.7 277 63.5
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 1.2e-90 337.8 262 66.0
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 1.0e-89 334.7 268 64.9
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 5.1e-89 332.4 250 69.6
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.1e-86 324.7 250 68.4
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 1.4e-86 324.3 231 75.3
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 1.4e-86 324.3 255 62.4
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 2.6e-85 320.1 262 66.8
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.5e-80 303.5 202 74.3
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 1.9e-75 287.3 190 73.7
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 1.2e-74 284.6 209 67.5
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 3.5e-74 283.1 194 71.6
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 3.3e-72 276.6 289 53.6
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 4.0e-70 269.6 193 72.0
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 1.0e-68 265.0 186 72.0
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 8.7e-65 251.9 186 68.8
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 1.1e-64 251.5 184 70.7
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 1.8e-62 244.2 209 56.9
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 7.6e-61 238.8 267 48.3
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 1.4e-59 234.6 199 57.3
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 5.0e-52 209.5 266 49.2
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 6.7e-49 199.1 171 58.5
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 2.0e-45 187.6 192 50.0
TAR636G1840 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.6e-42 177.9 228 48.2
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 1.5e-35 154.8 304 34.5
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 2.8e-31 140.6 84 83.3
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 2.9e-28 130.6 80 83.8
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 2.7e-26 124.0 170 40.0
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 5.2e-25 119.8 275 31.3
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 7.0e-22 109.4 54 94.4
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.2e-21 108.6 59 86.4
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 6.1e-18 96.3 52 84.6
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 1.2e-08 65.5 153 32.7
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 7.5e-08 62.8 180 30.0
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 9.8e-08 62.4 182 31.3
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 2.2e-07 61.2 181 30.4
FvH4_5g19731 Fragaria vesca HOM05D005750 ORTHO05D035649 2.2e-07 61.2 56 64.3
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 2.2e-07 61.2 175 28.0
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 1.1e-06 58.9 175 27.4
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 1.1e-06 58.9 175 27.4
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 1.1e-06 58.9 184 29.3
FvH4_2g13931 Fragaria vesca HOM05D051764 ORTHO05D035649 1.1e-06 58.9 49 69.4
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 1.4e-06 58.5 180 27.8
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 1.4e-06 58.5 181 26.0
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 1.8e-06 58.2 184 28.3
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.8e-06 58.2 187 27.8
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 3.2e-06 57.4 182 30.2
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 3.2e-06 57.4 155 27.7
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 5.4e-06 56.6 175 28.0
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 5.4e-06 56.6 147 27.2
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 5.4e-06 56.6 157 28.7
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 5.4e-06 56.6 175 27.4
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 7.0e-06 56.2 148 29.7
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 7.0e-06 56.2 189 25.9


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