Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 4.1e-237 824.7 536 100.0
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 1.9e-32 144.8 366 28.7
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 3.2e-32 144.1 369 28.7
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.6e-31 141.7 366 29.2
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 3.0e-30 137.5 369 27.6
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 6.7e-30 136.3 370 28.6
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 8.8e-30 136.0 367 28.1
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 8.8e-30 136.0 371 26.7
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 1.5e-29 135.2 368 27.2
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 4.3e-29 133.7 366 27.9
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 3.7e-28 130.6 369 26.3
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 6.3e-28 129.8 368 26.9
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 6.3e-28 129.8 365 27.7
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.4e-27 128.6 368 26.6
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.8e-27 128.3 368 26.9
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 1.8e-27 128.3 366 27.0
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 2.4e-27 127.9 376 27.4
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 5.3e-27 126.7 366 26.0
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 6.9e-27 126.3 366 26.8
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 1.2e-26 125.6 366 25.4
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 1.5e-26 125.2 369 26.3
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 2.0e-26 124.8 369 26.3
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 2.6e-26 124.4 366 26.0
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 4.5e-26 123.6 367 26.4
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 1.0e-25 122.5 366 26.2
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.3e-25 122.1 372 25.8
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.7e-25 121.7 365 24.9
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 2.2e-25 121.3 369 27.9
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 2.9e-25 120.9 366 26.2
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 3.8e-25 120.6 366 25.1
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 5.0e-25 120.2 366 26.8
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 6.5e-25 119.8 373 26.8
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 6.5e-25 119.8 366 26.0
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 8.5e-25 119.4 370 25.9
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.1e-24 119.0 377 24.7
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 9.4e-24 115.9 371 26.4
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 2.1e-23 114.8 366 24.6
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 2.7e-23 114.4 369 26.3
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 4.7e-23 113.6 261 30.3
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 6.1e-23 113.2 260 30.8
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 2.3e-22 111.3 260 30.8
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 2.3e-22 111.3 368 26.4
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 5.1e-22 110.2 367 24.0
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 5.1e-22 110.2 380 23.9
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 5.1e-22 110.2 260 29.6
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 6.7e-22 109.8 368 24.5
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 3.3e-21 107.5 366 25.1
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 4.4e-21 107.1 368 26.1
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 5.7e-21 106.7 369 25.2
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 2.2e-20 104.8 263 29.3
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 3.7e-20 104.0 260 30.4
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 4.8e-20 103.6 260 30.4
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 6.3e-20 103.2 260 28.8
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 6.3e-20 103.2 260 28.5
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 2.4e-19 101.3 348 25.9
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 2.4e-19 101.3 369 23.8
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 9.1e-19 99.4 261 28.7
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 9.1e-19 99.4 369 24.1
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 1.2e-18 99.0 261 29.1
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 1.2e-18 99.0 261 29.1
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 7.7e-18 96.3 260 28.8
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 7.7e-18 96.3 258 25.6
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 7.7e-18 96.3 368 23.9
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.4e-13 80.5 400 22.0
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 4.1e-11 73.9 237 25.7
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 5.9e-10 70.1 93 39.8
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 1.3e-09 68.9 110 38.2
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 1.3e-09 68.9 93 38.7
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 3.8e-09 67.4 236 23.3
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 5.0e-09 67.0 237 23.2
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 9.4e-08 62.8 102 34.3
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 9.4e-08 62.8 181 27.6
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 2.1e-07 61.6 53 49.1
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 3.6e-07 60.8 71 39.4
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 3.6e-07 60.8 64 43.8


User provided reference genes

Program Settings