Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.45 Carica papaya HOM05D006035 ORTHO05D007155 4.6e-51 204.9 161 100.0
COL.COLO4_34598 Corchorus olitorius HOM05D006035 ORTHO05D007155 5.7e-25 118.2 162 45.7
Lalb_Chr13g0298531 Lupinus albus HOM05D006035 ORTHO05D007155 4.8e-24 115.2 162 43.8
Duzib212G0974 Durio zibethinus HOM05D006035 ORTHO05D007155 3.1e-23 112.5 162 44.4
Gohir.A09G234100 Gossypium hirsutum HOM05D006035 ORTHO05D007155 3.1e-23 112.5 163 44.8
Gohir.D09G234900 Gossypium hirsutum HOM05D006035 ORTHO05D007155 5.3e-23 111.7 163 44.2
Gorai.006G257800 Gossypium raimondii HOM05D006035 ORTHO05D007155 9.1e-23 110.9 163 44.2
Thecc.04G302600 Theobroma cacao HOM05D006035 ORTHO05D007155 9.1e-23 110.9 165 42.4
VMungo1215G2980 Vigna mungo HOM05D006035 ORTHO05D007155 1.5e-22 110.2 159 44.0
Dinv44276 Davidia involucrata HOM05D006035 ORTHO05D007155 2.6e-22 109.4 154 42.2
Phvul.003G115800 Phaseolus vulgaris HOM05D006035 ORTHO05D007155 4.5e-22 108.6 159 44.7
CARHR182020 Cardamine hirsuta HOM05D006035 ORTHO05D007155 7.7e-22 107.8 155 43.2
Phvul.005G129600 Phaseolus vulgaris HOM05D006035 ORTHO05D007155 1.7e-21 106.7 159 43.4
Glyma.17G034900 Glycine max HOM05D006035 ORTHO05D007155 2.9e-21 105.9 159 42.8
TWI09G1568 Tripterygium wilfordii HOM05D006035 ORTHO05D007155 3.8e-21 105.5 162 42.0
Duzib151G0686 Durio zibethinus HOM05D006035 ORTHO05D007155 6.5e-21 104.8 161 43.5
Gohir.A10G173200 Gossypium hirsutum HOM05D006035 ORTHO05D007155 8.5e-21 104.4 163 42.9
QL06p012626 Quercus lobata HOM05D006035 ORTHO05D007155 1.1e-20 104.0 160 42.5
Medtr4g122260 Medicago truncatula HOM05D006035 ORTHO05D007155 2.5e-20 102.8 159 41.5
Manes.15G000900 Manihot esculenta HOM05D006035 ORTHO05D007155 4.2e-20 102.1 161 68.3
Gohir.D10G179700 Gossypium hirsutum HOM05D006035 ORTHO05D007155 5.5e-20 101.7 158 44.3
Atru.chr4.3040 Acer truncatum HOM05D006035 ORTHO05D007155 7.2e-20 101.3 163 44.8
Rhsim04G0240200 Rhododendron simsii HOM05D006035 ORTHO05D007155 7.2e-20 101.3 157 42.0
Cfa015301 Carpinus fangiana HOM05D006035 ORTHO05D007155 9.4e-20 100.9 162 41.4
Lalb_Chr07g0182041 Lupinus albus HOM05D006035 ORTHO05D007155 9.4e-20 100.9 161 41.0
Haze_01313 Corylus avellana HOM05D006035 ORTHO05D007155 1.2e-19 100.5 162 42.0
Duzib052G0321 Durio zibethinus HOM05D006035 ORTHO05D007155 1.2e-19 100.5 157 51.0
Lj1g0017970 Lotus japonicus HOM05D006035 ORTHO05D007155 1.2e-19 100.5 165 41.8
Sp2g19800 Schrenkiella parvula HOM05D006035 ORTHO05D007155 1.6e-19 100.1 161 40.4
SpUn0021_0050 Schrenkiella parvula HOM05D006035 ORTHO05D007155 1.6e-19 100.1 161 40.4
BcaC04g23738 Brassica carinata HOM05D006035 ORTHO05D007155 2.7e-19 99.4 157 41.4
C09p05220 Brassica napus HOM05D006035 ORTHO05D007155 2.7e-19 99.4 157 41.4
Actinidia31554 Actinidia chinensis HOM05D006035 ORTHO05D007155 3.6e-19 99.0 159 50.3
BolC9t53448H Brassica oleracea HOM05D006035 ORTHO05D007155 3.6e-19 99.0 157 41.4
BcaB04g19614 Brassica carinata HOM05D006035 ORTHO05D007155 4.7e-19 98.6 157 40.8
RcHm_v2.0_Chr4g0425671 Rosa chinensis HOM05D006035 ORTHO05D007155 4.7e-19 98.6 163 40.5
Aa31LG11G8120 Aethionema arabicum HOM05D006035 ORTHO05D007155 6.1e-19 98.2 155 38.1
FvH4_4g19970 Fragaria vesca HOM05D006035 ORTHO05D007155 6.1e-19 98.2 159 40.3
Gorai.011G201000 Gossypium raimondii HOM05D006035 ORTHO05D007155 6.1e-19 98.2 158 42.4
vmacro08029 Vaccinium macrocarpon HOM05D006035 ORTHO05D007155 7.9e-19 97.8 157 42.0
TWI53G1140 Tripterygium wilfordii HOM05D006035 ORTHO05D007155 1.0e-18 97.4 161 40.4
AL8G23240 Arabidopsis lyrata HOM05D006035 ORTHO05D007155 1.8e-18 96.7 158 41.1
A09p04840 Brassica napus HOM05D006035 ORTHO05D007155 1.8e-18 96.7 157 40.1
Potri.008G103900 Populus trichocarpa HOM05D006035 ORTHO05D007155 1.8e-18 96.7 170 40.0
Rhsim02G0003100 Rhododendron simsii HOM05D006035 ORTHO05D007155 3.0e-18 95.9 156 41.7
AT5G49480 Arabidopsis thaliana HOM05D006035 ORTHO05D007155 3.9e-18 95.5 157 39.5
BraA09t36121Z Brassica rapa HOM05D006035 ORTHO05D007155 3.9e-18 95.5 157 40.1
CANSAT78G2193 Cannabis sativa HOM05D006035 ORTHO05D007155 3.9e-18 95.5 163 38.7
MD13G1151300 Malus domestica HOM05D006035 ORTHO05D007155 6.7e-18 94.7 162 40.1
Psat0s4013g0040 Pisum sativum HOM05D006035 ORTHO05D007155 6.7e-18 94.7 155 43.9
TPR.G25406 Trifolium pratense HOM05D006035 ORTHO05D007155 6.7e-18 94.7 159 39.6
Eucgr.H04056 Eucalyptus grandis HOM05D006035 ORTHO05D007155 8.8e-18 94.4 192 42.2
MD16G1152300 Malus domestica HOM05D006035 ORTHO05D007155 8.8e-18 94.4 162 39.5
Sabra08G0078500 Salix brachista HOM05D006035 ORTHO05D007155 8.8e-18 94.4 170 40.6
PGR004G1138 Punica granatum HOM05D006035 ORTHO05D007155 2.0e-17 93.2 160 38.1
CSS0018156 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 2.6e-17 92.8 155 67.7
CSS0043064 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 2.6e-17 92.8 157 42.7
CSS0012943 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 3.3e-17 92.4 162 39.5
Ca_21435_v3 Cicer arietinum L. HOM05D006035 ORTHO05D007155 3.3e-17 92.4 154 40.3
Potri.010G146900 Populus trichocarpa HOM05D006035 ORTHO05D007155 3.3e-17 92.4 154 40.9
Sabra10G0113300 Salix brachista HOM05D006035 ORTHO05D007155 3.3e-17 92.4 170 39.4
MELO3C006721.2 Cucumis melo HOM05D006035 ORTHO05D007155 4.4e-17 92.0 159 38.4
ClCG05G006630 Citrullus lanatus HOM05D006035 ORTHO05D007155 7.4e-17 91.3 159 39.6
Oeu038775.1 Olea europaea HOM05D006035 ORTHO05D007155 7.4e-17 91.3 155 40.6
Oeu038777.1 Olea europaea HOM05D006035 ORTHO05D007155 7.4e-17 91.3 155 40.6
CSS0047932 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 9.7e-17 90.9 162 39.5
Sed0018605 Sechium edule HOM05D006035 ORTHO05D007155 9.7e-17 90.9 162 39.5
Migut.G00072 Erythranthe guttata HOM05D006035 ORTHO05D007155 1.3e-16 90.5 158 36.7
DCAR_030462 Daucus carota HOM05D006035 ORTHO05D007155 2.2e-16 89.7 155 38.1
PGR031G3428 Punica granatum HOM05D006035 ORTHO05D007155 2.2e-16 89.7 163 42.9
CiPaw.01G137000 Carya illinoinensis HOM05D006035 ORTHO05D007155 2.8e-16 89.4 164 39.6
CsaV3_3G015240 Cucumis sativus L. HOM05D006035 ORTHO05D007155 2.8e-16 89.4 164 39.6
Ciclev10006076m.g Citrus clementina HOM05D006035 ORTHO05D007155 3.7e-16 89.0 165 39.4
THA.LOC104818878 Tarenaya hassleriana HOM05D006035 ORTHO05D007155 6.3e-16 88.2 160 38.8
Glyma.07G238700 Glycine max HOM05D006035 ORTHO05D007155 1.1e-15 87.4 154 39.6
FAN07G1803 Fragaria x ananassa HOM05D006035 ORTHO05D007155 1.4e-15 87.0 164 52.4
Hma1.2p1_0013F.1_g008420 Hydrangea macrophylla HOM05D006035 ORTHO05D007155 2.4e-15 86.3 144 40.3
Oeu042670.1 Olea europaea HOM05D006035 ORTHO05D007155 3.1e-15 85.9 157 36.9
Carub.0008s0934 Capsella rubella HOM05D006035 ORTHO05D007155 4.1e-15 85.5 162 67.9
Manes.03G205900 Manihot esculenta HOM05D006035 ORTHO05D007155 4.1e-15 85.5 135 40.7
TAR633G1133 Trochodendron aralioides HOM05D006035 ORTHO05D007155 4.1e-15 85.5 159 37.1
SGA_v2.0_scaffold64G22102 Striga asiatica HOM05D006035 ORTHO05D007155 6.9e-15 84.7 158 36.1
Cc03_g00700 Coffea canephora HOM05D006035 ORTHO05D007155 9.1e-15 84.3 171 43.9
Nn3g21749 Nelumbo nucifera HOM05D006035 ORTHO05D007155 9.1e-15 84.3 164 36.6
Nitab4.5_0000931g0030 Nicotiana tabacum HOM05D006035 ORTHO05D007155 1.5e-14 83.6 161 33.5
MSTRG.10157 Avicennia marina HOM05D006035 ORTHO05D007155 7.7e-14 81.3 154 50.6
vmacro15178 Vaccinium macrocarpon HOM05D006035 ORTHO05D007155 7.7e-14 81.3 156 38.5
Prupe.1G115600 Prunus persica HOM05D006035 ORTHO05D007155 1.0e-13 80.9 151 69.5
EL10Ac3g05523 Beta vulgaris HOM05D006035 ORTHO05D007155 2.2e-13 79.7 160 35.0
Aqoxy2G02699 Aquilegia oxysepala HOM05D006035 ORTHO05D007155 2.9e-13 79.3 159 32.7
HanXRQChr11g0353881 Helianthus annuus HOM05D006035 ORTHO05D007155 6.5e-13 78.2 157 33.8
PGSC0003DMG400001204 Solanum tuberosum HOM05D006035 ORTHO05D007155 6.5e-13 78.2 161 33.5
Nitab4.5_0000655g0030 Nicotiana tabacum HOM05D006035 ORTHO05D007155 8.5e-13 77.8 158 32.9
PSO761G0247 Papaver somniferum HOM05D006035 ORTHO05D007155 8.5e-13 77.8 160 34.4
AUR62039264 Chenopodium quinoa HOM05D006035 ORTHO05D007155 1.1e-12 77.4 163 33.7
Sopen01g024580 Solanum pennellii HOM05D006035 ORTHO05D007155 1.1e-12 77.4 161 33.5
CSS0034436 Camellia sinensis var. sinensis HOM05D006035 ORTHO05D007155 1.4e-12 77.0 165 35.2
CAN.G97.9 Capsicum annuum HOM05D006035 ORTHO05D007155 1.4e-12 77.0 162 31.5
PSO210G7669 Papaver somniferum HOM05D006035 ORTHO05D007155 2.5e-12 76.3 160 35.0
TAR362G0119 Trochodendron aralioides HOM05D006035 ORTHO05D007155 2.5e-12 76.3 159 66.7
SalBow8G4845 Salvia bowleyana HOM05D006035 ORTHO05D007155 3.2e-12 75.9 158 34.8
Lsat_1_v5_gn_1_41620 Lactuca sativa HOM05D006035 ORTHO05D007155 7.2e-12 74.7 155 34.2
Peaxi162Scf00228g00041 Petunia axillaris HOM05D006035 ORTHO05D007155 2.7e-11 72.8 136 34.6
AUR62016225 Chenopodium quinoa HOM05D006035 ORTHO05D007155 3.6e-11 72.4 150 34.0
Oeu038773.1 Olea europaea HOM05D006035 ORTHO05D007155 4.7e-11 72.0 179 38.5
Ah.13g071330 Amaranthus hybridus HOM05D006035 ORTHO05D007155 6.1e-11 71.6 174 30.5
Sc19g0003080 Simmondsia chinensis HOM05D006035 ORTHO05D007155 2.3e-10 69.7 154 31.2
HanXRQChr05g0146001 Helianthus annuus HOM05D006035 ORTHO05D007155 1.5e-09 67.0 155 31.0
Solyc01g058720.4 Solanum lycopersicum HOM05D006035 ORTHO05D007155 2.6e-09 66.2 148 33.1
Oeu038774.1 Olea europaea HOM05D006035 ORTHO05D007155 4.4e-09 65.5 155 42.6
ECA246G4755 Erigeron canadensis HOM05D006035 ORTHO05D007155 9.7e-09 64.3 139 33.8
ATR0693G356 Amborella trichopoda HOM05D006035 ORTHO05D007155 1.7e-08 63.5 161 31.1
unitig_32.g11850 Utricularia gibba HOM05D006035 ORTHO05D007155 8.2e-08 61.2 157 31.2
QL06p006093 Quercus lobata HOM05D001729 ORTHO05D001155 2.4e-07 59.7 53 56.6
GSVIVG01034916001 Vitis vinifera HOM05D006035 ORTHO05D007155 2.4e-07 59.7 46 63.0
Lsat_1_v5_gn_6_116540 Lactuca sativa HOM05D006035 ORTHO05D007155 9.1e-07 57.8 158 32.9
HPP92_008930 Vanilla planifolia HOM05D006035 ORTHO05D007155 1.2e-06 57.4 160 30.6
MD04G1036600 Malus domestica HOM05D006035 ORTHO05D007155 2.0e-06 56.6 46 56.5
CDE08G1648 Ceratophyllum demersum HOM05D006035 ORTHO05D007155 2.6e-06 56.2 64 48.4


User provided reference genes

Program Settings