Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 6.5e-188 660.6 343 100.0
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 4.4e-176 621.3 341 95.0
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 2.6e-168 595.5 344 91.6
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 9.2e-142 507.3 328 79.0
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 5.3e-121 438.3 321 69.8
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.2e-119 433.0 348 66.7
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 4.9e-119 431.8 336 67.0
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 6.4e-119 431.4 347 65.4
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 2.5e-118 429.5 324 66.7
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.5e-118 428.3 329 68.1
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 1.2e-117 427.2 316 69.3
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.6e-117 426.8 316 69.3
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 2.1e-117 426.4 340 65.9
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.9e-117 424.5 316 68.7
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.0e-116 424.1 316 69.0
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 1.3e-116 423.7 321 68.5
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 1.3e-116 423.7 317 69.1
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.3e-116 423.7 341 65.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.8e-116 423.3 316 68.4
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 6.7e-116 421.4 343 65.3
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.9e-115 419.9 316 68.0
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 1.6e-114 416.8 343 64.1
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 2.4e-113 412.9 321 65.1
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.2e-112 410.6 338 64.8
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 5.8e-112 408.3 317 66.9
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 7.6e-112 407.9 346 62.7
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.3e-111 407.1 344 62.8
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.7e-111 406.8 341 63.9
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 7.9e-109 397.9 342 61.4
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 3.0e-108 396.0 322 62.4
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 6.7e-108 394.8 317 63.4
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 2.5e-107 392.9 325 65.5
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.3e-106 390.6 340 59.4
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 1.3e-106 390.6 340 58.8
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 2.2e-106 389.8 317 63.7
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 3.7e-106 389.0 317 63.1
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 6.3e-106 388.3 317 63.1
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 6.3e-106 388.3 332 62.0
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 8.2e-106 387.9 322 62.1
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.4e-105 387.1 317 61.8
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.4e-105 387.1 317 61.8
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 1.4e-105 387.1 323 63.8
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 1.8e-105 386.7 324 63.6
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.5e-104 383.6 317 62.8
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 3.4e-104 382.5 316 63.3
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 3.4e-104 382.5 321 63.2
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 4.5e-104 382.1 316 63.3
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 4.5e-104 382.1 317 60.9
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 5.9e-104 381.7 319 62.4
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 5.9e-104 381.7 313 63.6
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 7.7e-104 381.3 314 63.1
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 7.7e-104 381.3 317 60.6
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.0e-103 380.9 322 61.2
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 2.9e-103 379.4 316 61.7
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 5.0e-103 378.6 342 59.1
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 1.4e-102 377.1 321 62.6
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 1.9e-102 376.7 316 60.4
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 5.5e-102 375.2 317 61.8
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 9.4e-102 374.4 318 60.4
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 1.2e-101 374.0 317 61.2
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 1.2e-101 374.0 317 61.2
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 2.7e-101 372.9 318 62.9
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 4.6e-101 372.1 314 61.8
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 7.9e-101 371.3 317 61.2
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 5.1e-100 368.6 320 60.6
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 6.7e-100 368.2 318 62.3
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 1.1e-99 367.5 317 60.3
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 3.3e-99 365.9 317 60.6
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.3e-99 365.9 317 61.2
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 9.7e-99 364.4 302 62.9
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.1e-97 360.9 347 59.1
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.1e-97 360.9 302 62.6
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 4.1e-97 359.0 314 58.3
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 5.9e-96 355.1 343 57.7
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 6.5e-95 351.7 322 58.4
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 4.2e-94 349.0 282 61.3
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 1.6e-93 347.1 315 57.5
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 2.1e-93 346.7 318 56.6
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 2.7e-93 346.3 331 56.2
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 6.1e-93 345.1 266 65.4
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 6.1e-93 345.1 326 55.8
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 8.8e-92 341.3 323 55.4
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.3e-90 337.4 318 57.2
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 7.0e-89 331.6 322 55.0
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 2.0e-88 330.1 324 56.5
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.5e-88 329.3 266 65.8
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 3.1e-81 306.2 244 62.3
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 2.0e-80 303.5 317 51.4
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 1.5e-78 297.4 281 54.1
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.9e-78 297.0 319 50.8
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 7.2e-78 295.0 349 49.0
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 1.2e-75 287.7 314 50.6
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 1.5e-75 287.3 352 47.7
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 1.5e-70 270.8 306 53.6
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 6.1e-69 265.4 319 47.0
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.5e-67 260.8 321 45.8
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 1.2e-64 251.1 178 69.7
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 1.6e-61 240.7 198 61.6
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 4.7e-61 239.2 318 45.6
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.6e-56 224.2 224 54.0
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 2.8e-53 213.4 186 60.2
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 9.8e-51 204.9 159 69.2
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 5.4e-49 199.1 198 55.1
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 1.6e-37 161.0 250 41.2
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.4e-28 131.3 108 65.7
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 3.4e-27 126.7 108 63.9
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 1.9e-25 120.9 266 30.5
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.6e-24 117.9 89 73.0
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 1.2e-19 101.7 94 55.3
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 1.1e-17 95.1 126 42.1
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 6.6e-15 85.9 83 59.0


User provided reference genes

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