Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g261026 Chlamydomonas reinhardtii HOM05D005410 ORTHO05D144434 0.0e+00 1337.4 1085 100.0
Pp3c16_6290 Physcomitrium patens HOM05D005823 ORTHO05D007536 6.3e-11 74.3 106 41.5
AagrBONN_evm.TU.Sc2ySwM_228.3021 Anthoceros agrestis HOM05D005823 ORTHO05D007536 8.3e-11 73.9 142 35.9
Mapoly0060s0015 Marchantia polymorpha HOM05D005823 ORTHO05D007536 1.1e-10 73.6 87 42.5
Hund13622 Selenicereus undatus HOM05D005410 ORTHO05D007394 3.5e-09 68.6 107 38.3
TPR.G6787 Trifolium pratense HOM05D005410 ORTHO05D007394 6.6e-08 64.3 123 34.1
ATR0697G079 Amborella trichopoda HOM05D005410 ORTHO05D007394 1.1e-07 63.5 106 36.8
ClCG02G024420 Citrullus lanatus HOM05D005410 ORTHO05D007394 4.2e-07 61.6 106 34.9
Cc01_g00190 Coffea canephora HOM05D005410 ORTHO05D007394 4.2e-07 61.6 83 38.6
HPP92_001905 Vanilla planifolia HOM05D005410 ORTHO05D007394 4.2e-07 61.6 105 35.2
Cpa.g.sc119.36 Carica papaya HOM05D005410 ORTHO05D007394 5.5e-07 61.2 120 36.7
CBR_g66797 Chara braunii HOM05D005410 ORTHO05D007394 5.5e-07 61.2 159 30.2
Prupe.6G002700 Prunus persica HOM05D005410 ORTHO05D007394 5.5e-07 61.2 109 34.9
vmacro17045 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 5.5e-07 61.2 168 28.6
AL1G63500 Arabidopsis lyrata HOM05D005410 ORTHO05D007394 7.2e-07 60.8 112 33.9
Medtr8g088420 Medicago truncatula HOM05D005410 ORTHO05D007394 9.5e-07 60.5 147 29.9
SMO119G0254 Selaginella moellendorffii HOM05D005823 ORTHO05D007536 9.5e-07 60.5 156 32.7
CANSAT11G0129 Cannabis sativa HOM05D005410 ORTHO05D007394 1.2e-06 60.1 83 39.8
Duzib168G1987 Durio zibethinus HOM05D005410 ORTHO05D007394 1.2e-06 60.1 116 32.8
CDE10G1105 Ceratophyllum demersum HOM05D005410 ORTHO05D007394 1.6e-06 59.7 171 29.8
CAN.G1834.14 Capsicum annuum HOM05D005410 ORTHO05D007394 2.1e-06 59.3 110 30.9
Sc09g0000010 Simmondsia chinensis HOM05D005410 ORTHO05D007394 2.1e-06 59.3 83 39.8
TAR622G0599 Trochodendron aralioides HOM05D001942 ORTHO05D001996 2.1e-06 59.3 98 31.6
AUR62005847 Chenopodium quinoa HOM05D005410 ORTHO05D007394 2.8e-06 58.9 83 39.8
CsaV3_4G017550 Cucumis sativus L. HOM05D005410 ORTHO05D007394 2.8e-06 58.9 106 35.8
FAN25G1403 Fragaria x ananassa HOM05D005410 ORTHO05D007394 2.8e-06 58.9 155 28.4
Lj4g0005740 Lotus japonicus HOM05D005410 ORTHO05D007394 2.8e-06 58.9 95 36.8
PGR102G1996 Punica granatum HOM05D005410 ORTHO05D007394 2.8e-06 58.9 113 35.4
Sed0021908 Sechium edule HOM05D005410 ORTHO05D007394 2.8e-06 58.9 106 34.9
MELO3C014728.2 Cucumis melo HOM05D005410 ORTHO05D007394 3.6e-06 58.5 106 35.8
Glyma.08G124900 Glycine max HOM05D005410 ORTHO05D007394 3.6e-06 58.5 96 35.4
Gohir.A04G090700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 3.6e-06 58.5 95 35.8
Gohir.D04G130700 Gossypium hirsutum HOM05D005410 ORTHO05D007394 3.6e-06 58.5 95 35.8
Gorai.012G114400 Gossypium raimondii HOM05D005410 ORTHO05D007394 3.6e-06 58.5 95 35.8
Phvul.002G247200 Phaseolus vulgaris HOM05D005410 ORTHO05D007394 3.6e-06 58.5 107 33.6
Aqoxy3G02952 Aquilegia oxysepala HOM05D005823 ORTHO05D007536 4.7e-06 58.2 110 36.4
ECA233G0964 Erigeron canadensis HOM05D005410 ORTHO05D007394 4.7e-06 58.2 166 29.5
Lalb_Chr12g0204581 Lupinus albus HOM05D005410 ORTHO05D007394 4.7e-06 58.2 86 36.0
PSO384G0864 Papaver somniferum HOM05D005410 ORTHO05D007394 4.7e-06 58.2 119 30.3
Zm00001eb300990 Zea mays HOM05D005410 ORTHO05D007394 4.7e-06 58.2 83 37.3
FAN16G2022 Fragaria x ananassa HOM05D005410 ORTHO05D007394 6.1e-06 57.8 155 28.4
Nitab4.5_0006195g0040 Nicotiana tabacum HOM05D005410 ORTHO05D007394 6.1e-06 57.8 91 34.1
PSO339G0242 Papaver somniferum HOM05D005410 ORTHO05D007394 6.1e-06 57.8 164 28.0
Psat7g064320 Pisum sativum HOM05D005410 ORTHO05D007394 6.1e-06 57.8 122 33.6
SalBow7G3540 Salvia bowleyana HOM05D001942 ORTHO05D001996 6.1e-06 57.8 87 34.5
TAR369G0462 Trochodendron aralioides HOM05D005410 ORTHO05D007394 6.1e-06 57.8 165 27.9
COL.COLO4_07519 Corchorus olitorius HOM05D005410 ORTHO05D007394 8.0e-06 57.4 95 35.8
Duzib160G0433 Durio zibethinus HOM05D001202 ORTHO05D001728 8.0e-06 57.4 113 33.6


User provided reference genes

Program Settings