Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 1.2e-139 500.0 280 100.0
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 2.4e-55 219.9 181 63.0
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 6.6e-45 185.3 181 51.9
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.5e-44 184.1 180 54.4
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 4.3e-44 182.6 184 50.0
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 2.8e-43 179.9 181 50.8
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 3.6e-43 179.5 187 49.7
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.7e-43 179.1 181 50.8
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.7e-43 179.1 181 50.8
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 6.1e-43 178.7 184 49.5
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.0e-42 177.9 186 50.0
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 1.0e-42 177.9 181 51.4
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.4e-42 177.6 186 50.5
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 1.4e-42 177.6 191 48.7
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 1.8e-42 177.2 183 50.3
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 2.3e-42 176.8 187 49.2
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 3.1e-42 176.4 182 50.5
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 4.0e-42 176.0 187 48.7
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 4.0e-42 176.0 188 47.3
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 4.0e-42 176.0 186 48.9
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 5.2e-42 175.6 181 50.8
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 5.2e-42 175.6 188 47.9
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 5.2e-42 175.6 187 49.2
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 6.8e-42 175.3 181 49.7
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 8.9e-42 174.9 187 48.7
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 8.9e-42 174.9 182 49.5
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 8.9e-42 174.9 177 52.0
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 8.9e-42 174.9 179 53.1
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 8.9e-42 174.9 181 50.3
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 1.2e-41 174.5 183 49.2
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 1.2e-41 174.5 188 48.4
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 2.0e-41 173.7 187 48.7
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 2.0e-41 173.7 182 50.0
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.6e-41 173.3 181 49.7
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 2.6e-41 173.3 181 49.2
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 3.4e-41 172.9 184 49.5
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 3.4e-41 172.9 186 48.9
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 3.4e-41 172.9 186 48.9
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 4.4e-41 172.6 186 50.0
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 4.4e-41 172.6 181 48.6
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 5.8e-41 172.2 182 48.9
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 5.8e-41 172.2 187 48.1
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 5.8e-41 172.2 187 48.1
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 5.8e-41 172.2 181 49.7
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 5.8e-41 172.2 181 49.7
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 7.5e-41 171.8 181 49.2
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 7.5e-41 171.8 184 48.9
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 9.8e-41 171.4 181 50.8
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 9.8e-41 171.4 186 48.9
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 1.7e-40 170.6 185 49.2
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 2.2e-40 170.2 182 48.4
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 2.2e-40 170.2 188 47.9
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 2.9e-40 169.9 182 47.8
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 3.7e-40 169.5 181 48.6
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 4.9e-40 169.1 184 48.4
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 4.9e-40 169.1 186 47.8
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 8.3e-40 168.3 181 48.1
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 8.3e-40 168.3 181 48.6
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 1.1e-39 167.9 181 48.6
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 1.1e-39 167.9 185 48.1
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 1.4e-39 167.5 181 49.2
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 1.4e-39 167.5 187 47.6
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 1.4e-39 167.5 181 47.5
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 1.4e-39 167.5 181 48.6
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.9e-39 167.2 184 47.8
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 2.4e-39 166.8 181 47.0
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 2.4e-39 166.8 178 48.9
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 4.1e-39 166.0 181 48.1
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 4.1e-39 166.0 181 47.5
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 5.4e-39 165.6 187 47.1
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 5.4e-39 165.6 181 49.2
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 7.0e-39 165.2 186 46.8
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 9.2e-39 164.9 181 48.1
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 9.2e-39 164.9 181 48.1
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 9.2e-39 164.9 181 48.1
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 9.2e-39 164.9 181 48.1
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 9.2e-39 164.9 181 47.5
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 9.2e-39 164.9 181 48.1
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 1.2e-38 164.5 181 48.1
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.6e-38 164.1 181 48.1
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 2.0e-38 163.7 181 48.1
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 2.7e-38 163.3 181 48.1
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 3.5e-38 162.9 178 47.8
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 3.5e-38 162.9 178 47.8
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 3.5e-38 162.9 178 47.8
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 4.6e-38 162.5 178 47.8
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 4.6e-38 162.5 181 47.5
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 6.0e-38 162.2 213 43.2
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 7.8e-38 161.8 181 47.5
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 1.0e-37 161.4 178 47.8
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 1.7e-37 160.6 171 48.5
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 1.7e-37 160.6 175 49.7
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 5.2e-34 149.1 205 42.4
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 8.9e-34 148.3 178 45.5
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 2.9e-32 143.3 162 46.9
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 1.4e-31 141.0 186 43.0
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.4e-31 140.2 184 44.0
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 8.6e-29 131.7 190 38.4
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 4.3e-28 129.4 170 42.9
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 7.3e-28 128.6 148 46.6
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 3.4e-25 119.8 181 39.8
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 4.4e-25 119.4 121 50.4
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 1.7e-24 117.5 143 44.1
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 2.1e-22 110.5 104 54.8
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 2.7e-22 110.2 110 49.1
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 6.0e-22 109.0 118 46.6
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 1.3e-21 107.8 108 50.9
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 2.3e-21 107.1 115 47.0
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 3.9e-21 106.3 118 46.6
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 3.9e-21 106.3 125 45.6
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 6.6e-21 105.5 110 50.0
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 1.5e-20 104.4 164 39.0
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 1.6e-19 100.9 104 48.1
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 6.6e-13 79.0 168 33.9
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 7.6e-09 65.5 191 25.7
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 4.9e-08 62.8 193 26.9
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 8.4e-08 62.0 43 65.1
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 2.1e-06 57.4 49 53.1


User provided reference genes

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