Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g280650 Chlamydomonas reinhardtii HOM05D002102 ORTHO05D008242 1.9e-142 509.2 269 100.0
Pp3c15_7910 Physcomitrium patens HOM05D002102 ORTHO05D008242 1.8e-28 130.6 187 42.8
Mapoly0033s0150 Marchantia polymorpha HOM05D002102 ORTHO05D008242 2.0e-27 127.1 197 41.1
unitig_92.g28193 Utricularia gibba HOM05D002594 ORTHO05D003499 2.3e-26 123.6 182 42.3
Oeu023527.1 Olea europaea HOM05D002102 ORTHO05D008242 2.9e-26 123.2 188 44.1
Peaxi162Scf00313g00048 Petunia axillaris HOM05D002102 ORTHO05D008242 7.3e-25 118.6 206 38.3
arahy.Tifrunner.gnm1.ann1.1TYS6L Arachis hypogaea HOM05D002102 ORTHO05D008242 1.6e-24 117.5 190 44.2
arahy.Tifrunner.gnm1.ann1.N8G6CJ Arachis hypogaea HOM05D002102 ORTHO05D008242 1.6e-24 117.5 190 43.2
Cc09_g04620 Coffea canephora HOM05D002102 ORTHO05D008242 1.6e-24 117.5 182 41.8
Eucgr.E03887 Eucalyptus grandis HOM05D002102 ORTHO05D008242 1.6e-24 117.5 229 38.9
Nn7g38425 Nelumbo nucifera HOM05D002102 ORTHO05D008242 1.6e-24 117.5 189 44.4
Sp2g09460 Schrenkiella parvula HOM05D002102 ORTHO05D008242 1.6e-24 117.5 192 38.5
Aqoxy1G01357 Aquilegia oxysepala HOM05D002102 ORTHO05D008242 2.1e-24 117.1 202 40.1
BcaC06g31600 Brassica carinata HOM05D002102 ORTHO05D008242 2.1e-24 117.1 192 38.0
Manes.03G073000 Manihot esculenta HOM05D002102 ORTHO05D008242 2.8e-24 116.7 183 41.0
CANSAT35G0655 Cannabis sativa HOM05D002102 ORTHO05D008242 3.6e-24 116.3 181 41.4
PSO675G4370 Papaver somniferum HOM05D002102 ORTHO05D008242 8.0e-24 115.2 209 37.3
BcaC06g34527 Brassica carinata HOM05D002102 ORTHO05D008242 1.8e-23 114.0 192 37.5
C07p27540 Brassica napus HOM05D002102 ORTHO05D008242 1.8e-23 114.0 192 37.5
BolC7t43285H Brassica oleracea HOM05D002102 ORTHO05D008242 1.8e-23 114.0 192 37.5
Carub.0008s0361 Capsella rubella HOM05D002102 ORTHO05D008242 1.8e-23 114.0 182 39.6
Cpa.g.sc30.78 Carica papaya HOM05D002102 ORTHO05D008242 1.8e-23 114.0 181 40.9
PSO170G6365 Papaver somniferum HOM05D002102 ORTHO05D008242 1.8e-23 114.0 209 36.8
TWI63G1577 Tripterygium wilfordii HOM05D002102 ORTHO05D008242 1.8e-23 114.0 181 41.4
A06p47030 Brassica napus HOM05D002102 ORTHO05D008242 2.3e-23 113.6 192 37.5
Thhalv10000983m.g Eutrema salsugineum HOM05D002102 ORTHO05D008242 2.3e-23 113.6 192 38.5
Lalb_Chr21g0315091 Lupinus albus HOM05D002102 ORTHO05D008242 2.3e-23 113.6 190 41.1
PGSC0003DMG402011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 3.0e-23 113.2 181 39.2
AT5G44650 Arabidopsis thaliana HOM05D002102 ORTHO05D008242 4.0e-23 112.8 192 38.5
Os01g0798500 Oryza sativa ssp. japonica HOM05D002102 ORTHO05D008242 4.0e-23 112.8 183 40.4
TPR.G19825 Trifolium pratense HOM05D002102 ORTHO05D008242 4.0e-23 112.8 189 41.8
BcaB07g30508 Brassica carinata HOM05D002102 ORTHO05D008242 6.8e-23 112.1 192 38.0
CSS0016773 Camellia sinensis var. sinensis HOM05D002102 ORTHO05D008242 6.8e-23 112.1 256 34.8
Solyc10g005180.3 Solanum lycopersicum HOM05D002102 ORTHO05D008242 6.8e-23 112.1 181 39.8
Nitab4.5_0002246g0020 Nicotiana tabacum HOM05D002102 ORTHO05D008242 8.9e-23 111.7 182 41.2
Sed0010823 Sechium edule HOM05D002102 ORTHO05D008242 8.9e-23 111.7 181 40.3
Lsat_1_v5_gn_8_106940 Lactuca sativa HOM05D002102 ORTHO05D008242 1.2e-22 111.3 181 41.4
MELO3C006996.2 Cucumis melo HOM05D002102 ORTHO05D008242 1.5e-22 110.9 191 39.3
Glyma.16G094300 Glycine max HOM05D002102 ORTHO05D008242 1.5e-22 110.9 190 41.1
Medtr8g070680 Medicago truncatula HOM05D002102 ORTHO05D008242 2.0e-22 110.5 188 42.6
Ca_22534_v3 Cicer arietinum L. HOM05D002102 ORTHO05D008242 2.6e-22 110.2 189 39.7
HanXRQChr09g0257721 Helianthus annuus HOM05D002102 ORTHO05D008242 2.6e-22 110.2 189 42.9
Lj4g0016411 Lotus japonicus HOM05D002102 ORTHO05D008242 2.6e-22 110.2 189 39.7
Rhsim02G0171500 Rhododendron simsii HOM05D002102 ORTHO05D008242 2.6e-22 110.2 187 41.7
Zm00001eb150810 Zea mays HOM05D002102 ORTHO05D008242 2.6e-22 110.2 187 39.0
AL8G14900 Arabidopsis lyrata HOM05D002102 ORTHO05D008242 3.4e-22 109.8 192 38.0
CiPaw.09G140600 Carya illinoinensis HOM05D002102 ORTHO05D008242 3.4e-22 109.8 181 40.9
Ciclev10016300m.g Citrus clementina HOM05D002102 ORTHO05D008242 3.4e-22 109.8 253 34.0
Glyma.08G267700 Glycine max HOM05D002102 ORTHO05D008242 3.4e-22 109.8 190 42.6
EL10Ac4g09967 Beta vulgaris HOM05D002102 ORTHO05D008242 4.4e-22 109.4 199 38.2
CARHR178230 Cardamine hirsuta HOM05D002102 ORTHO05D008242 7.5e-22 108.6 192 38.5
CsaV3_6G053190 Cucumis sativus L. HOM05D002102 ORTHO05D008242 7.5e-22 108.6 191 38.7
PGR004G2223 Punica granatum HOM05D002102 ORTHO05D008242 9.8e-22 108.2 189 40.7
QL11p010809 Quercus lobata HOM05D002102 ORTHO05D008242 9.8e-22 108.2 188 42.0
GSVIVG01037088001 Vitis vinifera HOM05D002102 ORTHO05D008242 1.3e-21 107.8 210 37.6
Gohir.D02G240400 Gossypium hirsutum HOM05D002102 ORTHO05D008242 2.2e-21 107.1 197 38.6
Aa31LG9G8520 Aethionema arabicum HOM05D002102 ORTHO05D008242 2.9e-21 106.7 179 38.0
BraA06t27576Z Brassica rapa HOM05D002102 ORTHO05D008242 2.9e-21 106.7 212 36.8
Gorai.005G268700 Gossypium raimondii HOM05D002102 ORTHO05D008242 2.9e-21 106.7 205 36.6
TAR627G1208 Trochodendron aralioides HOM05D002102 ORTHO05D008242 2.9e-21 106.7 177 40.1
Gohir.A03G218300 Gossypium hirsutum HOM05D002102 ORTHO05D008242 6.4e-21 105.5 205 36.6
Sabra01G0052500 Salix brachista HOM05D002102 ORTHO05D008242 6.4e-21 105.5 182 38.5
RcHm_v2.0_Chr5g0021821 Rosa chinensis HOM05D002102 ORTHO05D008242 1.1e-20 104.8 196 40.3
Actinidia34700 Actinidia chinensis HOM05D002102 ORTHO05D008242 1.4e-20 104.4 181 38.1
FvH4_3g13341 Fragaria vesca HOM05D002102 ORTHO05D008242 1.4e-20 104.4 196 40.3
Phvul.003G275400 Phaseolus vulgaris HOM05D002102 ORTHO05D008242 1.4e-20 104.4 240 34.2
Potri.001G074200 Populus trichocarpa HOM05D002102 ORTHO05D008242 1.4e-20 104.4 198 38.9
vmacro11020 Vaccinium macrocarpon HOM05D002102 ORTHO05D008242 2.4e-20 103.6 202 38.1
Thecc.02G001200 Theobroma cacao HOM05D002102 ORTHO05D008242 7.0e-20 102.1 177 38.4
CDE11G0809 Ceratophyllum demersum HOM05D002102 ORTHO05D008242 1.6e-19 100.9 199 33.7
AagrBONN_evm.TU.Sc2ySwM_368.1584 Anthoceros agrestis HOM05D002102 ORTHO05D008242 2.7e-19 100.1 197 37.1
Prupe.4G120800 Prunus persica HOM05D002102 ORTHO05D008242 4.6e-19 99.4 193 39.4
PGSC0003DMG401011260 Solanum tuberosum HOM05D002102 ORTHO05D008242 5.9e-19 99.0 164 38.4
Psat0s2609g0120 Pisum sativum HOM05D002102 ORTHO05D008242 1.3e-18 97.8 181 38.1
MD10G1224400 Malus domestica HOM05D002102 ORTHO05D008242 3.9e-18 96.3 183 41.0
CBR_g21832 Chara braunii HOM05D002102 ORTHO05D008242 6.6e-18 95.5 192 34.9
ECA232G0416 Erigeron canadensis HOM05D002102 ORTHO05D008242 6.6e-18 95.5 173 39.9
ClCG01G025950 Citrullus lanatus HOM05D002102 ORTHO05D008242 1.1e-17 94.7 164 39.0
Migut.M02036 Erythranthe guttata HOM05D002102 ORTHO05D008242 1.5e-17 94.4 99 53.5
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 1.9e-17 94.0 175 38.3
Haze_05188 Corylus avellana HOM05D002102 ORTHO05D008242 5.6e-17 92.4 217 35.9
SEGI_24162 Sequoiadendron giganteum HOM05D002102 ORTHO05D008242 5.6e-17 92.4 96 49.0
Lj1A1152G38 Lonicera japonica HOM05D002102 ORTHO05D008242 1.6e-16 90.9 160 40.0
Atru.chr10.236 Acer truncatum HOM05D002102 ORTHO05D008242 2.1e-16 90.5 171 38.0
FAN11G2372 Fragaria x ananassa HOM05D002102 ORTHO05D008242 6.2e-16 89.0 181 38.7
FAN25G3128 Fragaria x ananassa HOM05D002102 ORTHO05D008242 6.2e-16 89.0 181 38.7
HPP92_001585 Vanilla planifolia HOM05D002102 ORTHO05D008242 6.2e-16 89.0 162 38.3
FAN16G2960 Fragaria x ananassa HOM05D002102 ORTHO05D008242 2.3e-15 87.0 181 37.6
Sopen10g001170 Solanum pennellii HOM05D002102 ORTHO05D008242 2.3e-15 87.0 88 53.4
Dinv17885 Davidia involucrata HOM05D002102 ORTHO05D008242 8.9e-15 85.1 157 38.2
Nitab4.5_0001299g0100 Nicotiana tabacum HOM05D002102 ORTHO05D008242 1.5e-14 84.3 88 52.3
DCAR_001256 Daucus carota HOM05D002102 ORTHO05D008242 2.6e-14 83.6 106 45.3
COL.COLO4_25027 Corchorus olitorius HOM05D002102 ORTHO05D008242 4.4e-14 82.8 94 50.0
HPP92_001768 Vanilla planifolia HOM05D001389 ORTHO05D002892 7.5e-14 82.0 88 47.7
Sc24g0002820 Simmondsia chinensis HOM05D002102 ORTHO05D008242 9.8e-14 81.6 93 51.6
MBI02_g17886_MAGBIO Magnolia biondii HOM05D002102 ORTHO05D008242 6.0e-11 72.4 182 37.4
PSO541G0118 Papaver somniferum HOM05D002102 ORTHO05D008242 1.3e-10 71.2 210 32.9
RcHm_v2.0_Chr5g0021891 Rosa chinensis HOM05D002102 ORTHO05D008242 1.7e-10 70.9 92 45.7
Oeu011782.1 Olea europaea HOM05D002102 ORTHO05D008242 3.0e-10 70.1 70 51.4
BolC2t10554H Brassica oleracea HOM05D002102 ORTHO05D008242 5.6e-09 65.9 139 32.4
C02p45240 Brassica napus HOM05D002102 ORTHO05D008242 9.5e-09 65.1 143 32.9
AUR62040994 Chenopodium quinoa HOM05D002102 ORTHO05D008242 3.6e-08 63.2 65 49.2
SGA_v2.0_scaffold423G51451 Striga asiatica HOM05D002102 ORTHO05D008242 1.8e-07 60.8 74 45.9
AUR62042810 Chenopodium quinoa HOM05D002102 ORTHO05D008242 4.0e-07 59.7 124 35.5
RcHm_v2.0_Chr5g0021971 Rosa chinensis HOM05D002102 ORTHO05D008242 5.2e-07 59.3 69 49.3
A02p28510 Brassica napus HOM05D002102 ORTHO05D008242 1.5e-06 57.8 135 29.6


User provided reference genes

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