Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.1e-90 336.7 170 100.0
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 7.0e-82 307.4 156 97.4
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 9.1e-82 307.0 170 90.0
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 3.0e-69 265.4 170 80.6
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.0e-56 223.8 160 70.0
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 8.6e-56 220.7 164 68.9
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 4.3e-55 218.4 166 68.7
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 5.6e-55 218.0 173 68.2
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 9.5e-55 217.2 140 78.6
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 9.5e-55 217.2 162 69.8
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.6e-54 216.5 167 68.3
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 2.1e-54 216.1 167 68.3
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 2.8e-54 215.7 141 74.5
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 3.6e-54 215.3 134 79.9
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 8.0e-54 214.2 166 69.3
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 1.8e-53 213.0 122 82.8
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 2.3e-53 212.6 198 61.1
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 3.0e-53 212.2 150 72.0
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 4.0e-53 211.8 170 62.9
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 1.5e-52 209.9 170 62.4
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 1.5e-52 209.9 129 77.5
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 2.0e-52 209.5 146 72.6
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 9.8e-52 207.2 164 66.5
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.3e-51 206.8 170 65.9
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 1.7e-51 206.5 132 72.7
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 2.2e-51 206.1 129 76.7
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.9e-51 205.7 173 64.7
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 4.9e-51 204.9 165 67.3
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 6.4e-51 204.5 171 63.7
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 6.4e-51 204.5 162 65.4
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 1.4e-50 203.4 120 81.7
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 1.4e-50 203.4 135 72.6
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 1.4e-50 203.4 162 67.3
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 1.8e-50 203.0 146 72.6
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 3.2e-50 202.2 166 63.3
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 9.2e-50 200.7 118 78.0
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 9.2e-50 200.7 112 84.8
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 1.2e-49 200.3 165 63.6
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 1.6e-49 199.9 123 77.2
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 2.0e-49 199.5 112 85.7
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 3.5e-49 198.7 169 57.4
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 4.6e-49 198.4 123 76.4
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 4.6e-49 198.4 123 76.4
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 4.6e-49 198.4 123 76.4
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 4.6e-49 198.4 123 76.4
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 5.9e-49 198.0 123 76.4
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 3.0e-48 195.7 162 61.7
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 1.1e-47 193.7 163 64.4
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 1.1e-47 193.7 123 74.0
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.5e-47 193.4 159 67.9
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 4.3e-47 191.8 141 66.7
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 9.5e-47 190.7 143 66.4
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 1.2e-46 190.3 123 74.0
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 1.2e-46 190.3 167 61.7
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 2.1e-46 189.5 141 66.7
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 2.1e-46 189.5 166 62.0
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 3.6e-46 188.7 170 60.6
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 6.2e-46 188.0 118 76.3
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 6.2e-46 188.0 167 61.7
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 2.3e-45 186.0 170 60.0
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 5.2e-45 184.9 112 81.2
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 6.8e-45 184.5 152 62.5
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 6.8e-45 184.5 154 61.7
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 2.0e-44 183.0 136 66.2
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 2.6e-44 182.6 168 59.5
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 4.4e-44 181.8 112 80.4
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 1.3e-43 180.3 108 81.5
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 2.9e-43 179.1 111 74.8
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 1.1e-42 177.2 128 67.2
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 5.4e-42 174.9 128 68.0
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 7.0e-42 174.5 102 81.4
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 7.0e-42 174.5 102 81.4
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.2e-41 173.7 104 79.8
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 1.2e-41 173.7 168 54.2
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 1.6e-41 173.3 104 77.9
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.7e-41 172.6 164 58.5
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 6.0e-41 171.4 109 76.1
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 3.9e-40 168.7 104 78.8
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 5.6e-39 164.9 183 53.0
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.1e-37 160.6 109 73.4
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 5.2e-37 158.3 120 64.2
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 8.9e-37 157.5 124 62.9
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 8.9e-37 157.5 110 66.4
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 8.9e-37 157.5 120 63.3
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 9.8e-36 154.1 168 53.6
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 1.3e-35 153.7 143 60.8
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.7e-35 153.3 110 68.2
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 1.7e-35 153.3 158 52.5
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 6.4e-35 151.4 112 68.8
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 4.1e-34 148.7 127 59.1
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 4.1e-34 148.7 157 52.9
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 1.2e-33 147.1 117 61.5
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 1.3e-32 143.7 163 50.3
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 1.7e-32 143.3 143 56.6
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.2e-30 137.1 99 71.7
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 4.1e-26 122.1 102 57.8
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 9.2e-26 120.9 86 65.1
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 1.9e-18 96.7 79 63.3
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.1e-13 80.9 98 50.0
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 2.9e-11 72.8 122 36.1
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 1.9e-10 70.1 69 53.6
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 2.3e-08 63.2 102 31.4
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 2.5e-07 59.7 42 64.3
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 2.5e-07 59.7 42 64.3


User provided reference genes

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