Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc948.3 Carica papaya HOM05D000004 ORTHO05D000002 6.6e-37 156.8 74 100.0
Cpa.g.sc32.71 Carica papaya HOM05D000004 ORTHO05D000002 8.4e-16 86.7 61 70.5
Cpa.g.sc186.9 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-13 79.0 59 62.7
Cpa.g.sc38.4 Carica papaya HOM05D050007 ORTHO05D000002 8.7e-13 76.6 59 64.4
SHI30667 Sapria himalayana HOM05D000004 ORTHO05D000002 1.3e-11 72.8 71 47.9
THA.LOC109117167 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.1e-11 72.0 72 44.4
THA.LOC104815187 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.8e-11 71.6 72 44.4
THA.LOC104818143 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.7e-11 71.2 72 47.2
THA.LOC104803388 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.8e-11 70.9 71 47.9
Cpa.g.sc579.1 Carica papaya HOM05D000004 ORTHO05D000002 6.2e-11 70.5 56 50.0
THA.LOC109116372 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.1e-10 69.7 71 47.9
TPR.G36070 Trifolium pratense HOM05D000004 ORTHO05D000002 1.1e-10 69.7 73 39.7
THA.LOC104806049 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-10 69.3 72 43.1
THA.LOC104815166 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-10 69.3 72 43.1
THA.LOC104821192 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-10 69.3 71 46.5
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 1.8e-10 68.9 71 45.1
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 1.8e-10 68.9 71 45.1
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 1.8e-10 68.9 71 45.1
THA.LOC104798707 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.8e-10 68.9 72 44.4
THA.LOC104818561 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.8e-10 68.9 72 43.1
THA.LOC104825361 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.8e-10 68.9 72 44.4
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 2.4e-10 68.6 71 43.7
TPR.G17086 Trifolium pratense HOM05D000004 ORTHO05D000002 2.4e-10 68.6 73 41.1
PGR042G3761 Punica granatum HOM05D000004 ORTHO05D000002 3.1e-10 68.2 71 45.1
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.1e-10 68.2 73 43.8
THA.LOC104800237 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.1e-10 68.2 72 44.4
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.1e-10 68.2 73 43.8
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 4.0e-10 67.8 73 43.8
THA.LOC104822532 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.0e-10 67.8 73 43.8
Cpa.g.sc225.3 Carica papaya HOM05D000004 ORTHO05D000563 5.3e-10 67.4 71 42.3
SHI35599 Sapria himalayana HOM05D000004 ORTHO05D000002 5.3e-10 67.4 71 43.7
SHI43808 Sapria himalayana HOM05D000004 ORTHO05D000002 5.3e-10 67.4 71 45.1
THA.LOC104801624 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.3e-10 67.4 72 44.4
Cpa.g.sc102.30 Carica papaya HOM05D000004 ORTHO05D000002 6.9e-10 67.0 71 40.8
PGR142G0162 Punica granatum HOM05D000004 ORTHO05D000002 6.9e-10 67.0 71 43.7
THA.LOC104804721 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.9e-10 67.0 72 40.3
THA.LOC104810255 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.9e-10 67.0 72 44.4
PGR044G0528 Punica granatum HOM05D000004 ORTHO05D000002 9.0e-10 66.6 71 43.7
THA.LOC109115993 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.0e-10 66.6 72 43.1
THA.LOC109116729 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.0e-10 66.6 72 43.1
TPR.G40777 Trifolium pratense HOM05D000004 ORTHO05D000002 9.0e-10 66.6 73 38.4
Cpa.g.sc17.151 Carica papaya HOM05D000004 ORTHO05D000002 1.2e-09 66.2 71 40.8
Cpa.g.sc440.3 Carica papaya HOM05D000004 ORTHO05D000002 1.2e-09 66.2 71 40.8
Cpa.g.sc880.4 Carica papaya HOM05D000004 ORTHO05D000002 1.5e-09 65.9 71 40.8
PGR102G0770 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-09 65.9 71 43.7
PGR004G2150 Punica granatum HOM05D000004 ORTHO05D000002 2.0e-09 65.5 71 42.3
PGR125G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.0e-09 65.5 74 43.2
THA.LOC104816126 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.0e-09 65.5 70 41.4
THA.LOC104827530 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.0e-09 65.5 72 41.7
Atru.chr4.546 Acer truncatum HOM05D000004 ORTHO05D000002 2.6e-09 65.1 73 41.1
THA.LOC104807122 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.6e-09 65.1 71 42.3
Atru.chr1.2102 Acer truncatum HOM05D000004 ORTHO05D000002 3.4e-09 64.7 73 41.1
Atru.chr4.606 Acer truncatum HOM05D000004 ORTHO05D000002 3.4e-09 64.7 71 40.8
THA.LOC104804981 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.4e-09 64.7 70 41.4
THA.LOC104810220 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.4e-09 64.7 56 48.2
Cpa.g.sc38.2 Carica papaya HOM05D000004 ORTHO05D000002 5.8e-09 63.9 71 39.4
Cpa.g.sc39.103 Carica papaya HOM05D000004 ORTHO05D000002 5.8e-09 63.9 58 55.2
Lalb_Chr19g0128701 Lupinus albus HOM05D000004 ORTHO05D000002 5.8e-09 63.9 71 42.3
SHI47489 Sapria himalayana HOM05D000004 ORTHO05D000002 5.8e-09 63.9 71 43.7
BolC1t02407H Brassica oleracea HOM05D000004 ORTHO05D000002 1.0e-08 63.2 72 40.3
PGR072G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.0e-08 63.2 70 42.9
THA.LOC104807077 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.0e-08 63.2 70 42.9
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-08 62.8 73 38.4
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-08 62.8 73 38.4
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-08 62.8 73 38.4
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-08 62.8 73 38.4
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-08 62.8 73 38.4
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-08 62.8 73 38.4
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 1.3e-08 62.8 73 38.4
PGR119G2524 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-08 62.8 62 40.3
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 1.7e-08 62.4 73 41.1
Cpa.g.sc225.5 Carica papaya HOM05D000004 ORTHO05D000002 1.7e-08 62.4 71 36.6
Cpa.g.sc4.120 Carica papaya HOM05D000004 ORTHO05D000563 1.7e-08 62.4 44 59.1
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 1.7e-08 62.4 73 38.4
PGR004G2489 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-08 62.4 71 42.3
PGR139G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.7e-08 62.4 73 38.4
THA.LOC104800054 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.7e-08 62.4 70 41.4
PGR119G1925 Punica granatum HOM05D000004 ORTHO05D000002 2.2e-08 62.0 74 41.9
THA.LOC104809125 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.2e-08 62.0 70 38.6
THA.LOC104810159 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.2e-08 62.0 71 42.3
THA.LOC104821901 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.2e-08 62.0 71 42.3
THA.LOC109115991 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.2e-08 62.0 70 38.6
Cpa.g.sc15.97 Carica papaya HOM05D000004 ORTHO05D000002 2.9e-08 61.6 71 39.4
Cpa.g.sc172.3 Carica papaya HOM05D000004 ORTHO05D000002 2.9e-08 61.6 71 40.8
Cpa.g.sc210.4 Carica papaya HOM05D000004 ORTHO05D000002 2.9e-08 61.6 67 38.8
PGR042G1210 Punica granatum HOM05D000004 ORTHO05D000002 2.9e-08 61.6 71 40.8
THA.LOC104800025 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.9e-08 61.6 70 38.6
THA.LOC104818535 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.9e-08 61.6 71 42.3
THA.LOC104821897 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.9e-08 61.6 70 41.4
SHI01386 Sapria himalayana HOM05D000004 ORTHO05D000002 3.8e-08 61.2 65 46.2
THA.LOC104821189 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.8e-08 61.2 56 46.4
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 4.9e-08 60.8 73 37.0
THA.LOC104803186 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.9e-08 60.8 67 41.8
TPR.G29318 Trifolium pratense HOM05D000004 ORTHO05D000002 4.9e-08 60.8 71 43.7
SEGI_41256 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.5e-08 60.5 69 42.0
THA.LOC109116954 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.5e-08 60.5 68 41.2
MSTRG.16915 Avicennia marina HOM05D000004 ORTHO05D000002 8.4e-08 60.1 67 43.3
Sabra15G0034200 Salix brachista HOM05D000004 ORTHO05D000002 8.4e-08 60.1 70 44.3
Sabra19G0098600 Salix brachista HOM05D000004 ORTHO05D000002 8.4e-08 60.1 70 44.3
THA.LOC109117175 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 8.4e-08 60.1 70 37.1
Cpa.g.sc22.44 Carica papaya HOM05D000004 ORTHO05D000002 1.1e-07 59.7 67 38.8
Hma1.2p1_1832F.1_g304590 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.1e-07 59.7 70 40.0
Lj5g0018135 Lotus japonicus HOM05D000004 ORTHO05D000002 1.1e-07 59.7 73 41.1
Cpa.g.sc782.1 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-07 59.3 67 37.3
Sed0009597 Sechium edule HOM05D010826 ORTHO05D013073 1.4e-07 59.3 67 41.8
THA.LOC109116762 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.4e-07 59.3 70 35.7
TPR.G31041 Trifolium pratense HOM05D000004 ORTHO05D000002 1.4e-07 59.3 71 43.7
Cpa.g.sc175.3 Carica papaya HOM05D000004 ORTHO05D000002 1.9e-07 58.9 37 67.6
Cpa.g.sc2836.1 Carica papaya HOM05D000004 ORTHO05D000002 1.9e-07 58.9 73 39.7
ECA240G3660 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-07 58.9 59 45.8
PGR031G3733 Punica granatum HOM05D000004 ORTHO05D000563 1.9e-07 58.9 71 38.0
ECA240G4601 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-07 58.5 65 43.1
Cpa.g.sc225.2 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-07 58.2 71 33.8
SEGI_32357 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 3.2e-07 58.2 62 45.2
SEGI_03591 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.2e-07 57.8 64 46.9
MSTRG.15820 Avicennia marina HOM05D000004 ORTHO05D000002 5.5e-07 57.4 73 37.0
Cpa.g.sc28.154 Carica papaya HOM05D000004 ORTHO05D000563 5.5e-07 57.4 62 41.9
Cpa.g.sc3165.1 Carica papaya HOM05D000004 ORTHO05D000002 5.5e-07 57.4 64 40.6
Cpa.g.sc39.68 Carica papaya HOM05D000004 ORTHO05D000002 5.5e-07 57.4 71 36.6
Cpa.g.sc60.61 Carica papaya HOM05D000004 ORTHO05D000563 5.5e-07 57.4 62 38.7
Thhalv10015409m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 5.5e-07 57.4 62 46.8
SHI37133 Sapria himalayana HOM05D000004 ORTHO05D000002 5.5e-07 57.4 63 42.9
SEGI_08082 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 5.5e-07 57.4 59 42.4
PSO782G3203 Papaver somniferum HOM05D000004 ORTHO05D000002 7.1e-07 57.0 59 47.5
SEGI_05785 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.1e-07 57.0 63 38.1
SEGI_36664 Sequoiadendron giganteum HOM05D008617 ORTHO05D000002 7.1e-07 57.0 69 40.6
SEGI_12037 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 9.3e-07 56.6 66 40.9
SEGI_40184 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 9.3e-07 56.6 67 37.3
Cpa.g.sc1849.2 Carica papaya HOM05D000004 ORTHO05D000002 1.2e-06 56.2 67 35.8
SHI35363 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-06 56.2 63 42.9
SHI47348 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-06 56.2 63 41.3
SHI47656 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-06 56.2 63 41.3
SEGI_02294 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.2e-06 56.2 63 41.3
THA.LOC104805025 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.2e-06 56.2 71 38.0
Cpa.g.sc445.1 Carica papaya HOM05D000004 ORTHO05D000002 1.6e-06 55.8 64 39.1
PSO356G0054 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-06 55.8 65 43.1
PGR142G4213 Punica granatum HOM05D000004 ORTHO05D000002 1.6e-06 55.8 73 35.6
SHI37899 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 55.8 63 42.9
SHI47695 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 55.8 71 38.0
SHI47922 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 55.8 63 42.9
SHI48036 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 55.8 63 42.9
SHI49270 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 55.8 63 42.9
SHI50248 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 55.8 63 42.9
SHI51310 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-06 55.8 63 42.9
SEGI_10638 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-06 55.8 59 44.1
Cpa.g.sc0.191 Carica papaya HOM05D000004 ORTHO05D000002 2.1e-06 55.5 67 37.3
FvH4_4g08352 Fragaria vesca HOM05D000004 ORTHO05D000002 2.1e-06 55.5 65 40.0
PGR083G0982 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-06 55.5 62 37.1
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 2.1e-06 55.5 71 38.0
SHI50602 Sapria himalayana HOM05D000004 ORTHO05D000002 2.1e-06 55.5 63 42.9
THA.LOC104804857 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.1e-06 55.5 48 50.0
TPR.G29503 Trifolium pratense HOM05D000004 ORTHO05D000002 2.1e-06 55.5 64 43.8
CSS0030845 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.7e-06 55.1 70 35.7
Cpa.g.sc88.32 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-06 55.1 66 34.8
ECA238G1641 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-06 55.1 51 47.1
ECA246G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-06 55.1 51 47.1
Hma1.2p1_0021F.1_g014260 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.7e-06 55.1 52 44.2
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 2.7e-06 55.1 73 35.6
Cpa.g.sc210.8 Carica papaya HOM05D000004 ORTHO05D000002 3.5e-06 54.7 64 37.5
Cpa.g.sc35.87 Carica papaya HOM05D000004 ORTHO05D000002 3.5e-06 54.7 37 64.9
HanXRQChr15g0494091 Helianthus annuus HOM05D000004 ORTHO05D000002 3.5e-06 54.7 70 42.9
AUR62018883 Chenopodium quinoa HOM05D010259 ORTHO05D015598 4.6e-06 54.3 59 45.8
ECA246G3946 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.6e-06 54.3 68 42.6
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 4.6e-06 54.3 59 44.1
Rhsim04G0004700 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.6e-06 54.3 70 35.7
SEGI_30120 Sequoiadendron giganteum HOM05D000141 ORTHO05D004038 4.6e-06 54.3 59 40.7
SEGI_31812 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.6e-06 54.3 58 44.8
TWI18G1168 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.6e-06 54.3 55 45.5
Ca_27390_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 6.0e-06 53.9 71 38.0
ECA236G0673 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.0e-06 53.9 59 40.7
ECA238G2594 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.0e-06 53.9 55 41.8
ECA240G2139 Erigeron canadensis HOM05D000006 ORTHO05D000002 6.0e-06 53.9 69 43.5
SEGI_35377 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 6.0e-06 53.9 63 36.5
THA.LOC109117145 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 6.0e-06 53.9 54 40.7
Cpa.g.sc11.80 Carica papaya HOM05D000004 ORTHO05D000002 7.9e-06 53.5 51 45.1
PGR004G1243 Punica granatum HOM05D000004 ORTHO05D000002 7.9e-06 53.5 73 38.4
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 7.9e-06 53.5 60 41.7
SHI44504 Sapria himalayana HOM05D000004 ORTHO05D000002 7.9e-06 53.5 63 41.3


User provided reference genes

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