Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g266383 Chlamydomonas reinhardtii HOM05D000113 ORTHO05D147062 0.0e+00 1257.3 1192 100.0
AL5G10080 Arabidopsis lyrata HOM05D000113 ORTHO05D001108 1.8e-06 59.7 60 50.0
TWI31G0806 Tripterygium wilfordii HOM05D000113 ORTHO05D001108 1.8e-06 59.7 60 50.0
CBR_g34283 Chara braunii HOM05D000113 ORTHO05D005835 2.3e-06 59.3 93 40.9
Nitab4.5_0001456g0030 Nicotiana tabacum HOM05D000113 ORTHO05D001108 2.3e-06 59.3 60 50.0
Nitab4.5_0005692g0050 Nicotiana tabacum HOM05D000113 ORTHO05D001108 2.3e-06 59.3 60 50.0
Peaxi162Scf00683g00330 Petunia axillaris HOM05D000113 ORTHO05D001108 2.3e-06 59.3 60 50.0
Carub.0005s0011 Capsella rubella HOM05D000113 ORTHO05D001108 3.0e-06 58.9 60 50.0
MBI10_g06745_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D001108 3.0e-06 58.9 60 50.0
vmacro10615 Vaccinium macrocarpon HOM05D000113 ORTHO05D001108 3.0e-06 58.9 57 47.4
Duzib205G0411 Durio zibethinus HOM05D000113 ORTHO05D001108 3.9e-06 58.5 60 50.0
Mapoly0048s0072 Marchantia polymorpha HOM05D000113 ORTHO05D005835 3.9e-06 58.5 279 23.3
PGR083G2289 Punica granatum HOM05D000113 ORTHO05D001108 3.9e-06 58.5 60 50.0
EL10Ac6g14137 Beta vulgaris HOM05D000113 ORTHO05D005835 5.2e-06 58.2 57 54.4
CARHR143680 Cardamine hirsuta HOM05D000113 ORTHO05D001108 5.2e-06 58.2 60 50.0
MD16G1035100 Malus domestica HOM05D000113 ORTHO05D001108 5.2e-06 58.2 60 48.3
Nitab4.5_0004597g0010 Nicotiana tabacum HOM05D000113 ORTHO05D001108 5.2e-06 58.2 60 45.0
Peaxi162Scf00897g00210 Petunia axillaris HOM05D000113 ORTHO05D001108 5.2e-06 58.2 60 45.0
Solyc03g118920.3 Solanum lycopersicum HOM05D000113 ORTHO05D001108 5.2e-06 58.2 60 50.0
Sopen03g037860 Solanum pennellii HOM05D000113 ORTHO05D001108 5.2e-06 58.2 60 50.0
CAN.G1129.40 Capsicum annuum HOM05D000113 ORTHO05D001108 6.7e-06 57.8 60 48.3
AUR62040619 Chenopodium quinoa HOM05D000113 ORTHO05D005835 6.7e-06 57.8 60 51.7
Nitab4.5_0000881g0090 Nicotiana tabacum HOM05D000113 ORTHO05D001108 6.7e-06 57.8 60 45.0
Potri.015G042500 Populus trichocarpa HOM05D000113 ORTHO05D001108 6.7e-06 57.8 60 48.3
Rhsim09G0102100 Rhododendron simsii HOM05D000113 ORTHO05D001108 6.7e-06 57.8 60 46.7
Sc04g0003310 Simmondsia chinensis HOM05D000113 ORTHO05D001108 6.7e-06 57.8 60 50.0
Aa31LG2G8750 Aethionema arabicum HOM05D000113 ORTHO05D001108 8.8e-06 57.4 60 50.0
Ca_11118_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001108 8.8e-06 57.4 60 43.3
Dinv07476 Davidia involucrata HOM05D003925 ORTHO05D005835 8.8e-06 57.4 60 48.3
Duzib068G0973 Durio zibethinus HOM05D000113 ORTHO05D001108 8.8e-06 57.4 60 50.0
MD13G1033300 Malus domestica HOM05D000113 ORTHO05D001108 8.8e-06 57.4 60 46.7
Nn3g17997 Nelumbo nucifera HOM05D000113 ORTHO05D001108 8.8e-06 57.4 60 48.3
Sc07g0004580 Simmondsia chinensis HOM05D000113 ORTHO05D005835 8.8e-06 57.4 60 50.0


User provided reference genes

Program Settings