Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre03.g173600 Chlamydomonas reinhardtii HOM05D000894 ORTHO05D002325 0.0e+00 1557.3 1379 100.0
Gohir.A05G254900 Gossypium hirsutum HOM05D000894 ORTHO05D002325 4.9e-08 65.1 91 39.6
Gohir.D05G256500 Gossypium hirsutum HOM05D000894 ORTHO05D002325 6.4e-08 64.7 91 38.5
Gorai.009G268000 Gossypium raimondii HOM05D000894 ORTHO05D002325 6.4e-08 64.7 91 38.5
TWI34G1460 Tripterygium wilfordii HOM05D000894 ORTHO05D002325 2.4e-07 62.8 78 48.7
Dinv41431 Davidia involucrata HOM05D000894 ORTHO05D002325 3.2e-07 62.4 93 41.9
Os07g0498800 Oryza sativa ssp. japonica HOM05D000894 ORTHO05D002325 3.2e-07 62.4 90 37.8
Aqoxy3G00355 Aquilegia oxysepala HOM05D000894 ORTHO05D002325 4.1e-07 62.0 89 39.3
Zm00001eb198450 Zea mays HOM05D000894 ORTHO05D002325 4.1e-07 62.0 89 41.6
AUR62011244 Chenopodium quinoa HOM05D000894 ORTHO05D002325 5.4e-07 61.6 81 44.4
Thhalv10003631m.g Eutrema salsugineum HOM05D000894 ORTHO05D002325 5.4e-07 61.6 73 43.8
Mapoly0067s0004 Marchantia polymorpha HOM05D000894 ORTHO05D002325 5.4e-07 61.6 93 37.6
Pp3c2_12670 Physcomitrium patens HOM05D000894 ORTHO05D002325 5.4e-07 61.6 89 40.4
Cfa014035 Carpinus fangiana HOM05D000894 ORTHO05D002325 7.0e-07 61.2 91 39.6
Haze_22740 Corylus avellana HOM05D000894 ORTHO05D002325 7.0e-07 61.2 91 38.5
Eucgr.C04105 Eucalyptus grandis HOM05D000894 ORTHO05D002325 7.0e-07 61.2 78 47.4
Nitab4.5_0005297g0060 Nicotiana tabacum HOM05D001927 ORTHO05D001972 7.0e-07 61.2 122 33.6
Solyc03g032160.3 Solanum lycopersicum HOM05D001927 ORTHO05D001972 7.0e-07 61.2 105 36.2
Ciclev10007581m.g Citrus clementina HOM05D000894 ORTHO05D002325 9.2e-07 60.8 91 42.9
DCAR_013900 Daucus carota HOM05D000894 ORTHO05D002325 9.2e-07 60.8 95 36.8
PSO541G1981 Papaver somniferum HOM05D000894 ORTHO05D002325 9.2e-07 60.8 89 37.1
PSO675G7487 Papaver somniferum HOM05D000894 ORTHO05D002325 9.2e-07 60.8 89 37.1
Potri.002G013500 Populus trichocarpa HOM05D000894 ORTHO05D002325 9.2e-07 60.8 122 32.8
Potri.005G247900 Populus trichocarpa HOM05D000894 ORTHO05D002325 9.2e-07 60.8 96 37.5
Glyma.17G106000 Glycine max HOM05D000894 ORTHO05D002325 1.2e-06 60.5 78 46.2
Phvul.003G173700 Phaseolus vulgaris HOM05D000894 ORTHO05D002325 1.2e-06 60.5 90 43.3
Prupe.1G356800 Prunus persica HOM05D000894 ORTHO05D002325 1.2e-06 60.5 91 38.5
Sc08g0005760 Simmondsia chinensis HOM05D000894 ORTHO05D002325 1.2e-06 60.5 88 42.0
AL8G19490 Arabidopsis lyrata HOM05D000894 ORTHO05D002325 1.6e-06 60.1 73 42.5
AT5G25270 Arabidopsis thaliana HOM05D000894 ORTHO05D002325 1.6e-06 60.1 81 44.4
BcaB07g31087 Brassica carinata HOM05D000894 ORTHO05D002325 1.6e-06 60.1 89 38.2
QL02p013593 Quercus lobata HOM05D000894 ORTHO05D002325 1.6e-06 60.1 91 38.5
Hund21602 Selenicereus undatus HOM05D000894 ORTHO05D002325 1.6e-06 60.1 83 44.6
AT5G42220 Arabidopsis thaliana HOM05D000894 ORTHO05D002325 2.1e-06 59.7 80 42.5
Lalb_Chr07g0179451 Lupinus albus HOM05D000894 ORTHO05D002325 2.1e-06 59.7 78 44.9
Pp3c1_29440 Physcomitrium patens HOM05D000894 ORTHO05D002325 2.1e-06 59.7 92 38.0
Psat4g035360 Pisum sativum HOM05D000894 ORTHO05D002325 2.1e-06 59.7 78 44.9
Sabra05G0191600 Salix brachista HOM05D000894 ORTHO05D002325 2.1e-06 59.7 91 38.5
TWI63G0674 Tripterygium wilfordii HOM05D000894 ORTHO05D002325 2.1e-06 59.7 78 47.4
Carub.0006s2309 Capsella rubella HOM05D000894 ORTHO05D002325 2.7e-06 59.3 86 43.0
ClCG05G015220 Citrullus lanatus HOM05D000894 ORTHO05D002325 2.7e-06 59.3 91 38.5
MELO3C017008.2 Cucumis melo HOM05D000894 ORTHO05D002325 2.7e-06 59.3 91 38.5
CsaV3_4G037100 Cucumis sativus L. HOM05D000894 ORTHO05D002325 2.7e-06 59.3 91 38.5
Lalb_Chr09g0321261 Lupinus albus HOM05D001927 ORTHO05D001972 2.7e-06 59.3 88 39.8
Sabra18G0098100 Salix brachista HOM05D000894 ORTHO05D001833 2.7e-06 59.3 73 47.9
Sabra18G0100100 Salix brachista HOM05D000894 ORTHO05D002325 2.7e-06 59.3 73 47.9
Atru.chr13.174 Acer truncatum HOM05D000894 ORTHO05D002325 3.5e-06 58.9 90 36.7
Atru.chr7.270 Acer truncatum HOM05D000894 ORTHO05D002325 3.5e-06 58.9 73 47.9
ATR0661G248 Amborella trichopoda HOM05D000894 ORTHO05D002325 3.5e-06 58.9 119 34.5
Carub.0008s0704 Capsella rubella HOM05D000894 ORTHO05D002325 3.5e-06 58.9 73 42.5
Nitab4.5_0000495g0160 Nicotiana tabacum HOM05D001927 ORTHO05D001972 3.5e-06 58.9 110 33.6
TPR.G15790 Trifolium pratense HOM05D000894 ORTHO05D002325 3.5e-06 58.9 78 44.9
TWI56G0050 Tripterygium wilfordii HOM05D000894 ORTHO05D002325 3.5e-06 58.9 91 36.3
VMungo1215G1990 Vigna mungo HOM05D000894 ORTHO05D002325 3.5e-06 58.9 90 42.2
Aa31LG9G12370 Aethionema arabicum HOM05D000894 ORTHO05D002325 4.6e-06 58.5 88 38.6
ATR0767G183 Amborella trichopoda HOM05D000894 ORTHO05D002325 4.6e-06 58.5 86 43.0
Cpa.g.sc26.230 Carica papaya HOM05D000894 ORTHO05D002325 4.6e-06 58.5 89 38.2
EL10Ac8g18806 Beta vulgaris HOM05D000894 ORTHO05D002325 6.0e-06 58.2 94 40.4
AUR62036772 Chenopodium quinoa HOM05D000894 ORTHO05D002325 6.0e-06 58.2 112 35.7
HanXRQChr06g0165771 Helianthus annuus HOM05D000894 ORTHO05D002325 6.0e-06 58.2 108 35.2
Lsat_1_v5_gn_1_43760 Lactuca sativa HOM05D000894 ORTHO05D002325 6.0e-06 58.2 89 41.6
MD08G1004700 Malus domestica HOM05D000894 ORTHO05D002325 6.0e-06 58.2 96 37.5
Manes.05G140700 Manihot esculenta HOM05D000894 ORTHO05D002325 6.0e-06 58.2 91 36.3
Potri.006G059700 Populus trichocarpa HOM05D000894 ORTHO05D002325 6.0e-06 58.2 73 47.9
Sopen03g006010 Solanum pennellii HOM05D001927 ORTHO05D001972 6.0e-06 58.2 101 34.7
Thecc.09G140100 Theobroma cacao HOM05D000894 ORTHO05D002325 6.0e-06 58.2 78 46.2
AL6G36920 Arabidopsis lyrata HOM05D000894 ORTHO05D002325 7.8e-06 57.8 81 43.2
CANSAT11G0306 Cannabis sativa HOM05D000894 ORTHO05D002325 7.8e-06 57.8 79 45.6
Duzib093G2095 Durio zibethinus HOM05D000894 ORTHO05D002325 7.8e-06 57.8 89 37.1
MBI08_g26493_MAGBIO Magnolia biondii HOM05D000894 ORTHO05D002325 7.8e-06 57.8 91 37.4
Medtr4g116370 Medicago truncatula HOM05D000894 ORTHO05D002325 7.8e-06 57.8 78 43.6
Phvul.001G001400 Phaseolus vulgaris HOM05D000894 ORTHO05D002325 7.8e-06 57.8 113 33.6
QL02p091098 Quercus lobata HOM05D000894 ORTHO05D002325 7.8e-06 57.8 78 44.9
Sabra02G0010500 Salix brachista HOM05D000894 ORTHO05D002325 7.8e-06 57.8 122 32.0
Sopen04g035790 Solanum pennellii HOM05D000894 ORTHO05D002325 7.8e-06 57.8 90 34.4


User provided reference genes

Program Settings