Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 1.2e-115 419.9 214 100.0
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 8.0e-51 204.5 146 72.6
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 4.4e-49 198.7 147 67.3
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 8.3e-48 194.5 146 70.5
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 5.4e-47 191.8 146 68.5
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 9.2e-47 191.0 142 71.1
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 1.2e-46 190.7 201 55.2
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 1.6e-46 190.3 143 69.9
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 1.0e-45 187.6 153 64.7
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 1.3e-45 187.2 215 50.2
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 1.3e-45 187.2 158 65.2
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 1.3e-45 187.2 190 56.8
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 1.7e-45 186.8 168 61.3
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 2.3e-45 186.4 145 68.3
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 1.5e-44 183.7 171 59.6
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 3.3e-44 182.6 123 74.8
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 3.3e-44 182.6 146 67.1
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 5.6e-44 181.8 182 54.4
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 5.6e-44 181.8 174 58.0
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 7.3e-44 181.4 143 67.8
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 9.5e-44 181.0 145 66.9
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 1.2e-43 180.6 145 67.6
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 1.6e-43 180.3 174 57.5
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 6.1e-43 178.3 148 63.5
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 1.0e-42 177.6 183 55.2
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 1.0e-42 177.6 181 54.1
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 2.3e-42 176.4 191 53.9
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 2.3e-42 176.4 152 61.8
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 5.2e-42 175.3 184 56.5
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 8.9e-42 174.5 147 65.3
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 8.9e-42 174.5 115 76.5
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 8.9e-42 174.5 160 60.6
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 8.9e-42 174.5 178 53.9
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 1.5e-41 173.7 146 63.0
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 1.5e-41 173.7 133 66.9
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 2.6e-41 172.9 99 85.9
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 3.4e-41 172.6 183 53.0
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 3.4e-41 172.6 183 53.0
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 5.7e-41 171.8 171 56.1
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 5.7e-41 171.8 131 67.2
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 5.7e-41 171.8 188 53.2
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 7.5e-41 171.4 188 53.2
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 7.5e-41 171.4 146 61.6
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 7.5e-41 171.4 146 62.3
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.3e-40 170.6 175 55.4
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 1.3e-40 170.6 197 51.8
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 1.7e-40 170.2 183 52.5
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.2e-40 169.9 122 69.7
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 2.2e-40 169.9 111 73.9
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 3.7e-40 169.1 187 52.9
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 4.9e-40 168.7 146 58.9
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 4.9e-40 168.7 202 49.5
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 8.3e-40 167.9 141 63.8
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 1.1e-39 167.5 178 54.5
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 1.4e-39 167.2 186 52.2
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 1.4e-39 167.2 167 55.1
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.8e-39 166.8 121 68.6
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 2.4e-39 166.4 142 62.0
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 5.4e-39 165.2 146 59.6
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 7.0e-39 164.9 186 51.6
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 1.2e-38 164.1 127 64.6
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 1.6e-38 163.7 100 80.0
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 2.7e-38 162.9 136 62.5
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 1.3e-37 160.6 99 79.8
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 3.9e-37 159.1 141 61.7
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 8.6e-37 157.9 174 53.4
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 1.9e-36 156.8 107 72.0
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 1.9e-36 156.8 173 50.9
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 4.3e-36 155.6 173 50.9
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 5.6e-36 155.2 119 68.1
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 9.5e-36 154.5 117 68.4
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 2.1e-35 153.3 133 60.2
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 1.4e-34 150.6 159 54.7
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 1.4e-34 150.6 121 62.8
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.8e-34 150.2 124 62.9
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 8.9e-34 147.9 109 69.7
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 2.0e-33 146.7 114 66.7
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 7.5e-33 144.8 103 65.0
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 2.2e-24 116.7 115 55.7
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 2.9e-24 116.3 185 38.9
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 1.1e-20 104.4 63 84.1
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 2.5e-20 103.2 68 75.0
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.8e-18 97.1 108 47.2
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 3.5e-14 82.8 75 56.0
Nn1g01396 Nelumbo nucifera HOM05D001674 ORTHO05D008599 4.9e-08 62.4 52 71.2
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 3.5e-06 56.2 90 35.6


User provided reference genes

Program Settings