Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre12.g485750 Chlamydomonas reinhardtii HOM05D006654 ORTHO05D008201 1.0e-134 483.4 244 100.0
FAN03G1885 Fragaria x ananassa HOM05D006654 ORTHO05D008201 1.9e-40 170.2 234 39.3
MCO06G092 Micromonas commoda HOM05D006654 ORTHO05D008201 2.5e-40 169.9 242 38.8
FAN10G2487 Fragaria x ananassa HOM05D006654 ORTHO05D008201 4.2e-40 169.1 234 38.9
FAN01G0962 Fragaria x ananassa HOM05D006654 ORTHO05D008201 5.5e-40 168.7 234 38.9
FAN06G4528 Fragaria x ananassa HOM05D006654 ORTHO05D008201 5.5e-40 168.7 234 38.9
Ca_11428_v3 Cicer arietinum L. HOM05D006654 ORTHO05D008201 7.2e-40 168.3 234 39.7
FAN01G2458 Fragaria x ananassa HOM05D006654 ORTHO05D008201 9.5e-40 167.9 234 38.5
FvH4_7g00630 Fragaria vesca HOM05D006654 ORTHO05D008201 1.6e-39 167.2 234 38.5
Oeu023486.1 Olea europaea HOM05D006654 ORTHO05D008201 2.8e-39 166.4 231 40.7
CANSAT80G1342 Cannabis sativa HOM05D006654 ORTHO05D008201 3.6e-39 166.0 234 39.7
Glyma.20G249100 Glycine max HOM05D006654 ORTHO05D008201 3.6e-39 166.0 234 39.3
TPR.G39480 Trifolium pratense HOM05D006654 ORTHO05D008201 4.7e-39 165.6 234 39.3
RcHm_v2.0_Chr1g0314831 Rosa chinensis HOM05D006654 ORTHO05D008201 8.0e-39 164.9 234 39.3
Lj5g0001059 Lotus japonicus HOM05D006654 ORTHO05D008201 3.0e-38 162.9 234 38.5
Rhsim12G0173900 Rhododendron simsii HOM05D006654 ORTHO05D008201 5.2e-38 162.2 234 38.9
SGA_v2.0_scaffold161G37776 Striga asiatica HOM05D006654 ORTHO05D008201 5.2e-38 162.2 231 38.1
CiPaw.12G042200 Carya illinoinensis HOM05D006654 ORTHO05D008201 6.8e-38 161.8 234 37.6
TWI23G1026 Tripterygium wilfordii HOM05D006654 ORTHO05D008201 6.8e-38 161.8 234 37.2
Haze_07229 Corylus avellana HOM05D006654 ORTHO05D008201 8.9e-38 161.4 234 38.9
Actinidia08864 Actinidia chinensis HOM05D006654 ORTHO05D008201 1.2e-37 161.0 234 37.6
arahy.Tifrunner.gnm1.ann1.S79YT6 Arachis hypogaea HOM05D006654 ORTHO05D008201 1.2e-37 161.0 234 38.0
EL10As4g23406 Beta vulgaris HOM05D006654 ORTHO05D008201 1.2e-37 161.0 231 39.8
Migut.I00498 Erythranthe guttata HOM05D006654 ORTHO05D008201 1.2e-37 161.0 231 38.5
Mapoly0061s0139 Marchantia polymorpha HOM05D006654 ORTHO05D008201 1.2e-37 161.0 229 38.9
Pp3c22_11190 Physcomitrium patens HOM05D006654 ORTHO05D008201 1.2e-37 161.0 229 39.3
Pp3c22_11201 Physcomitrium patens HOM05D006654 ORTHO05D008201 1.2e-37 161.0 229 39.3
Phvul.007G001300 Phaseolus vulgaris HOM05D006654 ORTHO05D008201 1.5e-37 160.6 234 38.5
Manes.14G052100 Manihot esculenta HOM05D006654 ORTHO05D008201 2.6e-37 159.8 234 37.2
Gorai.003G121200 Gossypium raimondii HOM05D006654 ORTHO05D008201 4.4e-37 159.1 234 37.6
Hma1.2p1_0014F.1_g009560 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 5.7e-37 158.7 234 37.6
Prupe.4G287600 Prunus persica HOM05D006654 ORTHO05D008201 5.7e-37 158.7 234 38.5
Sc10g0010430 Simmondsia chinensis HOM05D006654 ORTHO05D008201 5.7e-37 158.7 234 38.5
MD02G1316100 Malus domestica HOM05D006654 ORTHO05D008201 7.5e-37 158.3 234 38.0
Manes.06G118600 Manihot esculenta HOM05D006654 ORTHO05D008201 7.5e-37 158.3 234 36.8
CSS0035351 Camellia sinensis var. sinensis HOM05D006654 ORTHO05D008201 9.8e-37 157.9 234 38.0
AUR62029635 Chenopodium quinoa HOM05D006654 ORTHO05D008201 9.8e-37 157.9 234 37.6
MBI07_g34629_MAGBIO Magnolia biondii HOM05D006654 ORTHO05D008201 9.8e-37 157.9 234 37.2
Potri.015G094300 Populus trichocarpa HOM05D006654 ORTHO05D008201 9.8e-37 157.9 231 38.5
BcaC01g02588 Brassica carinata HOM05D006654 ORTHO05D008201 1.3e-36 157.5 231 36.8
ClCG03G003720 Citrullus lanatus HOM05D006654 ORTHO05D008201 1.3e-36 157.5 234 38.0
CsaV3_1G009610 Cucumis sativus L. HOM05D006654 ORTHO05D008201 1.3e-36 157.5 234 38.0
SMO364G0616 Selaginella moellendorffii HOM05D006654 ORTHO05D008201 1.3e-36 157.5 229 36.2
GSVIVG01008527001 Vitis vinifera HOM05D006654 ORTHO05D008201 1.3e-36 157.5 234 38.0
ECA232G0809 Erigeron canadensis HOM05D006654 ORTHO05D008201 1.7e-36 157.1 234 38.9
MD07G1005800 Malus domestica HOM05D006654 ORTHO05D008201 1.7e-36 157.1 234 37.6
QL10p003811 Quercus lobata HOM05D006654 ORTHO05D008201 1.7e-36 157.1 234 37.2
Thecc.03G127500 Theobroma cacao HOM05D006654 ORTHO05D008201 1.7e-36 157.1 234 37.2
Aqoxy5G03402 Aquilegia oxysepala HOM05D006654 ORTHO05D008201 2.8e-36 156.4 234 37.2
Os07g0295200 Oryza sativa ssp. japonica HOM05D006654 ORTHO05D008201 2.8e-36 156.4 234 37.2
Aa31LG1G18600 Aethionema arabicum HOM05D006654 ORTHO05D008201 3.7e-36 156.0 234 36.3
Eucgr.F01379 Eucalyptus grandis HOM05D006654 ORTHO05D008201 3.7e-36 156.0 234 37.2
Thhalv10004858m.g Eutrema salsugineum HOM05D006654 ORTHO05D008201 3.7e-36 156.0 231 36.4
Nn4g22349 Nelumbo nucifera HOM05D006654 ORTHO05D008201 3.7e-36 156.0 234 36.8
Potri.012G096500 Populus trichocarpa HOM05D006654 ORTHO05D008201 3.7e-36 156.0 234 38.0
AL8G40500 Arabidopsis lyrata HOM05D006654 ORTHO05D008201 4.9e-36 155.6 231 36.8
Carub.0008s2414 Capsella rubella HOM05D006654 ORTHO05D008201 4.9e-36 155.6 231 36.8
SEGI_01164 Sequoiadendron giganteum HOM05D006654 ORTHO05D008201 6.3e-36 155.2 229 36.7
AT5G63440 Arabidopsis thaliana HOM05D006654 ORTHO05D008201 8.3e-36 154.8 231 36.8
TAR371G0211 Trochodendron aralioides HOM05D006654 ORTHO05D008201 8.3e-36 154.8 234 37.2
HPP92_000346 Vanilla planifolia HOM05D006654 ORTHO05D008201 1.1e-35 154.5 234 35.9
Pp3c18_15000 Physcomitrium patens HOM05D006654 ORTHO05D008201 1.4e-35 154.1 229 37.6
vmacro16672 Vaccinium macrocarpon HOM05D006654 ORTHO05D008201 1.4e-35 154.1 221 38.9
Nitab4.5_0004750g0080 Nicotiana tabacum HOM05D006654 ORTHO05D008201 1.8e-35 153.7 231 36.4
Lsat_1_v5_gn_4_76920 Lactuca sativa HOM05D006654 ORTHO05D008201 2.4e-35 153.3 234 38.0
Peaxi162Scf00089g00632 Petunia axillaris HOM05D006654 ORTHO05D008201 2.4e-35 153.3 231 36.4
Sp2g26520 Schrenkiella parvula HOM05D006654 ORTHO05D008201 2.4e-35 153.3 231 35.9
THA.LOC104818189 Tarenaya hassleriana HOM05D006654 ORTHO05D008201 3.1e-35 152.9 231 36.4
CAN.G352.15 Capsicum annuum HOM05D006654 ORTHO05D008201 4.1e-35 152.5 231 35.9
CARHR277290 Cardamine hirsuta HOM05D006654 ORTHO05D008201 4.1e-35 152.5 231 35.9
CDE05G1175 Ceratophyllum demersum HOM05D006654 ORTHO05D008201 5.4e-35 152.1 234 35.5
HanXRQChr16g0497681 Helianthus annuus HOM05D006654 ORTHO05D008201 5.4e-35 152.1 235 37.9
PGSC0003DMG402015240 Solanum tuberosum HOM05D006654 ORTHO05D008201 5.4e-35 152.1 231 35.9
Medtr1g117000 Medicago truncatula HOM05D001235 ORTHO05D005684 7.0e-35 151.8 222 38.7
Cc04_g10050 Coffea canephora HOM05D006654 ORTHO05D008201 9.2e-35 151.4 231 36.8
Nitab4.5_0003282g0120 Nicotiana tabacum HOM05D006654 ORTHO05D008201 1.2e-34 151.0 231 35.9
PGR083G1205 Punica granatum HOM05D006654 ORTHO05D008201 1.2e-34 151.0 234 37.2
Solyc03g111330.4 Solanum lycopersicum HOM05D006654 ORTHO05D008201 1.6e-34 150.6 231 35.9
ATR0561G261 Amborella trichopoda HOM05D006654 ORTHO05D008201 2.7e-34 149.8 221 36.2
Cpa.g.sc13.133 Carica papaya HOM05D006654 ORTHO05D008201 2.7e-34 149.8 217 37.3
arahy.Tifrunner.gnm1.ann1.653AWM Arachis hypogaea HOM05D006654 ORTHO05D008201 3.5e-34 149.4 221 37.1
VMungo0720G2310 Vigna mungo HOM05D006654 ORTHO05D008201 5.9e-34 148.7 260 35.8
PSO063G4350 Papaver somniferum HOM05D006654 ORTHO05D008201 2.3e-33 146.7 234 36.3
PSO782G1240 Papaver somniferum HOM05D006654 ORTHO05D008201 2.3e-33 146.7 234 36.3
Lalb_Chr06g0164681 Lupinus albus HOM05D006654 ORTHO05D008201 7.3e-32 141.7 229 35.4
Duzib068G1280 Durio zibethinus HOM05D006654 ORTHO05D008201 6.1e-31 138.7 234 35.5
Oeu044257.1 Olea europaea HOM05D006654 ORTHO05D008201 1.8e-30 137.1 298 31.5
Atru.BG.190.p Acer truncatum HOM05D006654 ORTHO05D008201 2.3e-30 136.7 202 38.6
MELO3C002357.2 Cucumis melo HOM05D006654 ORTHO05D008201 2.6e-29 133.3 246 34.1
Zm00001eb305410 Zea mays HOM05D006654 ORTHO05D008201 2.9e-28 129.8 195 36.4
Gohir.A03G052100 Gossypium hirsutum HOM05D006654 ORTHO05D008201 3.7e-28 129.4 194 37.6
Hma1.2p1_0014F.1_g009570 Hydrangea macrophylla HOM05D006654 ORTHO05D008201 6.4e-28 128.6 194 37.1
Ca_29862_v3 Cicer arietinum L. HOM05D006654 ORTHO05D008201 1.4e-27 127.5 190 37.9
COL.COLO4_28092 Corchorus olitorius HOM05D006654 ORTHO05D008201 1.9e-27 127.1 190 37.4
Dinv11162 Davidia involucrata HOM05D006654 ORTHO05D008201 9.2e-27 124.8 206 36.9
Sopen03g030460 Solanum pennellii HOM05D006654 ORTHO05D008201 3.5e-26 122.9 194 34.5
Ciclev10021838m.g Citrus clementina HOM05D006654 ORTHO05D008201 7.8e-26 121.7 191 35.6
Nn3g16497 Nelumbo nucifera HOM05D006654 ORTHO05D008201 1.3e-25 120.9 195 33.8
A06p30050 Brassica napus HOM05D001045 ORTHO05D004836 8.6e-25 118.2 188 34.6
BraA06t25957Z Brassica rapa HOM05D001045 ORTHO05D004836 8.6e-25 118.2 188 34.6
Gohir.D03G115000 Gossypium hirsutum HOM05D006654 ORTHO05D008201 1.1e-24 117.9 193 35.2
Psat6g243960 Pisum sativum HOM05D006654 ORTHO05D008201 1.5e-24 117.5 163 40.5
Prupe.1G190000 Prunus persica HOM05D006654 ORTHO05D008201 1.5e-24 117.5 190 35.8
Sed0016483 Sechium edule HOM05D006654 ORTHO05D008201 1.9e-24 117.1 190 34.7
C03p63160 Brassica napus HOM05D001045 ORTHO05D004836 2.5e-24 116.7 188 34.0
BolC3t18571H Brassica oleracea HOM05D001045 ORTHO05D004836 2.5e-24 116.7 188 34.0
PRCOL_00005389 Prasinoderma coloniale HOM05D006654 ORTHO05D008201 1.6e-23 114.0 259 30.1
Sabra15G0115700 Salix brachista HOM05D006654 ORTHO05D008201 5.2e-22 109.0 179 34.6
CBR_g21852 Chara braunii HOM05D006654 ORTHO05D008201 3.4e-21 106.3 164 32.9
Lj9A478G90 Lonicera japonica HOM05D006654 ORTHO05D008201 2.1e-18 97.1 188 33.5
AagrBONN_evm.TU.Sc2ySwM_228.2755 Anthoceros agrestis HOM05D006654 ORTHO05D008201 2.3e-17 93.6 120 40.0
AUR62025924 Chenopodium quinoa HOM05D006654 ORTHO05D008201 6.2e-15 85.5 124 37.1
MSTRG.4601 Avicennia marina HOM05D006654 ORTHO05D008201 1.8e-14 84.0 138 35.5
SalBow1G2859 Salvia bowleyana HOM05D006654 ORTHO05D008201 2.0e-13 80.5 98 40.8
SalBow1G7869 Salvia bowleyana HOM05D006654 ORTHO05D008201 2.0e-13 80.5 98 40.8
C09p09330 Brassica napus HOM05D006654 ORTHO05D008201 4.4e-13 79.3 131 33.6
BolC9t53845H Brassica oleracea HOM05D006654 ORTHO05D008201 4.4e-13 79.3 131 33.6
Hund10171 Selenicereus undatus HOM05D006654 ORTHO05D008201 5.8e-13 79.0 183 27.3
BcaC04g23328 Brassica carinata HOM05D006654 ORTHO05D008201 1.7e-12 77.4 126 32.5
Prupe.2G008500 Prunus persica HOM05D006654 ORTHO05D008201 3.9e-09 66.2 86 38.4


User provided reference genes

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