Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 9.1e-237 823.2 408 100.0
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 2.6e-236 821.6 408 99.8
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 4.5e-236 820.8 408 99.8
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 7.0e-213 743.8 408 90.2
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 8.8e-208 726.9 403 90.6
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 1.1e-197 693.3 416 82.0
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 4.5e-196 688.0 411 82.7
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 8.6e-195 683.7 414 82.6
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.8e-193 678.7 414 82.1
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 1.5e-191 672.9 415 81.7
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 2.0e-191 672.5 417 80.8
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 2.6e-191 672.2 415 81.7
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.7e-190 669.5 411 81.8
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 1.9e-189 666.0 415 80.5
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 2.4e-189 665.6 418 78.9
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 7.8e-188 660.6 438 77.4
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 6.6e-187 657.5 411 79.3
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 8.6e-187 657.1 411 79.1
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 1.9e-186 656.0 417 79.1
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 3.3e-186 655.2 416 79.1
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 1.2e-185 653.3 416 78.6
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 8.3e-182 640.6 417 77.2
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 1.9e-181 639.4 419 77.8
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 5.4e-181 637.9 424 75.2
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 1.6e-180 636.3 413 76.5
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 2.7e-180 635.6 413 76.5
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 3.5e-180 635.2 419 78.5
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 3.5e-180 635.2 420 76.9
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 1.0e-179 633.6 419 77.6
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 1.7e-179 632.9 414 76.3
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 2.3e-179 632.5 419 77.6
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 3.0e-179 632.1 419 77.3
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 1.1e-178 630.2 417 77.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.5e-178 629.0 419 76.4
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 4.3e-178 628.2 425 76.9
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 4.7e-177 624.8 418 75.1
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 3.1e-176 622.1 408 76.0
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 3.7e-174 615.1 410 75.1
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 7.1e-173 610.9 415 72.5
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 4.6e-172 608.2 411 73.7
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 1.0e-171 607.1 420 74.0
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 2.3e-171 605.9 419 73.7
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 2.3e-171 605.9 410 73.2
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 3.0e-171 605.5 408 74.8
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 1.5e-170 603.2 409 74.8
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 1.6e-169 599.7 413 74.6
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 8.1e-169 597.4 414 74.4
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 1.4e-168 596.7 415 71.3
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.8e-168 596.3 409 73.6
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 6.8e-168 594.3 418 74.2
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 8.9e-168 594.0 415 70.1
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.0e-167 592.8 422 71.3
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 5.8e-167 591.3 415 70.4
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 9.9e-167 590.5 416 70.2
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 1.3e-166 590.1 415 70.4
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 6.4e-166 587.8 415 69.6
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 8.4e-166 587.4 416 69.7
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 1.2e-164 583.6 408 72.3
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 3.0e-163 578.9 414 70.0
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 3.0e-163 578.9 408 72.5
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 3.9e-163 578.6 416 70.0
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 6.6e-163 577.8 416 69.7
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 8.7e-163 577.4 413 70.2
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 8.7e-163 577.4 413 70.2
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 8.7e-163 577.4 413 70.2
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 4.3e-162 575.1 416 70.7
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 4.3e-162 575.1 413 72.2
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 2.8e-161 572.4 410 72.9
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 1.3e-158 563.5 412 69.4
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 2.2e-158 562.8 408 69.4
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 1.9e-157 559.7 419 68.5
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 1.7e-155 553.1 420 67.6
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 5.6e-154 548.1 414 70.0
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 4.5e-151 538.5 407 68.8
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 1.3e-150 537.0 410 66.8
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 1.7e-150 536.6 410 66.6
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 1.7e-150 536.6 410 66.6
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 9.3e-149 530.8 415 66.3
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 9.3e-149 530.8 421 66.3
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.0e-147 525.8 422 65.6
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 8.7e-147 524.2 418 66.0
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 1.1e-146 523.9 414 66.2
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.3e-145 520.4 406 68.2
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 6.2e-145 518.1 408 68.4
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 8.1e-145 517.7 379 69.4
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 2.4e-144 516.2 410 66.8
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 3.4e-143 512.3 400 67.5
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 5.8e-143 511.5 411 66.2
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 9.9e-143 510.8 409 67.5
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 1.1e-141 507.3 412 66.3
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 2.3e-139 499.6 482 58.1
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 4.5e-135 485.3 397 64.7
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.9e-134 482.6 363 68.0
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 2.8e-129 466.1 408 62.7
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 2.7e-124 449.5 408 60.0
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 2.2e-121 439.9 258 84.9
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 2.9e-118 429.5 471 50.5
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 3.6e-116 422.5 257 82.1
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 4.5e-111 405.6 261 77.8
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 2.6e-106 389.8 241 82.2
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 3.5e-103 379.4 297 68.7
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 4.2e-101 372.5 466 45.7
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 7.5e-98 361.7 415 50.4
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.4e-96 356.7 250 74.0
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 9.4e-93 344.7 414 49.0
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 1.4e-91 340.9 469 43.7
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 4.0e-83 312.8 288 59.7
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 9.5e-77 291.6 431 41.3
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 2.9e-73 280.0 184 77.7
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 4.3e-45 186.4 165 51.5
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 1.7e-38 164.5 188 48.4
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 1.5e-37 161.4 191 49.7
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 4.3e-37 159.8 476 27.3
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 4.8e-36 156.4 495 26.5
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 9.0e-35 152.1 437 29.3
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 5.4e-32 142.9 110 61.8
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 1.7e-25 121.3 108 57.4
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 6.5e-25 119.4 70 81.4
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 1.1e-24 118.6 98 63.3
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 8.7e-14 82.4 113 43.4


User provided reference genes

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