Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre11.g475450 Chlamydomonas reinhardtii HOM05D005750 ORTHO05D007126 1.1e-163 580.5 445 100.0
CBR_g865 Chara braunii HOM05D005750 ORTHO05D007126 1.5e-51 208.0 238 48.7
MBI14_g32934_MAGBIO Magnolia biondii HOM05D005750 ORTHO05D007126 1.1e-46 191.8 209 48.3
SEGI_00199 Sequoiadendron giganteum HOM05D005750 ORTHO05D007126 2.5e-46 190.7 225 44.0
Ah.11g045300 Amaranthus hybridus HOM05D005750 ORTHO05D007126 4.2e-46 189.9 190 50.0
Os01g0851400 Oryza sativa ssp. japonica HOM05D005750 ORTHO05D007126 4.2e-46 189.9 206 47.6
Zm00001eb367490 Zea mays HOM05D005750 ORTHO05D007126 4.2e-46 189.9 201 49.8
PSO384G4196 Papaver somniferum HOM05D005750 ORTHO05D007126 7.2e-46 189.1 195 49.2
CiPaw.09G205200 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.2e-45 188.3 195 50.3
PSO339G6575 Papaver somniferum HOM05D005750 ORTHO05D007126 1.2e-45 188.3 210 46.7
EL10Ac5g11550 Beta vulgaris HOM05D005750 ORTHO05D007126 1.6e-45 188.0 188 50.0
SGA_v2.0_scaffold240G44116 Striga asiatica HOM05D005750 ORTHO05D007126 1.6e-45 188.0 236 43.6
CSS0046643 Camellia sinensis var. sinensis HOM05D005750 ORTHO05D007126 2.1e-45 187.6 206 47.1
Peaxi162Scf00014g00091 Petunia axillaris HOM05D005750 ORTHO05D007126 2.1e-45 187.6 207 45.9
CDE02G4717 Ceratophyllum demersum HOM05D005750 ORTHO05D007126 2.7e-45 187.2 214 45.8
AUR62042943 Chenopodium quinoa HOM05D005750 ORTHO05D007126 2.7e-45 187.2 204 47.5
HanXRQChr16g0510541 Helianthus annuus HOM05D005750 ORTHO05D007126 2.7e-45 187.2 191 50.8
Lsat_1_v5_gn_8_99481 Lactuca sativa HOM05D005750 ORTHO05D007126 3.6e-45 186.8 195 49.7
Lalb_Chr07g0193351 Lupinus albus HOM05D005750 ORTHO05D007126 3.6e-45 186.8 188 50.0
Pp3c7_8520 Physcomitrium patens HOM05D005750 ORTHO05D007126 3.6e-45 186.8 209 47.8
Sed0027096 Sechium edule HOM05D005750 ORTHO05D007126 3.6e-45 186.8 192 50.5
arahy.Tifrunner.gnm1.ann1.CU0EG8 Arachis hypogaea HOM05D005750 ORTHO05D007126 4.7e-45 186.4 194 49.5
ClCG10G021760 Citrullus lanatus HOM05D005750 ORTHO05D007126 6.1e-45 186.0 192 50.0
MELO3C009196.2 Cucumis melo HOM05D005750 ORTHO05D007126 6.1e-45 186.0 192 50.0
CsaV3_3G034210 Cucumis sativus L. HOM05D005750 ORTHO05D007126 6.1e-45 186.0 192 50.0
Prupe.6G269800 Prunus persica HOM05D005750 ORTHO05D007126 6.1e-45 186.0 209 46.9
Sopen10g036170 Solanum pennellii HOM05D005750 ORTHO05D007126 6.1e-45 186.0 200 47.5
Actinidia13787 Actinidia chinensis HOM05D005750 ORTHO05D007126 8.0e-45 185.7 190 50.0
Phvul.010G008000 Phaseolus vulgaris HOM05D005750 ORTHO05D007126 8.0e-45 185.7 189 50.3
DCAR_028833 Daucus carota HOM05D005750 ORTHO05D007126 1.0e-44 185.3 200 47.5
Lj2A78G34 Lonicera japonica HOM05D005750 ORTHO05D007126 1.0e-44 185.3 203 47.3
MD04G1146200 Malus domestica HOM05D005750 ORTHO05D007126 1.0e-44 185.3 209 46.9
vmacro20231 Vaccinium macrocarpon HOM05D005750 ORTHO05D007126 1.0e-44 185.3 202 47.5
VMungo0331G1407 Vigna mungo HOM05D005750 ORTHO05D007126 1.0e-44 185.3 189 49.7
Dinv37089 Davidia involucrata HOM05D005750 ORTHO05D007126 1.4e-44 184.9 216 45.8
Glyma.01G110900 Glycine max HOM05D005750 ORTHO05D007126 1.4e-44 184.9 189 49.7
TPR.G5219 Trifolium pratense HOM05D005750 ORTHO05D007126 1.4e-44 184.9 203 47.3
CAN.G351.8 Capsicum annuum HOM05D005750 ORTHO05D007126 1.8e-44 184.5 200 47.5
Nitab4.5_0000119g0240 Nicotiana tabacum HOM05D005750 ORTHO05D007126 1.8e-44 184.5 200 47.5
Psat7g247000 Pisum sativum HOM05D005750 ORTHO05D007126 1.8e-44 184.5 208 46.2
Medtr4g014710 Medicago truncatula HOM05D005750 ORTHO05D007126 2.3e-44 184.1 208 46.2
Atru.chr8.2137 Acer truncatum HOM05D005750 ORTHO05D007126 4.0e-44 183.3 237 43.0
Dinv35517 Davidia involucrata HOM05D005750 ORTHO05D007126 4.0e-44 183.3 203 47.3
Lj3g0021719 Lotus japonicus HOM05D005750 ORTHO05D007126 4.0e-44 183.3 208 46.6
Sc01g0006740 Simmondsia chinensis HOM05D005750 ORTHO05D007126 4.0e-44 183.3 187 49.2
arahy.Tifrunner.gnm1.ann1.2Q187C Arachis hypogaea HOM05D005750 ORTHO05D007126 5.2e-44 183.0 219 45.2
C08p29390 Brassica napus HOM05D005750 ORTHO05D007126 5.2e-44 183.0 193 49.2
BolC8t50540H Brassica oleracea HOM05D005750 ORTHO05D007126 5.2e-44 183.0 193 49.2
A09p47130 Brassica napus HOM05D005750 ORTHO05D007126 6.8e-44 182.6 193 49.2
BraA09t40175Z Brassica rapa HOM05D005750 ORTHO05D007126 6.8e-44 182.6 193 49.2
CANSAT35G0049 Cannabis sativa HOM05D005750 ORTHO05D007126 6.8e-44 182.6 195 48.7
Thhalv10010608m.g Eutrema salsugineum HOM05D005750 ORTHO05D007126 6.8e-44 182.6 194 49.0
MCO10G202 Micromonas commoda HOM05D005750 ORTHO05D007126 6.8e-44 182.6 238 42.9
SGA_v2.0_scaffold85G26769 Striga asiatica HOM05D005750 ORTHO05D007126 6.8e-44 182.6 196 47.4
THA.LOC104823389 Tarenaya hassleriana HOM05D005750 ORTHO05D007126 6.8e-44 182.6 198 48.5
AagrBONN_evm.TU.Sc2ySwM_344.3267 Anthoceros agrestis HOM05D005750 ORTHO05D007126 8.8e-44 182.2 211 46.9
AL5G35150 Arabidopsis lyrata HOM05D005750 ORTHO05D007126 8.8e-44 182.2 194 48.5
Carub.0005s2072 Capsella rubella HOM05D005750 ORTHO05D007126 8.8e-44 182.2 194 48.5
Eucgr.B02764 Eucalyptus grandis HOM05D005750 ORTHO05D007126 8.8e-44 182.2 194 48.5
unitig_46.g18409 Utricularia gibba HOM05D005750 ORTHO05D007126 8.8e-44 182.2 191 48.7
Aqoxy1G00732 Aquilegia oxysepala HOM05D005750 ORTHO05D007126 1.2e-43 181.8 200 46.5
Migut.J00232 Erythranthe guttata HOM05D005750 ORTHO05D007126 1.2e-43 181.8 200 47.5
TAR636G2178 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.2e-43 181.8 196 48.0
Zm00001eb147810 Zea mays HOM05D005750 ORTHO05D007126 1.2e-43 181.8 201 48.8
BcaB01g00216 Brassica carinata HOM05D005750 ORTHO05D007126 1.5e-43 181.4 193 49.2
Cc06_g01740 Coffea canephora HOM05D005750 ORTHO05D007126 1.5e-43 181.4 200 47.0
AT3G54130 Arabidopsis thaliana HOM05D005750 ORTHO05D007126 2.0e-43 181.0 210 46.7
MD12G1159400 Malus domestica HOM05D005750 ORTHO05D007126 2.0e-43 181.0 227 44.5
Hund15288 Selenicereus undatus HOM05D005750 ORTHO05D007126 2.0e-43 181.0 204 48.0
GSVIVG01034019001 Vitis vinifera HOM05D005750 ORTHO05D007126 2.0e-43 181.0 207 45.9
BcaC02g09095 Brassica carinata HOM05D005750 ORTHO05D007126 2.6e-43 180.6 212 45.8
C04p38380 Brassica napus HOM05D005750 ORTHO05D007126 2.6e-43 180.6 212 45.8
BolC4t25415H Brassica oleracea HOM05D005750 ORTHO05D007126 2.6e-43 180.6 212 45.8
Cpa.g.sc56.104 Carica papaya HOM05D005750 ORTHO05D007126 2.6e-43 180.6 199 46.7
PGR031G0365 Punica granatum HOM05D005750 ORTHO05D007126 2.6e-43 180.6 233 43.3
TWI74G1070 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 2.6e-43 180.6 228 44.7
FvH4_6g12170 Fragaria vesca HOM05D005750 ORTHO05D007126 3.4e-43 180.3 200 47.5
FAN09G4178 Fragaria x ananassa HOM05D005750 ORTHO05D007126 3.4e-43 180.3 200 47.5
FAN14G0046 Fragaria x ananassa HOM05D005750 ORTHO05D007126 3.4e-43 180.3 200 47.5
FAN14G1750 Fragaria x ananassa HOM05D005750 ORTHO05D007126 3.4e-43 180.3 200 47.5
Gorai.002G260600 Gossypium raimondii HOM05D005750 ORTHO05D007126 3.4e-43 180.3 196 47.4
Hma1.2p1_0763F.1_g214560 Hydrangea macrophylla HOM05D005750 ORTHO05D007126 3.4e-43 180.3 197 47.2
Thecc.05G023200 Theobroma cacao HOM05D005750 ORTHO05D007126 3.4e-43 180.3 193 48.2
CARHR164010 Cardamine hirsuta HOM05D005750 ORTHO05D007126 5.7e-43 179.5 213 45.1
FAN02G3889 Fragaria x ananassa HOM05D005750 ORTHO05D007126 5.7e-43 179.5 201 47.3
Sp5g08260 Schrenkiella parvula HOM05D005750 ORTHO05D007126 7.5e-43 179.1 212 45.8
Aa31sc171G20 Aethionema arabicum HOM05D005750 ORTHO05D007126 9.8e-43 178.7 197 47.2
BcaB02g08472 Brassica carinata HOM05D005750 ORTHO05D007126 9.8e-43 178.7 206 46.6
A04p05670 Brassica napus HOM05D005750 ORTHO05D007126 9.8e-43 178.7 195 47.2
Gohir.A01G224900 Gossypium hirsutum HOM05D005750 ORTHO05D007126 9.8e-43 178.7 196 46.9
Gohir.D01G214500 Gossypium hirsutum HOM05D005750 ORTHO05D007126 9.8e-43 178.7 196 46.9
RcHm_v2.0_Chr3g0463971 Rosa chinensis HOM05D005750 ORTHO05D007126 1.3e-42 178.3 200 47.0
TAR623G1708 Trochodendron aralioides HOM05D005750 ORTHO05D007126 1.7e-42 177.9 210 43.3
SMO203G0145 Selaginella moellendorffii HOM05D005750 ORTHO05D007126 2.2e-42 177.6 171 53.2
Potri.016G110300 Populus trichocarpa HOM05D005750 ORTHO05D007126 4.9e-42 176.4 211 44.1
QL07p036167 Quercus lobata HOM05D005750 ORTHO05D007126 8.3e-42 175.6 211 45.0
Ciclev10012396m.g Citrus clementina HOM05D005750 ORTHO05D007126 1.1e-41 175.3 239 42.3
Manes.09G101500 Manihot esculenta HOM05D005750 ORTHO05D007126 1.1e-41 175.3 207 44.9
MSTRG.26795 Avicennia marina HOM05D005750 ORTHO05D007126 1.4e-41 174.9 221 43.9
BraA04t16263Z Brassica rapa HOM05D005750 ORTHO05D007126 1.4e-41 174.9 195 47.2
Potri.006G095700 Populus trichocarpa HOM05D005750 ORTHO05D007126 1.4e-41 174.9 197 46.2
Duzib128G1738 Durio zibethinus HOM05D005750 ORTHO05D007126 1.8e-41 174.5 213 45.1
Duzib093G0788 Durio zibethinus HOM05D005750 ORTHO05D007126 2.4e-41 174.1 197 45.7
Glyma.03G076500 Glycine max HOM05D005750 ORTHO05D007126 1.2e-40 171.8 204 45.6
Sabra16G0106800 Salix brachista HOM05D005750 ORTHO05D007126 1.2e-40 171.8 233 40.3
Sed0026182 Sechium edule HOM05D005750 ORTHO05D007126 5.9e-40 169.5 195 47.2
TWI53G0977 Tripterygium wilfordii HOM05D005750 ORTHO05D007126 5.9e-40 169.5 212 43.4
COL.COLO4_14617 Corchorus olitorius HOM05D005750 ORTHO05D007126 1.9e-38 164.5 224 41.1
Haze_20940 Corylus avellana HOM05D005750 ORTHO05D007126 9.5e-38 162.2 187 44.9
Oeu004613.2 Olea europaea HOM05D005750 ORTHO05D007126 1.6e-37 161.4 238 39.1
Sabra06G0073600 Salix brachista HOM05D005750 ORTHO05D007126 1.6e-37 161.4 238 39.1
Rhsim05G0204700 Rhododendron simsii HOM05D005750 ORTHO05D007126 2.1e-37 161.0 228 40.4
TPR.G5190 Trifolium pratense HOM05D005750 ORTHO05D007126 1.4e-36 158.3 184 45.7
Gohir.D04G128250 Gossypium hirsutum HOM05D005750 ORTHO05D007126 1.1e-30 138.7 177 40.7
Actinidia29137 Actinidia chinensis HOM05D005750 ORTHO05D007126 5.6e-30 136.3 163 45.4
PRCOL_00002333 Prasinoderma coloniale HOM05D005750 ORTHO05D007126 2.1e-29 134.4 259 35.5
ECA236G1744 Erigeron canadensis HOM05D005750 ORTHO05D007126 4.7e-29 133.3 139 48.9
Gorai.012G111300 Gossypium raimondii HOM05D005750 ORTHO05D007126 1.0e-28 132.1 177 39.5
HPP92_018186 Vanilla planifolia HOM05D005750 ORTHO05D007126 3.1e-28 130.6 200 37.5
AUR62025787 Chenopodium quinoa HOM05D005750 ORTHO05D007126 3.7e-26 123.6 131 45.8
Haze_26299 Corylus avellana HOM05D005750 ORTHO05D007126 6.4e-26 122.9 172 40.7
CiPaw.10G154000 Carya illinoinensis HOM05D005750 ORTHO05D007126 1.9e-25 121.3 191 38.7
PGSC0003DMG400019130 Solanum tuberosum HOM05D005750 ORTHO05D007126 5.4e-25 119.8 130 45.4
Nn2g13588 Nelumbo nucifera HOM05D005750 ORTHO05D007126 9.2e-25 119.0 128 45.3
Ca_23809_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 1.2e-24 118.6 136 44.1
Solyc10g086770.3 Solanum lycopersicum HOM05D005750 ORTHO05D007126 1.3e-23 115.2 130 44.6
Nitab4.5_0006439g0020 Nicotiana tabacum HOM05D005750 ORTHO05D007126 7.1e-17 92.8 98 49.0
TAR402G0002 Trochodendron aralioides HOM05D005750 ORTHO05D007126 6.4e-10 69.7 76 50.0
Ca_23812_v3 Cicer arietinum L. HOM05D005750 ORTHO05D007126 3.2e-09 67.4 69 49.3
ATR0618G451 Amborella trichopoda HOM05D005750 ORTHO05D007126 1.7e-07 61.6 46 56.5
Nn2g11345 Nelumbo nucifera HOM05D005750 ORTHO05D007126 2.3e-07 61.2 46 56.5
A04p05660 Brassica napus HOM05D005750 ORTHO05D007126 3.0e-07 60.8 44 61.4
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 5.6e-06 56.6 174 28.7


User provided reference genes

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