Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 5.2e-252 874.0 472 100.0
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 1.8e-74 284.3 302 52.0
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 5.1e-74 282.7 304 54.9
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 8.7e-74 282.0 302 51.7
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 1.1e-73 281.6 307 49.8
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.5e-73 281.2 304 52.0
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.9e-73 280.8 302 51.7
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.5e-73 280.4 302 52.3
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 9.6e-73 278.5 302 51.0
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 9.6e-73 278.5 322 48.8
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 9.6e-73 278.5 313 50.5
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 9.6e-73 278.5 302 51.3
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 9.6e-73 278.5 328 47.9
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 2.8e-72 276.9 302 50.3
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 2.8e-72 276.9 302 51.0
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 2.8e-72 276.9 335 48.1
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 3.7e-72 276.6 301 51.2
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 4.8e-72 276.2 304 51.0
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 6.2e-72 275.8 302 50.7
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 1.1e-71 275.0 316 50.3
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 1.1e-71 275.0 302 50.0
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 1.8e-71 274.2 302 49.7
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 1.8e-71 274.2 302 50.7
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 2.4e-71 273.9 304 51.6
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 3.1e-71 273.5 302 50.7
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 4.0e-71 273.1 302 49.3
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 4.0e-71 273.1 302 49.3
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 5.3e-71 272.7 315 49.8
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 5.3e-71 272.7 302 51.7
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 5.3e-71 272.7 302 51.7
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 5.3e-71 272.7 317 48.3
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 6.9e-71 272.3 302 51.7
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 6.9e-71 272.3 302 49.0
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 9.0e-71 271.9 340 47.9
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 9.0e-71 271.9 302 51.3
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 1.5e-70 271.2 302 50.3
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 1.5e-70 271.2 302 50.3
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 2.0e-70 270.8 316 48.7
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 2.6e-70 270.4 322 47.5
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 2.6e-70 270.4 317 47.6
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 2.6e-70 270.4 302 49.3
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 2.6e-70 270.4 311 49.2
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 5.8e-70 269.2 302 50.7
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 5.8e-70 269.2 301 50.2
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 9.9e-70 268.5 302 51.0
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 9.9e-70 268.5 340 46.8
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 9.9e-70 268.5 297 50.8
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 9.9e-70 268.5 302 50.3
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 9.9e-70 268.5 302 49.0
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 1.3e-69 268.1 302 49.7
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.7e-69 267.7 341 47.8
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 1.7e-69 267.7 302 51.0
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 1.7e-69 267.7 302 51.0
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 2.2e-69 267.3 341 47.8
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 2.2e-69 267.3 302 50.3
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 2.2e-69 267.3 299 49.5
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 2.9e-69 266.9 321 48.0
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 4.9e-69 266.2 311 49.5
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 8.4e-69 265.4 302 50.0
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 8.4e-69 265.4 302 49.0
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 1.1e-68 265.0 302 49.3
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 1.9e-68 264.2 317 47.9
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 2.5e-68 263.8 302 50.3
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 3.2e-68 263.5 323 48.3
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 5.5e-68 262.7 301 49.2
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 5.5e-68 262.7 312 48.1
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 2.1e-67 260.8 320 47.2
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 2.1e-67 260.8 299 48.8
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 7.9e-67 258.8 256 55.1
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 1.3e-66 258.1 256 55.1
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 1.8e-66 257.7 332 45.8
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.9e-66 256.5 336 45.8
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 6.7e-66 255.8 302 48.0
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 1.5e-65 254.6 308 47.7
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 1.5e-65 254.6 302 48.3
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 3.7e-64 250.0 345 44.3
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 1.8e-63 247.7 271 50.6
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 2.4e-63 247.3 332 46.1
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.4e-62 243.4 355 43.4
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 3.8e-61 240.0 259 51.4
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 2.5e-60 237.3 301 45.8
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 2.5e-60 237.3 336 43.8
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 4.2e-60 236.5 302 45.4
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 1.2e-59 235.0 300 45.7
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 3.5e-59 233.4 302 45.0
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 4.6e-59 233.0 283 47.0
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 6.7e-58 229.2 302 44.7
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 8.7e-58 228.8 256 50.8
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.9e-57 227.6 324 44.8
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 2.8e-56 223.8 223 54.3
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 3.7e-56 223.4 310 43.5
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 4.8e-56 223.0 305 44.3
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 4.8e-56 223.0 330 43.0
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 8.2e-56 222.2 223 52.5
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.8e-55 221.1 201 55.7
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 3.8e-53 213.4 274 45.6
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 1.2e-51 208.4 317 41.3
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 6.1e-51 206.1 202 54.0
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 1.8e-50 204.5 430 34.9
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 5.1e-50 203.0 260 46.2
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 6.7e-50 202.6 311 41.2
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 4.3e-49 199.9 287 43.6
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 3.4e-46 190.3 174 54.6
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 1.7e-45 188.0 302 39.7
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.4e-42 178.3 317 37.9
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 3.0e-42 177.2 268 41.8
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.3e-40 171.8 303 37.3
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 4.5e-38 163.3 116 66.4
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 7.7e-38 162.5 252 41.7
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 3.8e-37 160.2 339 34.5
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 5.0e-37 159.8 229 42.4
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 1.9e-36 157.9 137 58.4
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.2e-35 155.2 274 36.9
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 3.9e-34 150.2 259 39.0
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 9.1e-31 139.0 105 63.8
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 4.5e-30 136.7 191 42.9
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 7.7e-30 136.0 314 30.6
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 1.7e-24 118.2 110 54.5
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 1.6e-22 111.7 185 40.5
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 2.9e-21 107.5 330 29.4
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 4.0e-18 97.1 66 71.2
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 6.8e-18 96.3 168 39.9
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 3.8e-13 80.5 46 80.4
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 8.6e-13 79.3 149 37.6
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 1.9e-12 78.2 52 71.2
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 4.2e-12 77.0 43 81.4
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 9.5e-12 75.9 76 47.4
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 6.1e-11 73.2 246 29.3
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.3e-10 71.2 42 76.2
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 3.4e-09 67.4 70 47.1
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 3.4e-09 67.4 63 52.4
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 9.2e-07 59.3 88 39.8
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 9.2e-07 59.3 35 77.1
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.6e-06 58.5 32 78.1
TAR376G0002 Trochodendron aralioides HOM05D005536 ORTHO05D006999 2.7e-06 57.8 208 24.5


User provided reference genes

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