Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 1.5e-178 629.8 412 100.0
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 1.3e-70 271.2 203 64.5
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 1.7e-70 270.8 205 63.4
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 6.6e-70 268.9 206 62.6
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 1.9e-69 267.3 205 63.4
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 2.5e-69 266.9 206 62.1
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 5.6e-69 265.8 204 64.2
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 3.6e-68 263.1 202 62.4
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 6.2e-68 262.3 206 60.7
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 8.1e-68 261.9 204 62.7
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 8.1e-68 261.9 204 62.7
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 8.1e-68 261.9 204 61.8
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 8.1e-68 261.9 202 61.4
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.1e-67 261.5 204 61.8
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 1.1e-67 261.5 202 60.4
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 1.1e-67 261.5 204 61.8
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 2.4e-67 260.4 204 62.7
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 3.1e-67 260.0 204 62.7
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 4.0e-67 259.6 204 63.7
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 4.0e-67 259.6 204 62.7
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 4.0e-67 259.6 202 61.4
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 4.0e-67 259.6 204 62.7
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 5.3e-67 259.2 202 62.4
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 6.9e-67 258.8 204 62.7
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 6.9e-67 258.8 204 63.2
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 9.0e-67 258.5 204 62.7
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 9.0e-67 258.5 204 61.8
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 1.2e-66 258.1 202 60.9
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 1.5e-66 257.7 204 62.7
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.6e-66 256.9 204 59.8
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.6e-66 256.9 204 60.3
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 3.4e-66 256.5 204 61.8
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 4.5e-66 256.1 204 61.8
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 4.5e-66 256.1 204 61.3
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 5.8e-66 255.8 204 61.3
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 5.8e-66 255.8 214 58.9
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 7.6e-66 255.4 204 61.8
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 7.6e-66 255.4 204 61.8
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 9.9e-66 255.0 204 61.3
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 9.9e-66 255.0 204 60.3
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 9.9e-66 255.0 205 61.0
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 1.3e-65 254.6 204 60.8
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 1.3e-65 254.6 202 58.9
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 1.3e-65 254.6 205 61.0
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 1.7e-65 254.2 204 59.8
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 1.7e-65 254.2 204 60.3
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 2.9e-65 253.4 204 60.8
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 2.9e-65 253.4 204 60.8
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 2.9e-65 253.4 204 60.8
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 3.8e-65 253.1 204 61.3
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 3.8e-65 253.1 203 60.1
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 3.8e-65 253.1 204 60.3
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 4.9e-65 252.7 204 61.3
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 4.9e-65 252.7 204 60.8
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 6.4e-65 252.3 204 60.8
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 6.4e-65 252.3 202 60.9
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 8.4e-65 251.9 204 60.3
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 8.4e-65 251.9 204 60.3
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 8.4e-65 251.9 203 59.6
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 8.4e-65 251.9 204 62.3
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 1.1e-64 251.5 204 59.8
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 1.4e-64 251.1 204 60.3
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 1.4e-64 251.1 204 60.3
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.4e-64 251.1 204 59.8
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 1.9e-64 250.8 202 59.4
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 1.9e-64 250.8 204 60.3
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 1.9e-64 250.8 206 59.7
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 1.9e-64 250.8 202 59.4
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 2.4e-64 250.4 204 59.3
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 2.4e-64 250.4 204 60.3
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 2.4e-64 250.4 203 59.6
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 3.2e-64 250.0 204 60.3
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 3.2e-64 250.0 202 58.9
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 3.2e-64 250.0 204 60.8
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 4.2e-64 249.6 204 58.8
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 4.2e-64 249.6 204 59.8
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 4.2e-64 249.6 204 61.3
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 5.5e-64 249.2 204 60.8
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 5.5e-64 249.2 205 60.5
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 5.5e-64 249.2 205 60.5
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 7.1e-64 248.8 202 58.9
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 9.3e-64 248.4 205 60.5
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 9.3e-64 248.4 205 60.0
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 2.7e-63 246.9 204 58.8
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.5e-63 246.5 223 56.5
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 4.6e-63 246.1 205 59.0
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 3.0e-62 243.4 223 55.6
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 8.7e-62 241.9 204 57.4
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.1e-61 241.5 204 58.3
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.9e-61 240.7 233 53.6
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 2.5e-61 240.4 220 56.4
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 3.3e-61 240.0 203 58.1
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 2.1e-60 237.3 187 61.5
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 6.9e-59 232.3 239 51.9
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.0e-58 230.7 186 60.8
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 3.8e-57 226.5 187 58.8
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 8.4e-57 225.3 186 59.7
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 3.2e-56 223.4 188 59.0
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 7.1e-56 222.2 187 59.9
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 1.6e-55 221.1 207 56.0
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 4.6e-55 219.5 284 44.4
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 6.0e-55 219.2 196 56.6
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 7.9e-55 218.8 187 57.8
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 3.9e-54 216.5 203 53.2
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 8.7e-54 215.3 192 55.7
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 1.6e-52 211.1 184 56.0
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 4.8e-52 209.5 202 52.0
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 5.9e-50 202.6 179 54.7
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 1.0e-49 201.8 164 58.5
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 1.0e-46 191.8 137 64.2
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 2.3e-46 190.7 137 63.5
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 3.3e-45 186.8 137 62.0
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 5.7e-45 186.0 137 62.0
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 4.5e-42 176.4 204 45.1
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 6.1e-39 166.0 135 60.7
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 2.3e-38 164.1 169 48.5
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 3.1e-35 153.7 205 45.4
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 3.2e-32 143.7 204 36.3
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 3.0e-30 137.1 226 38.1
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 9.1e-27 125.6 132 48.5
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 3.5e-26 123.6 201 35.8
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 3.7e-20 103.6 135 42.2
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 5.3e-19 99.8 122 45.1
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 2.1e-15 87.8 82 54.9
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 8.0e-15 85.9 62 62.9
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 1.4e-14 85.1 78 59.0
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 8.8e-14 82.4 128 38.3
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 1.7e-12 78.2 41 82.9


User provided reference genes

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