Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 0.0e+00 1243.0 668 100.0
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 2.4e-231 805.8 671 66.3
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 2.3e-229 799.3 671 65.9
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 7.4e-228 794.3 676 63.3
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 5.3e-226 788.1 680 64.7
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 4.5e-225 785.0 680 64.4
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 2.1e-222 776.2 676 64.8
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 9.7e-220 767.3 583 70.3
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 1.3e-219 766.9 593 70.2
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 6.3e-219 764.6 592 69.1
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 1.1e-218 763.8 676 63.9
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 1.1e-218 763.8 679 62.2
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 5.0e-216 755.0 675 63.7
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 2.5e-215 752.7 675 63.7
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 3.6e-214 748.8 585 68.4
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 3.6e-214 748.8 677 62.0
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 4.6e-214 748.4 591 67.7
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 1.8e-213 746.5 581 69.2
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 1.1e-212 743.8 676 60.7
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 8.2e-211 737.6 577 69.0
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 3.4e-209 732.3 575 68.5
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 5.9e-209 731.5 573 69.3
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 1.0e-208 730.7 576 67.5
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 5.5e-207 724.9 573 66.7
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 7.2e-207 724.5 578 67.0
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 7.2e-207 724.5 652 63.0
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 1.2e-206 723.8 584 66.1
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 1.6e-206 723.4 667 61.9
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 2.1e-206 723.0 596 64.1
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 3.6e-206 722.2 575 67.8
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 1.1e-204 717.2 588 65.0
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 7.4e-204 714.5 664 60.8
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 1.3e-203 713.8 587 65.8
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 2.2e-203 713.0 552 70.5
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 1.8e-202 709.9 580 67.9
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 1.0e-200 704.1 675 57.6
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 1.7e-200 703.4 575 67.3
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 5.5e-199 698.4 668 59.0
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 5.5e-199 698.4 579 62.9
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 5.5e-199 698.4 677 57.2
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 4.7e-198 695.3 671 58.7
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 6.1e-198 694.9 596 65.9
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 2.3e-197 693.0 608 64.0
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 3.0e-197 692.6 584 65.1
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 3.9e-197 692.2 590 62.5
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.0e-196 689.9 675 57.2
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 2.6e-196 689.5 583 64.3
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 2.6e-196 689.5 675 59.1
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 5.7e-196 688.3 678 57.4
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 1.7e-195 686.8 586 61.8
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.7e-195 686.8 682 58.9
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 1.7e-195 686.8 661 59.5
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 2.2e-195 686.4 593 62.6
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 3.1e-194 682.6 589 63.2
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 7.0e-194 681.4 675 56.9
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.6e-193 680.2 593 62.9
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 4.5e-193 678.7 574 65.2
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 3.2e-191 672.5 598 60.7
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 5.5e-191 671.8 577 63.1
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 7.2e-191 671.4 672 56.1
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 2.7e-190 669.5 640 58.6
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 8.0e-190 667.9 578 60.4
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 2.3e-189 666.4 593 61.6
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 4.0e-189 665.6 682 57.0
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 1.2e-188 664.1 588 61.9
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 5.7e-188 661.8 680 57.1
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 7.5e-188 661.4 591 60.6
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 7.0e-186 654.8 588 60.5
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 2.0e-185 653.3 527 67.7
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 1.3e-184 650.6 592 60.8
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 2.2e-184 649.8 603 59.9
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 8.5e-184 647.9 530 66.2
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 1.1e-183 647.5 584 60.6
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 1.2e-182 644.0 679 55.4
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 1.2e-182 644.0 590 59.8
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.6e-182 642.5 587 60.0
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 1.5e-180 637.1 591 59.9
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 5.7e-180 635.2 583 60.0
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.7e-179 632.5 579 60.6
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.8e-178 630.2 560 62.5
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 1.8e-178 630.2 451 73.6
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 2.3e-176 623.2 571 60.8
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.6e-174 615.9 472 65.9
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 6.1e-174 615.1 578 59.0
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 1.2e-172 610.9 614 54.9
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 9.8e-172 607.8 587 57.1
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 2.0e-169 600.1 518 63.5
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 3.5e-169 599.4 580 56.4
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 7.8e-169 598.2 644 51.9
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 1.9e-167 593.6 440 70.5
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 7.3e-167 591.7 559 57.6
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 4.0e-165 585.9 581 56.3
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 8.9e-165 584.7 545 59.4
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 1.3e-155 554.3 552 55.3
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 8.1e-150 535.0 524 58.4
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 3.2e-146 523.1 571 50.1
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 4.3e-143 512.7 539 54.9
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 4.2e-122 443.0 611 44.7
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 3.1e-109 400.2 280 69.6
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 3.2e-82 310.5 620 36.0
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 3.2e-82 310.5 620 36.0
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 4.2e-66 256.9 441 37.4
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 8.6e-51 206.1 413 33.4
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 3.5e-36 157.5 139 58.3
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 6.2e-33 146.7 204 42.6
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 2.6e-23 114.8 164 45.1
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.1e-21 109.4 231 34.2
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 2.1e-17 95.1 208 32.2
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 2.9e-14 84.7 157 34.4
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.4e-13 81.6 291 31.6
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 8.7e-11 73.2 112 32.1
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 1.1e-10 72.8 368 25.0
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 4.3e-10 70.9 203 29.1
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 5.3e-08 63.9 192 29.2
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.6e-07 61.6 85 34.1
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 7.6e-07 60.1 121 28.9


User provided reference genes

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