Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 1.5e-133 479.6 241 100.0
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 1.2e-132 476.5 241 99.2
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 4.8e-129 464.5 253 93.7
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 9.4e-125 450.3 241 92.9
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 3.0e-115 418.7 241 84.6
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 4.4e-114 414.8 233 84.5
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 8.3e-113 410.6 237 82.7
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 3.1e-112 408.7 240 81.2
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.1e-112 408.3 237 82.3
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 9.2e-112 407.1 241 83.0
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 1.2e-111 406.8 240 82.9
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 2.0e-111 406.0 241 80.9
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 2.7e-111 405.6 241 82.2
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 2.3e-110 402.5 233 83.3
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 2.9e-110 402.1 241 81.3
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 2.9e-110 402.1 241 81.3
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 2.9e-110 402.1 241 80.5
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 3.8e-110 401.7 231 84.4
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 6.6e-110 401.0 241 80.9
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 8.6e-110 400.6 241 79.3
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.1e-109 400.2 241 80.5
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 1.9e-109 399.4 241 80.5
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 2.5e-109 399.1 240 80.8
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 5.6e-109 397.9 233 80.3
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 5.6e-109 397.9 232 81.9
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 5.6e-109 397.9 241 79.7
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 7.3e-109 397.5 241 81.7
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 9.5e-109 397.1 241 80.1
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.2e-108 396.7 238 80.3
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.2e-108 396.7 241 80.5
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.1e-108 396.0 220 86.8
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 2.8e-108 395.6 241 79.7
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 6.1e-108 394.4 241 80.1
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 8.0e-108 394.0 227 81.1
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 8.0e-108 394.0 241 79.3
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 8.0e-108 394.0 232 80.6
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.0e-107 393.7 247 78.5
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.4e-107 393.3 241 77.6
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 5.2e-107 391.3 241 78.4
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 6.8e-107 391.0 241 78.8
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 8.9e-107 390.6 241 79.3
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 1.2e-106 390.2 241 79.3
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 1.5e-106 389.8 241 78.4
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.5e-106 389.8 241 78.0
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.5e-106 389.8 241 77.2
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 2.0e-106 389.4 241 78.4
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.6e-106 389.0 231 81.8
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 77.2
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 78.8
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 77.6
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 77.6
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 9.8e-106 387.1 264 75.0
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.3e-105 386.7 241 77.2
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.3e-105 386.7 241 77.2
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 1.7e-105 386.3 241 77.6
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.9e-105 385.6 241 78.4
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 3.7e-105 385.2 243 78.6
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 4.9e-105 384.8 241 75.5
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 4.9e-105 384.8 231 81.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.4e-105 384.4 241 76.8
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 1.1e-104 383.6 241 76.8
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.8e-104 382.9 238 79.8
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.8e-104 382.9 263 72.6
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 2.4e-104 382.5 241 75.1
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 7.0e-104 380.9 261 72.0
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 2.7e-103 379.0 241 76.3
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 1.0e-102 377.1 236 76.7
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.7e-102 376.3 226 77.9
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 1.7e-102 376.3 223 80.3
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 3.0e-102 375.6 229 79.0
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 3.0e-102 375.6 243 75.7
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 6.6e-102 374.4 229 79.0
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.5e-101 372.5 238 75.2
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 1.2e-100 370.2 230 77.4
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 3.6e-100 368.6 234 73.9
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 8.9e-99 364.0 228 75.9
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 3.4e-98 362.1 240 70.8
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 4.4e-98 361.7 228 75.4
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 9.8e-98 360.5 209 84.2
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.3e-97 360.1 228 75.0
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.2e-97 359.4 234 76.5
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.3e-97 357.5 261 68.2
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.1e-96 357.1 241 74.3
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 2.4e-96 355.9 241 73.9
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 1.0e-94 350.5 238 72.7
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.0e-94 349.0 250 68.8
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 6.6e-94 347.8 282 63.5
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 4.3e-93 345.1 210 81.0
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 9.5e-93 344.0 259 66.0
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 9.5e-85 317.4 196 77.6
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 5.2e-83 311.6 232 67.7
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 3.4e-82 308.9 196 78.1
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.4e-82 308.5 275 60.0
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 9.9e-82 307.4 192 77.1
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 3.7e-81 305.4 226 64.2
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 6.4e-81 304.7 241 66.0
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.1e-80 303.9 222 64.9
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 7.8e-79 297.7 211 69.7
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.8e-76 289.3 306 52.6
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 3.2e-72 275.8 241 55.2
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 1.6e-71 273.5 177 75.7
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.1e-71 273.1 194 69.6
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.2e-66 257.3 220 54.5
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 1.4e-64 250.4 160 73.8
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 6.0e-63 245.0 233 57.5
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.3e-62 243.8 225 52.0
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.1e-59 234.2 194 62.9
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 6.9e-59 231.5 186 64.0
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 6.9e-59 231.5 186 64.0
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 1.5e-58 230.3 151 74.8
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 5.5e-56 221.9 227 48.0
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.1e-48 197.6 123 78.0
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.8e-43 180.3 128 69.5
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 3.6e-39 166.0 163 54.0
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 1.6e-36 157.1 122 63.9
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.7e-33 147.1 93 74.2
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.3e-28 131.0 92 71.7
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 9.1e-27 124.8 61 96.7
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.3e-25 120.9 86 70.9
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 8.5e-25 118.2 71 73.2
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 6.1e-23 112.1 120 59.2
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 1.7e-20 104.0 55 81.8
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.1e-16 91.3 69 68.1
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 5.2e-14 82.4 152 33.6
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 2.0e-10 70.5 65 55.4


User provided reference genes

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