Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc94.50 Carica papaya HOM05D001053 ORTHO05D004820 3.1e-113 411.8 200 100.0
COL.COLO4_06864 Corchorus olitorius HOM05D001053 ORTHO05D004820 1.0e-87 327.0 200 77.0
Duzib205G1512 Durio zibethinus HOM05D001053 ORTHO05D004820 3.8e-87 325.1 200 76.5
Thecc.03G101100 Theobroma cacao HOM05D001053 ORTHO05D004820 4.2e-86 321.6 199 77.4
Gorai.003G101100 Gossypium raimondii HOM05D001053 ORTHO05D004820 1.2e-85 320.1 200 76.0
Duzib068G1187 Durio zibethinus HOM05D001053 ORTHO05D004820 7.9e-85 317.4 200 76.0
Sabra04G0062400 Salix brachista HOM05D001053 ORTHO05D004820 8.2e-82 307.4 199 72.4
Gohir.A03G069900 Gossypium hirsutum HOM05D001053 ORTHO05D004820 1.4e-81 306.6 192 74.5
TWI81G0708 Tripterygium wilfordii HOM05D001053 ORTHO05D004820 9.1e-81 303.9 200 72.5
Dinv17408 Davidia involucrata HOM05D001053 ORTHO05D004820 6.5e-79 297.7 200 71.5
Potri.004G092900 Populus trichocarpa HOM05D001053 ORTHO05D004820 8.5e-79 297.4 199 70.9
Eucgr.L02060 Eucalyptus grandis HOM05D001053 ORTHO05D004820 4.2e-78 295.0 200 68.5
vmacro17607 Vaccinium macrocarpon HOM05D001053 ORTHO05D004820 4.2e-78 295.0 200 69.5
GSVIVG01007870001 Vitis vinifera HOM05D001053 ORTHO05D004820 4.2e-78 295.0 200 70.5
Eucgr.K02528 Eucalyptus grandis HOM05D001053 ORTHO05D004820 5.5e-78 294.7 200 68.5
Atru.chr9.430 Acer truncatum HOM05D001053 ORTHO05D004820 2.3e-76 289.3 200 69.5
Eucgr.B01265 Eucalyptus grandis HOM05D001053 ORTHO05D004820 2.3e-76 289.3 200 67.5
Actinidia04826 Actinidia chinensis HOM05D001053 ORTHO05D004820 3.0e-76 288.9 200 70.0
Ciclev10019240m.g Citrus clementina HOM05D001053 ORTHO05D004820 3.0e-76 288.9 200 68.5
Sc04g0004320 Simmondsia chinensis HOM05D001053 ORTHO05D004820 4.4e-75 285.0 200 65.0
Lsat_1_v5_gn_4_111000 Lactuca sativa HOM05D001053 ORTHO05D004820 7.4e-75 284.3 200 66.0
Hund02590 Selenicereus undatus HOM05D001053 ORTHO05D004820 1.7e-74 283.1 200 67.0
Oeu031813.2 Olea europaea HOM05D001053 ORTHO05D004820 2.2e-74 282.7 200 69.0
Manes.06G085100 Manihot esculenta HOM05D001053 ORTHO05D004820 2.8e-74 282.3 205 65.4
Eucgr.K02530 Eucalyptus grandis HOM05D001053 ORTHO05D004820 4.8e-74 281.6 200 66.0
Lj5C103T5 Lonicera japonica HOM05D001053 ORTHO05D004820 6.3e-74 281.2 200 69.5
Nn3g17442 Nelumbo nucifera HOM05D001053 ORTHO05D004820 1.1e-73 280.4 200 66.0
Peaxi162Scf00201g00236 Petunia axillaris HOM05D001053 ORTHO05D004820 2.4e-73 279.3 200 67.5
Rhsim08G0146300 Rhododendron simsii HOM05D001053 ORTHO05D004820 6.9e-73 277.7 200 68.0
Nitab4.5_0012564g0010 Nicotiana tabacum HOM05D001053 ORTHO05D004820 1.5e-72 276.6 200 64.0
HanXRQChr16g0502421 Helianthus annuus HOM05D001053 ORTHO05D004820 4.5e-72 275.0 200 64.5
PGR044G1429 Punica granatum HOM05D001053 ORTHO05D004820 4.5e-72 275.0 200 65.5
CiPaw.11G052800 Carya illinoinensis HOM05D001053 ORTHO05D004820 1.7e-71 273.1 200 65.0
Cc00_g07600 Coffea canephora HOM05D001053 ORTHO05D004820 3.8e-71 271.9 200 64.0
Nitab4.5_0001485g0180 Nicotiana tabacum HOM05D001053 ORTHO05D004820 3.8e-71 271.9 200 63.5
Hma1.2p1_0060F.1_g033160 Hydrangea macrophylla HOM05D001053 ORTHO05D004820 6.5e-71 271.2 199 65.3
Solyc03g115150.4 Solanum lycopersicum HOM05D001053 ORTHO05D004820 6.5e-71 271.2 197 65.5
MSTRG.22987 Avicennia marina HOM05D001053 ORTHO05D004820 1.1e-70 270.4 197 63.5
THA.LOC104801191 Tarenaya hassleriana HOM05D001053 ORTHO05D004820 1.1e-70 270.4 201 66.2
Thhalv10003787m.g Eutrema salsugineum HOM05D001053 ORTHO05D004820 2.5e-70 269.2 200 65.5
QL10p019416 Quercus lobata HOM05D001053 ORTHO05D004820 2.5e-70 269.2 199 65.3
RcHm_v2.0_Chr7g0183031 Rosa chinensis HOM05D001053 ORTHO05D004820 2.5e-70 269.2 201 63.2
FAN08G0910 Fragaria x ananassa HOM05D001053 ORTHO05D004820 3.2e-70 268.9 205 63.9
Prupe.5G204500 Prunus persica HOM05D001053 ORTHO05D004820 4.2e-70 268.5 203 66.5
TAR629G3345 Trochodendron aralioides HOM05D001053 ORTHO05D004820 7.2e-70 267.7 240 57.1
FvH4_5g13910 Fragaria vesca HOM05D001053 ORTHO05D004820 1.6e-69 266.5 201 63.7
FAN13G0112 Fragaria x ananassa HOM05D001053 ORTHO05D004820 2.7e-69 265.8 201 63.2
Aqoxy3G03637 Aquilegia oxysepala HOM05D001053 ORTHO05D004820 7.9e-69 264.2 200 63.5
FAN18G3650 Fragaria x ananassa HOM05D001053 ORTHO05D004820 7.9e-69 264.2 201 63.2
CAN.G1228.29 Capsicum annuum HOM05D001053 ORTHO05D004820 1.4e-68 263.5 197 63.5
Cfa019326 Carpinus fangiana HOM05D001053 ORTHO05D004820 2.3e-68 262.7 200 63.5
MELO3C017221.2 Cucumis melo HOM05D001053 ORTHO05D004820 2.3e-68 262.7 201 61.2
Lalb_Chr12g0197171 Lupinus albus HOM05D001053 ORTHO05D004820 3.9e-68 261.9 200 65.0
Sopen03g034210 Solanum pennellii HOM05D001053 ORTHO05D004820 3.9e-68 261.9 197 64.0
CARHR274760 Cardamine hirsuta HOM05D001053 ORTHO05D004820 5.2e-68 261.5 201 63.7
CsaV3_1G002870 Cucumis sativus L. HOM05D001053 ORTHO05D004820 6.7e-68 261.2 201 61.2
Carub.0008s2174 Capsella rubella HOM05D001053 ORTHO05D004820 8.8e-68 260.8 200 64.0
ClCG06G015680 Citrullus lanatus HOM05D001053 ORTHO05D004820 8.8e-68 260.8 201 61.2
MD14G1211400 Malus domestica HOM05D001053 ORTHO05D004820 8.8e-68 260.8 194 60.8
AT5G61060 Arabidopsis thaliana HOM05D001053 ORTHO05D004820 1.1e-67 260.4 200 64.0
Sp2g24350 Schrenkiella parvula HOM05D001053 ORTHO05D004820 2.0e-67 259.6 200 63.5
BolC7t45003H Brassica oleracea HOM05D001053 ORTHO05D004820 3.3e-67 258.8 200 63.0
ECA232G4674 Erigeron canadensis HOM05D001053 ORTHO05D004820 5.7e-67 258.1 200 60.0
PSO017G5497 Papaver somniferum HOM05D001053 ORTHO05D004820 5.7e-67 258.1 200 60.5
C07p44790 Brassica napus HOM05D001053 ORTHO05D004820 7.4e-67 257.7 200 63.0
AL8G37710 Arabidopsis lyrata HOM05D001053 ORTHO05D004820 9.7e-67 257.3 200 63.5
Carub.0008s2175 Capsella rubella HOM05D001053 ORTHO05D004820 1.7e-66 256.5 200 62.5
A03p46750 Brassica napus HOM05D001053 ORTHO05D004820 1.4e-65 253.4 200 61.0
BraA03t13797Z Brassica rapa HOM05D001053 ORTHO05D004820 1.4e-65 253.4 200 61.0
Glyma.05G021400 Glycine max HOM05D001053 ORTHO05D004820 3.1e-65 252.3 195 63.6
Lj4g0023799 Lotus japonicus HOM05D001053 ORTHO05D004820 9.1e-65 250.8 200 63.0
Aa31LG11G2250 Aethionema arabicum HOM05D001053 ORTHO05D004820 1.2e-64 250.4 201 60.2
Medtr4g109500 Medicago truncatula HOM05D001053 ORTHO05D004820 2.0e-64 249.6 200 61.0
Sed0006061 Sechium edule HOM05D001053 ORTHO05D004820 2.0e-64 249.6 199 60.8
EL10Ac5g11123 Beta vulgaris HOM05D001053 ORTHO05D004820 2.6e-64 249.2 200 59.5
MD06G1202300 Malus domestica HOM05D001053 ORTHO05D004820 2.6e-64 249.2 196 60.2
Phvul.003G185200 Phaseolus vulgaris HOM05D001053 ORTHO05D004820 3.5e-64 248.8 196 60.7
CANSAT80G2151 Cannabis sativa HOM05D001053 ORTHO05D004820 4.5e-64 248.4 201 62.2
AUR62008521 Chenopodium quinoa HOM05D001053 ORTHO05D004820 7.7e-64 247.7 200 58.0
DCAR_011558 Daucus carota HOM05D001053 ORTHO05D004820 1.3e-63 246.9 175 65.7
VMungo1215G0855 Vigna mungo HOM05D001053 ORTHO05D004820 2.9e-63 245.7 195 62.1
Ah.11g047830 Amaranthus hybridus HOM05D001053 ORTHO05D004820 3.8e-63 245.4 200 58.5
PGSC0003DMG400024639 Solanum tuberosum HOM05D001053 ORTHO05D004820 5.0e-63 245.0 183 63.4
Glyma.17G078000 Glycine max HOM05D001053 ORTHO05D004820 6.5e-63 244.6 195 61.5
AUR62021568 Chenopodium quinoa HOM05D001053 ORTHO05D004820 8.5e-63 244.2 200 57.0
Haze_07717 Corylus avellana HOM05D001053 ORTHO05D004820 2.5e-62 242.7 249 51.0
arahy.Tifrunner.gnm1.ann1.30WRMH Arachis hypogaea HOM05D001053 ORTHO05D004820 4.2e-62 241.9 195 61.0
TPR.G2048 Trifolium pratense HOM05D001053 ORTHO05D004820 4.2e-62 241.9 200 61.0
arahy.Tifrunner.gnm1.ann1.EY28RQ Arachis hypogaea HOM05D001053 ORTHO05D004820 7.2e-62 241.1 195 61.0
BcaC04g23464 Brassica carinata HOM05D001053 ORTHO05D004820 9.4e-62 240.7 199 58.8
BolC9t53720H Brassica oleracea HOM05D001053 ORTHO05D004820 9.4e-62 240.7 199 58.8
BraA09t36371Z Brassica rapa HOM05D001053 ORTHO05D004820 9.4e-62 240.7 199 59.3
BraA09t36370Z Brassica rapa HOM05D001053 ORTHO05D004820 2.7e-61 239.2 208 58.7
Ca_21779_v3 Cicer arietinum L. HOM05D001053 ORTHO05D004820 2.7e-61 239.2 195 61.0
AT5G61050 Arabidopsis thaliana HOM05D001053 ORTHO05D004820 4.7e-61 238.4 200 58.5
C09p08060 Brassica napus HOM05D001053 ORTHO05D004820 4.7e-61 238.4 199 58.3
unitig_26.g9658 Utricularia gibba HOM05D001053 ORTHO05D004820 1.0e-60 237.3 196 58.7
A09p07210 Brassica napus HOM05D001053 ORTHO05D004820 1.4e-60 236.9 224 55.4
Psat0s3618g0040 Pisum sativum HOM05D001053 ORTHO05D004820 1.8e-60 236.5 199 58.3
Zm00001eb108570 Zea mays HOM05D001053 ORTHO05D004820 2.7e-56 222.6 208 51.9
HPP92_006052 Vanilla planifolia HOM05D001053 ORTHO05D004820 3.8e-55 218.8 178 56.2
Os07g0602200 Oryza sativa ssp. japonica HOM05D001053 ORTHO05D004820 5.0e-55 218.4 208 49.5
CDE02G2613 Ceratophyllum demersum HOM05D001053 ORTHO05D004820 1.1e-54 217.2 200 55.0
BcaC06g33180 Brassica carinata HOM05D001053 ORTHO05D004820 4.2e-54 215.3 201 55.7
BcaC04g23465 Brassica carinata HOM05D001053 ORTHO05D004820 8.6e-47 191.0 205 52.7
Gohir.D03G096500 Gossypium hirsutum HOM05D001053 ORTHO05D004820 3.3e-46 189.1 125 72.0
SGA_v2.0_scaffold313G48312 Striga asiatica HOM05D000001 ORTHO05D004820 8.3e-42 174.5 195 44.6
C09p08050 Brassica napus HOM05D001053 ORTHO05D004820 7.0e-41 171.4 200 49.0
SMO203G0267 Selaginella moellendorffii HOM05D001053 ORTHO05D004820 9.2e-41 171.0 191 42.9
Pp3c14_21020 Physcomitrium patens HOM05D001053 ORTHO05D004820 2.9e-39 166.0 194 42.3
Mapoly0023s0094 Marchantia polymorpha HOM05D001053 ORTHO05D004820 2.8e-37 159.5 204 41.2
ATR0064G039 Amborella trichopoda HOM05D001053 ORTHO05D004820 1.4e-36 157.1 143 51.7
BolC9t53719H Brassica oleracea HOM05D001053 ORTHO05D004820 7.0e-33 144.8 183 48.6
CBR_g20016 Chara braunii HOM05D001053 ORTHO05D004820 3.2e-25 119.4 202 35.6
MCO07G211 Micromonas commoda HOM05D001053 ORTHO05D004820 6.0e-16 88.6 197 33.5
Migut.I00311 Erythranthe guttata HOM05D001053 ORTHO05D004820 1.2e-08 64.3 53 64.2


User provided reference genes

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