Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 5.0e-227 790.8 413 100.0
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 4.3e-218 761.1 413 96.6
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 4.0e-200 701.4 413 89.8
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 3.5e-196 688.3 427 87.6
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 3.4e-159 565.5 413 70.0
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 1.9e-157 559.7 412 68.4
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 2.0e-151 539.7 413 65.6
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 7.7e-151 537.7 421 65.8
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.9e-150 535.8 413 65.1
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 8.5e-150 534.3 407 65.8
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.8e-147 526.6 393 66.9
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 8.2e-145 517.7 415 65.3
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.1e-144 517.3 417 64.0
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.4e-144 516.9 415 65.3
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 2.4e-144 516.2 392 66.8
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 2.4e-144 516.2 415 65.1
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 4.1e-144 515.4 417 63.8
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 2.0e-143 513.1 393 65.4
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 3.5e-143 512.3 416 63.0
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 3.5e-143 512.3 393 65.4
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 4.5e-143 511.9 416 62.7
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.0e-142 510.8 419 63.7
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.0e-142 510.8 393 65.4
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 1.0e-142 510.8 413 64.6
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 2.9e-142 509.2 415 63.1
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 4.2e-141 505.4 395 65.8
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 1.2e-140 503.8 413 63.2
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 2.7e-140 502.7 395 63.3
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 8.0e-140 501.1 393 64.4
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.4e-139 500.4 413 63.2
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 8.8e-139 497.7 414 62.3
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 2.6e-138 496.1 419 60.9
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.6e-138 496.1 419 61.1
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 2.6e-138 496.1 414 62.6
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 9.8e-138 494.2 393 63.9
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 2.2e-137 493.0 393 63.4
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 2.8e-137 492.7 413 62.5
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 3.7e-137 492.3 395 64.1
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 2.4e-136 489.6 393 63.1
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 4.1e-136 488.8 413 61.7
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 3.5e-135 485.7 413 61.3
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 1.0e-134 484.2 393 62.3
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.7e-134 483.4 415 59.8
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 2.2e-134 483.0 415 62.2
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.9e-134 482.6 393 61.6
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 3.8e-134 482.3 413 60.5
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 1.5e-133 480.3 391 66.0
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.9e-133 479.9 414 60.1
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 3.2e-133 479.2 394 63.5
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 2.7e-132 476.1 415 59.8
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 6.1e-132 474.9 413 59.8
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 8.0e-132 474.6 392 62.0
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 4.9e-129 465.3 396 60.1
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 6.3e-129 464.9 399 60.7
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 1.8e-128 463.4 371 62.8
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 4.1e-128 462.2 417 59.2
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 7.0e-128 461.5 394 61.4
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 1.2e-127 460.7 395 61.5
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.7e-127 459.5 399 60.9
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 3.5e-127 459.1 393 58.8
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 5.0e-126 455.3 415 57.8
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 3.3e-125 452.6 440 57.5
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.2e-124 450.7 413 59.1
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 4.7e-124 448.7 408 59.3
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 4.7e-124 448.7 395 58.7
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 3.0e-123 446.0 394 60.7
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 5.2e-123 445.3 396 59.1
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 6.4e-121 438.3 373 60.9
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 2.4e-120 436.4 395 57.7
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 3.2e-120 436.0 393 57.3
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 4.1e-120 435.6 343 64.4
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 3.5e-119 432.6 415 57.6
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.0e-118 431.0 366 62.0
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 1.7e-118 430.3 420 55.0
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.7e-118 430.3 415 56.1
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.9e-118 429.1 337 63.8
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 3.9e-118 429.1 395 58.0
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 3.6e-116 422.5 396 54.0
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.2e-114 417.5 312 68.3
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 3.4e-114 416.0 399 55.6
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 1.3e-113 414.1 401 56.1
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 8.3e-113 411.4 394 55.1
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 2.4e-112 409.8 414 53.1
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 3.9e-110 402.5 465 51.4
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 6.6e-110 401.7 408 51.0
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 4.4e-106 389.0 357 58.8
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 2.7e-103 379.8 357 52.9
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.8e-99 367.1 350 54.6
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 1.8e-99 367.1 409 51.3
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 1.2e-92 344.4 327 52.9
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 6.2e-92 342.0 364 52.2
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 2.0e-90 337.0 450 43.1
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 6.4e-89 332.0 331 54.7
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 1.2e-87 327.8 399 43.9
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-86 324.3 338 53.0
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.3e-86 323.6 340 52.6
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 8.7e-86 321.6 299 57.9
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-84 317.4 299 57.2
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-84 317.4 299 57.2
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.6e-84 317.4 299 57.2
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 2.1e-84 317.0 425 43.5
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 2.0e-82 310.5 285 59.3
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 4.9e-81 305.8 203 72.9
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 1.1e-77 294.7 297 54.9
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.5e-69 267.7 198 67.7
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.4e-64 251.1 272 50.4
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.0e-62 243.4 230 56.1
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 4.1e-43 179.9 332 34.3
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 5.3e-35 152.9 178 44.9
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 6.5e-33 146.0 88 75.0
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.8e-28 129.8 133 51.1
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 5.5e-24 116.3 212 34.4
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.3e-22 110.9 165 38.2
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 6.8e-22 109.4 123 45.5
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 1.6e-10 71.6 60 60.0
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.0e-10 71.2 80 57.5
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.0e-10 71.2 80 57.5
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.0e-10 71.2 80 57.5
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 9.5e-08 62.4 44 68.2
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 1.2e-07 62.0 47 59.6


User provided reference genes

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