Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc9.150 Carica papaya HOM05D004491 ORTHO05D006742 3.8e-235 817.8 412 100.0
TWI23G1267 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 6.6e-195 684.1 411 82.2
Sabra14G0101900 Salix brachista HOM05D004491 ORTHO05D006742 8.7e-195 683.7 411 81.5
Potri.014G135590 Populus trichocarpa HOM05D004491 ORTHO05D006742 1.6e-193 679.5 411 81.3
MELO3C005918.2 Cucumis melo HOM05D004491 ORTHO05D006742 2.4e-192 675.6 411 80.8
Manes.05G069700 Manihot esculenta HOM05D004491 ORTHO05D006742 2.0e-191 672.5 411 81.5
Atru.chr5.1296 Acer truncatum HOM05D004491 ORTHO05D006742 3.4e-191 671.8 411 80.3
ClCG01G000050 Citrullus lanatus HOM05D004491 ORTHO05D006742 1.7e-190 669.5 411 79.6
TWI14G1187 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 2.2e-190 669.1 411 80.8
AT3G63000 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 2.9e-190 668.7 410 79.8
CsaV3_5G000130 Cucumis sativus L. HOM05D004491 ORTHO05D006742 2.9e-190 668.7 411 79.8
Sabra02G0149400 Salix brachista HOM05D004491 ORTHO05D006742 2.9e-190 668.7 411 79.8
Prupe.8G251000 Prunus persica HOM05D004491 ORTHO05D006742 4.9e-190 667.9 412 79.4
Ciclev10011862m.g Citrus clementina HOM05D004491 ORTHO05D006742 6.4e-190 667.5 411 80.5
BcaC02g10333 Brassica carinata HOM05D004491 ORTHO05D006742 8.4e-190 667.2 411 78.6
C04p30230 Brassica napus HOM05D004491 ORTHO05D006742 8.4e-190 667.2 411 78.6
BolC4t24555H Brassica oleracea HOM05D004491 ORTHO05D006742 8.4e-190 667.2 411 78.6
RcHm_v2.0_Chr6g0292401 Rosa chinensis HOM05D004491 ORTHO05D006742 1.1e-189 666.8 411 78.6
Haze_04798 Corylus avellana HOM05D004491 ORTHO05D006742 4.2e-189 664.8 411 80.5
Potri.002G213600 Populus trichocarpa HOM05D004491 ORTHO05D006742 4.2e-189 664.8 411 79.1
CiPaw.07G098600 Carya illinoinensis HOM05D004491 ORTHO05D006742 7.1e-189 664.1 411 79.3
AL5G45780 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 9.3e-189 663.7 410 79.8
CSS0018382 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 1.6e-188 662.9 411 79.1
Phvul.001G201100 Phaseolus vulgaris HOM05D004491 ORTHO05D006742 1.6e-188 662.9 412 80.8
THA.LOC104817536 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 1.6e-188 662.9 412 79.6
Carub.0005s2965 Capsella rubella HOM05D004491 ORTHO05D006742 2.1e-188 662.5 410 78.5
Cfa006054 Carpinus fangiana HOM05D004491 ORTHO05D006742 6.0e-188 661.0 411 79.8
Glyma.03G207900 Glycine max HOM05D004491 ORTHO05D006742 1.0e-187 660.2 413 80.1
Sed0015582 Sechium edule HOM05D004491 ORTHO05D006742 1.3e-187 659.8 411 79.3
A04p00390 Brassica napus HOM05D004491 ORTHO05D006742 2.3e-187 659.1 411 77.6
VMungo1383G0326 Vigna mungo HOM05D004491 ORTHO05D006742 3.9e-187 658.3 412 79.9
Cc01_g20110 Coffea canephora HOM05D004491 ORTHO05D006742 5.1e-187 657.9 411 79.1
FvH4_2g24580 Fragaria vesca HOM05D004491 ORTHO05D006742 5.1e-187 657.9 411 78.6
BraA04t15757Z Brassica rapa HOM05D004491 ORTHO05D006742 6.6e-187 657.5 411 77.4
Glyma.19G205200 Glycine max HOM05D004491 ORTHO05D006742 6.6e-187 657.5 413 80.6
Aa31LG1G29390 Aethionema arabicum HOM05D004491 ORTHO05D006742 8.7e-187 657.1 411 78.3
QL12p023667 Quercus lobata HOM05D004491 ORTHO05D006742 1.1e-186 656.8 411 79.1
BcaB02g08082 Brassica carinata HOM05D004491 ORTHO05D006742 1.5e-186 656.4 411 76.9
Medtr7g107480 Medicago truncatula HOM05D004491 ORTHO05D006742 1.5e-186 656.4 413 78.7
Thecc.01G288700 Theobroma cacao HOM05D004491 ORTHO05D006742 2.5e-186 655.6 411 78.3
FAN20G1381 Fragaria x ananassa HOM05D004491 ORTHO05D006742 3.3e-186 655.2 411 78.1
FAN24G0196 Fragaria x ananassa HOM05D004491 ORTHO05D006742 3.3e-186 655.2 411 78.3
Lalb_Chr25g0287571 Lupinus albus HOM05D004491 ORTHO05D006742 3.3e-186 655.2 414 77.1
CARHR173290 Cardamine hirsuta HOM05D004491 ORTHO05D006742 4.3e-186 654.8 410 78.3
MD03G1274300 Malus domestica HOM05D004491 ORTHO05D006742 4.3e-186 654.8 412 77.9
CANSAT25G3440 Cannabis sativa HOM05D004491 ORTHO05D006742 5.6e-186 654.4 411 78.6
Ca_09104_v3 Cicer arietinum L. HOM05D004491 ORTHO05D006742 7.3e-186 654.1 413 79.2
Gorai.004G139800 Gossypium raimondii HOM05D004491 ORTHO05D006742 7.3e-186 654.1 411 78.1
Sp5g00520 Schrenkiella parvula HOM05D004491 ORTHO05D006742 9.6e-186 653.7 411 77.6
Lj1g0004162 Lotus japonicus HOM05D004491 ORTHO05D006742 1.3e-185 653.3 413 78.7
Gohir.D08G136600 Gossypium hirsutum HOM05D004491 ORTHO05D006742 1.6e-185 652.9 411 78.1
FAN15G2832 Fragaria x ananassa HOM05D004491 ORTHO05D006742 2.1e-185 652.5 411 77.9
FAN27G1423 Fragaria x ananassa HOM05D004491 ORTHO05D006742 2.1e-185 652.5 411 77.9
Thhalv10001466m.g Eutrema salsugineum HOM05D004491 ORTHO05D006742 2.8e-185 652.1 411 77.1
Lalb_Chr20g0111001 Lupinus albus HOM05D004491 ORTHO05D006742 2.8e-185 652.1 415 76.6
PGSC0003DMG400024040 Solanum tuberosum HOM05D004491 ORTHO05D006742 2.8e-185 652.1 411 77.9
Aa31LG10G16820 Aethionema arabicum HOM05D004491 ORTHO05D006742 3.6e-185 651.7 411 77.6
Duzib211G0578 Durio zibethinus HOM05D004491 ORTHO05D006742 3.6e-185 651.7 411 77.6
SalBow3G0026 Salvia bowleyana HOM05D004491 ORTHO05D006742 3.6e-185 651.7 411 77.9
Gohir.A08G115800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 4.8e-185 651.4 411 77.9
Hma1.2p1_0209F.1_g089210 Hydrangea macrophylla HOM05D004491 ORTHO05D006742 8.1e-185 650.6 411 77.4
arahy.Tifrunner.gnm1.ann1.16527J Arachis hypogaea HOM05D004491 ORTHO05D006742 1.4e-184 649.8 414 78.5
MD11G1296800 Malus domestica HOM05D004491 ORTHO05D006742 1.8e-184 649.4 412 77.4
MSTRG.27268 Avicennia marina HOM05D004491 ORTHO05D006742 2.4e-184 649.0 411 78.1
arahy.Tifrunner.gnm1.ann1.5A22SW Arachis hypogaea HOM05D004491 ORTHO05D006742 6.9e-184 647.5 414 78.0
Nitab4.5_0003831g0010 Nicotiana tabacum HOM05D004491 ORTHO05D006742 6.9e-184 647.5 413 77.2
Sed0005784 Sechium edule HOM05D004491 ORTHO05D006742 1.5e-183 646.4 411 77.4
Sopen06g035830 Solanum pennellii HOM05D004491 ORTHO05D006742 1.5e-183 646.4 411 76.9
Actinidia24287 Actinidia chinensis HOM05D004491 ORTHO05D006742 2.0e-183 646.0 411 76.6
Peaxi162Scf01039g00225 Petunia axillaris HOM05D004491 ORTHO05D006742 3.4e-183 645.2 412 78.2
Solyc06g084440.3 Solanum lycopersicum HOM05D004491 ORTHO05D006742 4.5e-183 644.8 411 76.9
AT2G47970 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 5.8e-183 644.4 411 76.6
Psat3g025480 Pisum sativum HOM05D004491 ORTHO05D006742 1.3e-182 643.3 413 78.0
Sp4g29890 Schrenkiella parvula HOM05D004491 ORTHO05D006742 6.4e-182 641.0 411 76.4
Nitab4.5_0002093g0130 Nicotiana tabacum HOM05D004491 ORTHO05D006742 8.4e-182 640.6 413 76.5
TAR636G1438 Trochodendron aralioides HOM05D004491 ORTHO05D006742 8.4e-182 640.6 411 76.2
Gohir.A12G007800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 1.1e-181 640.2 411 75.9
Gohir.D12G007200 Gossypium hirsutum HOM05D004491 ORTHO05D006742 7.1e-181 637.5 411 75.9
Gorai.008G007400 Gossypium raimondii HOM05D004491 ORTHO05D006742 9.3e-181 637.1 411 75.7
vmacro09158 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 9.3e-181 637.1 413 76.3
Eucgr.K03426 Eucalyptus grandis HOM05D004491 ORTHO05D006742 3.5e-180 635.2 411 76.6
AL4G47560 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 6.0e-180 634.4 411 75.2
HanXRQChr11g0334841 Helianthus annuus HOM05D004491 ORTHO05D006742 7.9e-180 634.0 411 74.0
Aqoxy5G00601 Aquilegia oxysepala HOM05D004491 ORTHO05D006742 1.3e-179 633.3 411 74.5
Rhsim13G0018200 Rhododendron simsii HOM05D004491 ORTHO05D006742 3.9e-179 631.7 413 76.5
Lsat_1_v5_gn_5_189841 Lactuca sativa HOM05D004491 ORTHO05D006742 1.5e-178 629.8 411 73.5
PSO170G1317 Papaver somniferum HOM05D004491 ORTHO05D006742 2.5e-178 629.0 412 73.3
Nn3g21241 Nelumbo nucifera HOM05D004491 ORTHO05D006742 4.3e-178 628.2 412 76.2
DCAR_012436 Daucus carota HOM05D004491 ORTHO05D006742 7.4e-178 627.5 413 74.3
PGR044G0382 Punica granatum HOM05D004491 ORTHO05D006742 7.4e-178 627.5 412 75.7
Migut.F00598 Erythranthe guttata HOM05D004491 ORTHO05D006742 2.1e-177 625.9 411 74.7
MSTRG.8371 Avicennia marina HOM05D004491 ORTHO05D006742 6.2e-177 624.4 411 74.7
PSO407G0423 Papaver somniferum HOM05D004491 ORTHO05D006742 5.3e-176 621.3 412 72.6
SGA_v2.0_scaffold60G20898 Striga asiatica HOM05D004491 ORTHO05D006742 9.0e-176 620.5 444 71.4
ECA248G1403 Erigeron canadensis HOM05D004491 ORTHO05D006742 1.5e-175 619.8 410 72.9
SGA_v2.0_scaffold44G16642 Striga asiatica HOM05D004491 ORTHO05D006742 2.0e-175 619.4 412 74.8
Hund18024 Selenicereus undatus HOM05D004491 ORTHO05D006742 3.4e-175 618.6 416 74.0
Ah.02g115120 Amaranthus hybridus HOM05D004491 ORTHO05D006742 6.5e-174 614.4 417 72.9
ATR0706G070 Amborella trichopoda HOM05D004491 ORTHO05D006742 6.5e-174 614.4 411 74.0
TPR.G32310 Trifolium pratense HOM05D004491 ORTHO05D006742 1.3e-171 606.7 402 76.4
CSS0045203 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 3.0e-171 605.5 411 72.0
vmacro09175 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 5.1e-171 604.7 478 66.1
unitig_37.g12470 Utricularia gibba HOM05D004491 ORTHO05D006742 1.9e-170 602.8 412 74.0
CDE01G0135 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 3.3e-170 602.1 411 72.3
AUR62043003 Chenopodium quinoa HOM05D004491 ORTHO05D006742 7.4e-170 600.9 417 71.9
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 1.2e-167 593.6 376 76.9
Oeu022805.1 Olea europaea HOM05D004491 ORTHO05D006742 1.2e-167 593.6 456 66.0
CDE12G0180 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 1.5e-167 593.2 411 70.6
TAR365G0641 Trochodendron aralioides HOM05D004491 ORTHO05D006742 2.9e-166 589.0 411 70.8
SEGI_03905 Sequoiadendron giganteum HOM05D004491 ORTHO05D006742 1.4e-165 586.6 412 69.7
MBI19_g09851_MAGBIO Magnolia biondii HOM05D004491 ORTHO05D006742 1.9e-165 586.3 418 71.1
EL10Ac5g11643 Beta vulgaris HOM05D004491 ORTHO05D006742 6.1e-164 581.3 466 64.6
Lj1C40T6 Lonicera japonica HOM05D004491 ORTHO05D006742 7.4e-162 574.3 507 60.0
SHI15482 Sapria himalayana HOM05D004491 ORTHO05D006742 1.8e-160 569.7 430 67.7
COL.COLO4_08043 Corchorus olitorius HOM05D004491 ORTHO05D006742 3.8e-158 562.0 348 78.7
HPP92_001332 Vanilla planifolia HOM05D004491 ORTHO05D006742 8.2e-153 544.3 414 66.4
Mapoly0023s0134 Marchantia polymorpha HOM05D004491 ORTHO05D006742 1.2e-148 530.4 413 63.4
Duzib133G1404 Durio zibethinus HOM05D004491 ORTHO05D006742 3.0e-147 525.8 329 77.2
Pp3c4_25410 Physcomitrium patens HOM05D004491 ORTHO05D006742 1.2e-140 503.8 413 61.0
AagrBONN_evm.TU.Sc2ySwM_228.2306 Anthoceros agrestis HOM05D004491 ORTHO05D006742 8.0e-140 501.1 412 60.2
Sc05g0004670 Simmondsia chinensis HOM05D004491 ORTHO05D006742 1.8e-139 500.0 332 75.3
CAN.G1209.44 Capsicum annuum HOM05D004491 ORTHO05D006742 2.2e-137 493.0 304 78.6
CSS0029376 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 5.9e-135 485.0 347 70.0
SMO011G0024 Selaginella moellendorffii HOM05D004491 ORTHO05D006742 2.5e-133 479.6 411 60.3
Os01g0377700 Oryza sativa ssp. japonica HOM05D004491 ORTHO05D006742 2.3e-131 473.0 419 60.1
AUR62034024 Chenopodium quinoa HOM05D004491 ORTHO05D006742 1.7e-129 466.8 334 70.4
Zm00001eb366640 Zea mays HOM05D004491 ORTHO05D006742 9.1e-128 461.1 418 59.1
Zm00001eb146560 Zea mays HOM05D004491 ORTHO05D006742 1.3e-126 457.2 418 58.6
THA.LOC104820469 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 1.2e-116 424.1 238 87.4
PSO384G1012 Papaver somniferum HOM05D004491 ORTHO05D006742 1.9e-101 373.6 241 74.7
PRCOL_00001630 Prasinoderma coloniale HOM05D004491 ORTHO05D006742 4.9e-89 332.4 432 45.4
THA.LOC104799698 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 2.9e-81 306.6 179 82.1
MCO03G089 Micromonas commoda HOM05D004491 ORTHO05D006742 7.6e-74 282.0 390 42.8
Duzib147G1201 Durio zibethinus HOM05D004491 ORTHO05D006742 1.4e-72 277.7 236 62.3
Cre06.g293051 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D001132 1.5e-61 241.1 329 41.9
Aa31sc35G70 Aethionema arabicum HOM05D004491 ORTHO05D006742 9.3e-56 221.9 182 63.7
GSVIVG01011019001 Vitis vinifera HOM05D004491 ORTHO05D006742 7.9e-47 192.2 113 83.2
Actinidia00704 Actinidia chinensis HOM05D004491 ORTHO05D019493 4.5e-42 176.4 240 46.7
BcaB02g07304 Brassica carinata HOM05D004491 ORTHO05D091651 7.2e-40 169.1 220 45.0
Zm00001eb098320 Zea mays HOM05D004491 ORTHO05D006742 6.1e-39 166.0 152 53.9
AUR62034023 Chenopodium quinoa HOM05D004491 ORTHO05D019493 5.2e-30 136.3 86 74.4
Sopen08g018880 Solanum pennellii HOM05D004491 ORTHO05D006742 2.6e-29 134.0 79 77.2
BcaC08g45254 Brassica carinata HOM05D004491 ORTHO05D032214 3.1e-27 127.1 74 78.4
BolC6t38019H Brassica oleracea HOM05D004491 ORTHO05D032214 3.1e-27 127.1 74 78.4
C06p28510 Brassica napus HOM05D004491 ORTHO05D032214 5.9e-26 122.9 74 75.7
Gohir.A11G248600 Gossypium hirsutum HOM05D004491 ORTHO05D019493 1.1e-24 118.6 88 64.8
Gohir.A04G054626 Gossypium hirsutum HOM05D004491 ORTHO05D019493 4.2e-24 116.7 86 66.3
SEGI_06416 Sequoiadendron giganteum HOM05D004491 ORTHO05D019493 1.2e-23 115.2 84 58.3
C08p37710 Brassica napus HOM05D004491 ORTHO05D031847 3.6e-23 113.6 88 64.8
BolC8t51354H Brassica oleracea HOM05D004491 ORTHO05D031847 3.6e-23 113.6 88 64.8
BcaC07g40782 Brassica carinata HOM05D004491 ORTHO05D031847 4.4e-21 106.7 88 63.6
Actinidia28542 Actinidia chinensis HOM05D004491 ORTHO05D057841 8.2e-20 102.4 182 41.2
SHI00898 Sapria himalayana HOM05D004491 ORTHO05D019493 2.4e-19 100.9 73 65.8
BcaC07g42722 Brassica carinata HOM05D004491 ORTHO05D095981 4.1e-19 100.1 66 68.2
HPP92_013688 Vanilla planifolia HOM05D004491 ORTHO05D006742 2.7e-18 97.4 81 58.0
BcaC07g42719 Brassica carinata HOM05D004491 ORTHO05D094938 1.6e-15 88.2 66 63.6
SHI19086 Sapria himalayana HOM05D004491 ORTHO05D019493 8.0e-15 85.9 59 71.2
BolC6t38020H Brassica oleracea HOM05D004491 ORTHO05D040597 2.2e-12 77.8 113 42.5
C06p28520 Brassica napus HOM05D004491 ORTHO05D040597 2.8e-12 77.4 113 41.6
CAN.G1682.2 Capsicum annuum HOM05D011687 ORTHO05D014163 1.6e-10 71.6 88 46.6
Cfa022542 Carpinus fangiana HOM05D004491 ORTHO05D122449 9.5e-08 62.4 337 27.0
A09p54850 Brassica napus HOM05D004491 ORTHO05D102086 3.6e-07 60.5 127 34.6


User provided reference genes

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