Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre16.g672350 Chlamydomonas reinhardtii HOM05D000001 ORTHO05D002182 0.0e+00 2401.3 1544 100.0
AUR62002658 Chenopodium quinoa HOM05D000001 ORTHO05D002182 3.1e-11 75.9 139 34.5
AUR62030126 Chenopodium quinoa HOM05D000001 ORTHO05D002182 4.5e-10 72.0 139 33.1
EL10Ac8g19611 Beta vulgaris HOM05D000001 ORTHO05D002182 5.8e-10 71.6 130 32.3
ATR1098G120 Amborella trichopoda HOM05D000001 ORTHO05D002182 1.0e-09 70.9 154 31.2
Mapoly0103s0079 Marchantia polymorpha HOM05D000001 ORTHO05D002182 2.9e-09 69.3 180 32.2
Nn1g02904 Nelumbo nucifera HOM05D000001 ORTHO05D002182 2.9e-09 69.3 144 32.6
Nn4g24186 Nelumbo nucifera HOM05D000001 ORTHO05D002182 3.8e-09 68.9 144 32.6
TAR362G1208 Trochodendron aralioides HOM05D000001 ORTHO05D002182 3.8e-09 68.9 148 33.1
Manes.13G037400 Manihot esculenta HOM05D000001 ORTHO05D002182 1.1e-08 67.4 154 33.8
RcHm_v2.0_Chr5g0015091 Rosa chinensis HOM05D000001 ORTHO05D002182 1.1e-08 67.4 135 31.9
SEGI_28504 Sequoiadendron giganteum HOM05D000001 ORTHO05D002182 1.9e-08 66.6 118 33.9
Zm00001eb292490 Zea mays HOM05D000001 ORTHO05D002182 1.9e-08 66.6 151 31.8
Hund21554 Selenicereus undatus HOM05D000001 ORTHO05D002182 2.5e-08 66.2 126 31.7
Aa31LG6G3120 Aethionema arabicum HOM05D000001 ORTHO05D002182 3.2e-08 65.9 125 31.2
FAN11G1988 Fragaria x ananassa HOM05D000001 ORTHO05D002182 3.2e-08 65.9 135 30.4
FAN16G2122 Fragaria x ananassa HOM05D000001 ORTHO05D002182 3.2e-08 65.9 135 30.4
FAN21G2407 Fragaria x ananassa HOM05D000001 ORTHO05D002182 3.2e-08 65.9 135 30.4
MD10G1256100 Malus domestica HOM05D000001 ORTHO05D002182 3.2e-08 65.9 133 31.6
PSO063G3931 Papaver somniferum HOM05D000001 ORTHO05D002182 4.2e-08 65.5 148 32.4
Prupe.4G087500 Prunus persica HOM05D000001 ORTHO05D002182 4.2e-08 65.5 133 30.8
Sc17g0004770 Simmondsia chinensis HOM05D000001 ORTHO05D002182 4.2e-08 65.5 140 30.7
Zm00001eb077450 Zea mays HOM05D000001 ORTHO05D002182 4.2e-08 65.5 156 28.8
Carub.0007s2036 Capsella rubella HOM05D000001 ORTHO05D002182 5.5e-08 65.1 131 30.5
PSO782G4898 Papaver somniferum HOM05D000001 ORTHO05D002182 5.5e-08 65.1 145 31.0
FvH4_3g09510 Fragaria vesca HOM05D000001 ORTHO05D002182 7.1e-08 64.7 135 30.4
MD05G1060000 Malus domestica HOM05D000001 ORTHO05D002182 9.3e-08 64.3 133 31.6
unitig_37.g12084 Utricularia gibba HOM05D000001 ORTHO05D002182 1.2e-07 63.9 129 30.2
Aqoxy2G03717 Aquilegia oxysepala HOM05D000001 ORTHO05D002182 1.6e-07 63.5 149 28.9
Migut.M01869 Erythranthe guttata HOM05D000001 ORTHO05D002182 2.7e-07 62.8 125 29.6
Os04g0512400 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D002182 3.5e-07 62.4 156 27.6
FAN25G3090 Fragaria x ananassa HOM05D000001 ORTHO05D002182 4.6e-07 62.0 122 31.1
AagrBONN_evm.TU.Sc2ySwM_368.556 Anthoceros agrestis HOM05D000001 ORTHO05D002182 6.0e-07 61.6 167 31.1
MELO3C007093.2 Cucumis melo HOM05D000001 ORTHO05D002182 6.0e-07 61.6 129 29.5
CsaV3_6G052190 Cucumis sativus L. HOM05D000001 ORTHO05D002182 6.0e-07 61.6 129 29.5
EL10Ac7g17663 Beta vulgaris HOM05D000001 ORTHO05D002182 7.9e-07 61.2 158 28.5
Lsat_1_v5_gn_2_90841 Lactuca sativa HOM05D000001 ORTHO05D002182 7.9e-07 61.2 117 35.9
PSO017G0462 Papaver somniferum HOM05D000001 ORTHO05D002182 7.9e-07 61.2 115 30.4
Prupe.8G218500 Prunus persica HOM05D000001 ORTHO05D002182 7.9e-07 61.2 114 35.1
HPP92_008544 Vanilla planifolia HOM05D000001 ORTHO05D002182 7.9e-07 61.2 117 30.8
Lsat_1_v5_gn_2_90941 Lactuca sativa HOM05D000001 ORTHO05D002182 1.0e-06 60.8 116 33.6
Potri.001G358100 Populus trichocarpa HOM05D000001 ORTHO05D002182 1.0e-06 60.8 125 30.4
Sed0027382 Sechium edule HOM05D000001 ORTHO05D002182 1.0e-06 60.8 132 31.8
Sabra16G0235800 Salix brachista HOM05D000001 ORTHO05D002182 1.8e-06 60.1 125 29.6
AL7G33060 Arabidopsis lyrata HOM05D000001 ORTHO05D002182 2.3e-06 59.7 115 31.3
Actinidia23089 Actinidia chinensis HOM05D000001 ORTHO05D002182 3.0e-06 59.3 133 30.8
Rhsim01G0261400 Rhododendron simsii HOM05D000001 ORTHO05D002182 3.0e-06 59.3 158 30.4
Sopen05g012900 Solanum pennellii HOM05D000001 ORTHO05D002182 3.0e-06 59.3 160 32.5
AT4G21070 Arabidopsis thaliana HOM05D000001 ORTHO05D002182 3.9e-06 58.9 128 29.7
MSTRG.21471 Avicennia marina HOM05D000001 ORTHO05D002182 3.9e-06 58.9 123 33.3
Ciclev10019112m.g Citrus clementina HOM05D000001 ORTHO05D002182 3.9e-06 58.9 152 29.6
FvH4_2g20860 Fragaria vesca HOM05D000001 ORTHO05D002182 3.9e-06 58.9 114 32.5
MBI10_g19239_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D002182 3.9e-06 58.9 153 30.1
CSS0015436 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D002182 5.1e-06 58.5 154 29.9
CSS0030645 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D002182 5.1e-06 58.5 154 29.9
AUR62025461 Chenopodium quinoa HOM05D000001 ORTHO05D002182 5.1e-06 58.5 154 31.2
Gohir.A01G128300 Gossypium hirsutum HOM05D000001 ORTHO05D002182 5.1e-06 58.5 129 29.5
Gorai.002G141900 Gossypium raimondii HOM05D000001 ORTHO05D002182 5.1e-06 58.5 129 29.5
Potri.002G259000 Populus trichocarpa HOM05D000001 ORTHO05D002182 5.1e-06 58.5 117 32.5
Haze_24678 Corylus avellana HOM05D000001 ORTHO05D002182 6.7e-06 58.2 154 28.6
FAN15G1101 Fragaria x ananassa HOM05D000001 ORTHO05D002182 6.7e-06 58.2 114 32.5
AUR62008777 Chenopodium quinoa HOM05D000001 ORTHO05D002182 8.7e-06 57.8 154 31.2
Lj1C72G5 Lonicera japonica HOM05D000001 ORTHO05D002182 8.7e-06 57.8 116 31.9
Hund05474 Selenicereus undatus HOM05D000001 ORTHO05D002182 8.7e-06 57.8 143 28.7
Sc17g0002630 Simmondsia chinensis HOM05D000001 ORTHO05D002182 8.7e-06 57.8 154 27.9


User provided reference genes

Program Settings