Gene: Solyc03g118920.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc03g118920.3
- Transcript Identifier Solyc03g118920.3.1
- Gene Type Coding gene
- Location SL4.0ch03 : 62133488-62143088 : positive
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D001108
- #Genes/#Species 483/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc03g118920.3.1
- uniprot A0A3Q7FUP8
- gene_id Solyc03g118920
Descriptions
- Description Helicase (AHRD V3.3 *** A0A200Q327_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004386 | IEA | GOA Database | helicase activity | |
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003723 | IBA IEA | GOA Database | RNA binding | |
| GO:0003724 | IEA | GOA Database | RNA helicase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G48650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011709 | Domain of unknown function DUF1605 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR007502 | Helicase-associated domain |
| IPR014720 | Double-stranded RNA-binding domain |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR011545 | DEAD/DEAH box helicase domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |