Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc85.17 Carica papaya HOM05D004807 ORTHO05D005915 2.5e-178 628.6 312 100.0
Atru.chr8.1221 Acer truncatum HOM05D004807 ORTHO05D005915 3.4e-111 405.6 392 57.4
Ciclev10011020m.g Citrus clementina HOM05D004807 ORTHO05D005915 1.1e-104 384.0 390 55.1
Thecc.05G180400 Theobroma cacao HOM05D004807 ORTHO05D005915 3.2e-101 372.5 390 53.3
TWI74G1245 Tripterygium wilfordii HOM05D004807 ORTHO05D005915 1.6e-100 370.2 382 56.0
Manes.08G040000 Manihot esculenta HOM05D004807 ORTHO05D005915 1.4e-99 367.1 384 53.9
CiPaw.09G026200 Carya illinoinensis HOM05D004807 ORTHO05D005915 2.6e-98 362.8 388 53.9
COL.COLO4_29436 Corchorus olitorius HOM05D004807 ORTHO05D005915 4.8e-97 358.6 392 52.6
Gohir.A09G130500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 4.5e-95 352.1 390 51.8
Gohir.D09G126500 Gossypium hirsutum HOM05D004807 ORTHO05D005915 5.0e-94 348.6 390 51.8
Gorai.006G145300 Gossypium raimondii HOM05D004807 ORTHO05D005915 1.5e-93 347.1 390 51.8
CsaV3_3G038490 Cucumis sativus L. HOM05D004807 ORTHO05D005915 2.5e-93 346.3 387 51.9
CANSAT64G1965 Cannabis sativa HOM05D004807 ORTHO05D005915 3.6e-92 342.4 384 52.9
Potri.006G197200 Populus trichocarpa HOM05D004807 ORTHO05D005915 3.6e-92 342.4 391 51.4
ClCG10G017810 Citrullus lanatus HOM05D004807 ORTHO05D005915 4.7e-92 342.0 387 51.7
Cfa020114 Carpinus fangiana HOM05D004807 ORTHO05D005915 5.2e-91 338.6 385 51.4
GSVIVG01033428001 Vitis vinifera HOM05D004807 ORTHO05D005915 1.5e-90 337.0 392 50.0
Sed0007842 Sechium edule HOM05D004807 ORTHO05D005915 7.5e-90 334.7 383 50.7
Sabra06G0151700 Salix brachista HOM05D004807 ORTHO05D005915 2.0e-87 326.6 409 47.4
VMungo1383G3705 Vigna mungo HOM05D004807 ORTHO05D005915 1.3e-86 323.9 386 48.4
MD14G1049600 Malus domestica HOM05D004807 ORTHO05D005915 4.7e-84 315.5 388 48.2
arahy.Tifrunner.gnm1.ann1.4PIV4R Arachis hypogaea HOM05D004807 ORTHO05D005915 8.0e-84 314.7 388 47.9
Lj1A1135G80 Lonicera japonica HOM05D004807 ORTHO05D005915 8.0e-84 314.7 389 47.6
arahy.Tifrunner.gnm1.ann1.14IR3Z Arachis hypogaea HOM05D004807 ORTHO05D005915 1.4e-83 313.9 388 47.9
QL07p025555 Quercus lobata HOM05D004807 ORTHO05D005915 2.3e-83 313.2 466 41.8
Prupe.7G085900 Prunus persica HOM05D004807 ORTHO05D005915 4.0e-83 312.4 389 48.1
Phvul.001G200200 Phaseolus vulgaris HOM05D004807 ORTHO05D005915 5.2e-83 312.0 386 47.9
Medtr7g107350 Medicago truncatula HOM05D004807 ORTHO05D005915 5.7e-82 308.5 385 46.5
Glyma.03G206600 Glycine max HOM05D004807 ORTHO05D005915 2.8e-81 306.2 387 47.0
Psat0s2035g0040 Pisum sativum HOM05D004807 ORTHO05D005915 2.8e-81 306.2 387 46.8
RcHm_v2.0_Chr3g0478641 Rosa chinensis HOM05D004807 ORTHO05D005915 6.3e-81 305.1 390 47.7
Ca_09097_v3 Cicer arietinum L. HOM05D004807 ORTHO05D005915 3.1e-80 302.8 383 46.7
FvH4_6g21460 Fragaria vesca HOM05D004807 ORTHO05D005915 1.2e-79 300.8 389 46.8
FAN05G3467 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.2e-79 300.8 389 46.8
FAN14G4845 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.2e-79 300.8 389 46.8
Glyma.19G204200 Glycine max HOM05D004807 ORTHO05D005915 2.0e-79 300.1 387 46.5
Lalb_Chr25g0287671 Lupinus albus HOM05D004807 ORTHO05D005915 2.7e-79 299.7 397 45.8
Rhsim03G0002200 Rhododendron simsii HOM05D004807 ORTHO05D005915 2.7e-79 299.7 398 47.5
TAR623G0137 Trochodendron aralioides HOM05D004807 ORTHO05D005915 2.7e-79 299.7 392 46.4
FAN02G2347 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.3e-78 296.6 389 46.3
TPR.G32304 Trifolium pratense HOM05D004807 ORTHO05D005915 1.1e-77 294.3 385 46.2
Lsat_1_v5_gn_2_58060 Lactuca sativa HOM05D004807 ORTHO05D005915 1.5e-77 293.9 391 46.0
FAN09G2962 Fragaria x ananassa HOM05D004807 ORTHO05D005915 2.5e-77 293.1 389 45.5
Solyc10g080630.2 Solanum lycopersicum HOM05D004807 ORTHO05D005915 5.6e-77 292.0 389 46.0
THA.LOC104826780 Tarenaya hassleriana HOM05D004807 ORTHO05D005915 1.6e-76 290.4 389 45.8
PGR142G0165 Punica granatum HOM05D004807 ORTHO05D005915 2.1e-76 290.0 389 45.2
Sopen10g031170 Solanum pennellii HOM05D004807 ORTHO05D005915 2.1e-76 290.0 386 46.1
Peaxi162Scf00249g00811 Petunia axillaris HOM05D004807 ORTHO05D005915 8.0e-76 288.1 388 46.1
Lj1g0016427 Lotus japonicus HOM05D004807 ORTHO05D005915 6.8e-75 285.0 385 43.9
ECA238G3196 Erigeron canadensis HOM05D004807 ORTHO05D005915 1.5e-74 283.9 390 45.1
Aqoxy1G00442 Aquilegia oxysepala HOM05D004807 ORTHO05D005915 2.0e-74 283.5 394 44.9
Nitab4.5_0001079g0110 Nicotiana tabacum HOM05D004807 ORTHO05D005915 9.8e-74 281.2 374 47.1
BcaB06g25560 Brassica carinata HOM05D004807 ORTHO05D005915 2.2e-73 280.0 361 47.4
Thhalv10019900m.g Eutrema salsugineum HOM05D004807 ORTHO05D005915 3.7e-73 279.3 362 48.1
BcaC05g29309 Brassica carinata HOM05D004807 ORTHO05D005915 4.9e-73 278.9 360 48.1
Nitab4.5_0005684g0020 Nicotiana tabacum HOM05D004807 ORTHO05D005915 6.4e-73 278.5 374 46.8
A05p37420 Brassica napus HOM05D004807 ORTHO05D005915 4.1e-72 275.8 369 46.9
BolC5t34266H Brassica oleracea HOM05D004807 ORTHO05D005915 4.1e-72 275.8 368 47.0
BraA05t22540Z Brassica rapa HOM05D004807 ORTHO05D005915 4.1e-72 275.8 369 46.9
SalBow6G5976 Salvia bowleyana HOM05D004807 ORTHO05D005915 1.2e-71 274.2 388 43.8
C05p55980 Brassica napus HOM05D004807 ORTHO05D005915 4.6e-71 272.3 368 46.5
Sp3g10180 Schrenkiella parvula HOM05D004807 ORTHO05D005915 5.9e-71 271.9 361 46.5
CAN.G128.57 Capsicum annuum HOM05D004807 ORTHO05D005915 1.0e-70 271.2 387 45.0
Haze_20076 Corylus avellana HOM05D004807 ORTHO05D005915 1.0e-70 271.2 327 48.3
Carub.0003s1129 Capsella rubella HOM05D004807 ORTHO05D005915 1.3e-70 270.8 387 45.0
Actinidia22073 Actinidia chinensis HOM05D004807 ORTHO05D005915 1.7e-70 270.4 391 44.2
HanXRQChr14g0438891 Helianthus annuus HOM05D004807 ORTHO05D005915 2.3e-70 270.0 390 42.3
vmacro12557 Vaccinium macrocarpon HOM05D004807 ORTHO05D005915 3.0e-70 269.6 393 46.1
Migut.J01878 Erythranthe guttata HOM05D004807 ORTHO05D005915 1.1e-69 267.7 391 43.2
Oeu046734.3 Olea europaea HOM05D004807 ORTHO05D005915 7.3e-69 265.0 360 44.2
Rhsim03G0002400 Rhododendron simsii HOM05D004807 ORTHO05D005915 7.3e-69 265.0 346 48.6
AT3G11960 Arabidopsis thaliana HOM05D004807 ORTHO05D005915 1.2e-68 264.2 367 45.2
PSO528G0235 Papaver somniferum HOM05D004807 ORTHO05D005915 1.4e-67 260.8 389 43.7
SGA_v2.0_scaffold105G30514 Striga asiatica HOM05D004807 ORTHO05D005915 2.3e-67 260.0 393 43.3
BcaB04g18703 Brassica carinata HOM05D004807 ORTHO05D005915 5.2e-67 258.8 359 45.7
PSO170G3481 Papaver somniferum HOM05D004807 ORTHO05D005915 6.8e-67 258.5 389 43.2
BcaC01g04068 Brassica carinata HOM05D004807 ORTHO05D005915 3.4e-66 256.1 360 45.8
BraA03t12900Z Brassica rapa HOM05D004807 ORTHO05D005915 9.8e-66 254.6 378 43.9
EL10Ac3g06848 Beta vulgaris HOM05D004807 ORTHO05D005915 1.7e-65 253.8 413 40.2
Aa31LG3G5560 Aethionema arabicum HOM05D004807 ORTHO05D005915 2.2e-65 253.4 338 46.2
A03p37390 Brassica napus HOM05D004807 ORTHO05D005915 4.9e-65 252.3 370 44.6
Hund19221 Selenicereus undatus HOM05D004807 ORTHO05D005915 4.9e-65 252.3 409 41.6
BolC3t16806H Brassica oleracea HOM05D004807 ORTHO05D005915 6.4e-65 251.9 366 44.8
C03p45390 Brassica napus HOM05D004807 ORTHO05D005915 8.3e-65 251.5 366 44.5
Sc19g0006260 Simmondsia chinensis HOM05D004807 ORTHO05D005915 1.1e-64 251.1 390 42.1
FAN05G1427 Fragaria x ananassa HOM05D004807 ORTHO05D005915 3.2e-64 249.6 330 45.2
Nn7g35896 Nelumbo nucifera HOM05D004807 ORTHO05D005915 3.5e-63 246.1 340 43.8
Ah.04g153050 Amaranthus hybridus HOM05D004807 ORTHO05D005915 4.7e-60 235.7 405 39.5
ATR0665G460 Amborella trichopoda HOM05D004807 ORTHO05D005915 1.3e-57 227.6 379 39.6
Dinv25024 Davidia involucrata HOM05D004807 ORTHO05D005915 3.2e-56 223.0 221 57.9
DCAR_017047 Daucus carota HOM05D004807 ORTHO05D005915 3.5e-55 219.5 362 41.4
CsaV3_7G005530 Cucumis sativus L. HOM05D004807 ORTHO05D005915 1.3e-54 217.6 273 46.2
AUR62015288 Chenopodium quinoa HOM05D004807 ORTHO05D005915 3.1e-51 206.5 373 37.0
AUR62026870 Chenopodium quinoa HOM05D004807 ORTHO05D005915 1.3e-49 201.1 359 37.0
AUR62032732 Chenopodium quinoa HOM05D004807 ORTHO05D005915 9.2e-48 194.9 351 36.8
SHI30024 Sapria himalayana HOM05D004807 ORTHO05D005915 4.6e-47 192.6 305 38.0
unitig_0.g511 Utricularia gibba HOM05D004807 ORTHO05D005915 1.3e-46 191.0 254 45.7
Zm00001eb302880 Zea mays HOM05D004807 ORTHO05D005915 9.6e-45 184.9 372 36.3
CDE05G3662 Ceratophyllum demersum HOM05D004807 ORTHO05D005915 5.2e-43 179.1 370 34.6
Eucgr.K01882 Eucalyptus grandis HOM05D004807 ORTHO05D005915 3.4e-42 176.4 282 40.1
CSS0045552 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 2.4e-40 170.2 262 41.2
CSS0022615 Camellia sinensis var. sinensis HOM05D004807 ORTHO05D005915 2.1e-39 167.2 130 70.0
FAN14G5853 Fragaria x ananassa HOM05D004807 ORTHO05D005915 1.7e-38 164.1 297 40.1
Os07g0203700 Oryza sativa ssp. japonica HOM05D004807 ORTHO05D005915 1.7e-38 164.1 359 34.5
Pp3c24_19520 Physcomitrium patens HOM05D004807 ORTHO05D005915 2.5e-37 160.2 228 44.3
Psat7g139360 Pisum sativum HOM05D004807 ORTHO05D005915 5.6e-37 159.1 272 40.1
MSTRG.19928 Avicennia marina HOM05D004807 ORTHO05D005915 9.6e-37 158.3 281 36.3
AL3G23560 Arabidopsis lyrata HOM05D004807 ORTHO05D005915 1.3e-36 157.9 277 38.6
SEGI_25187 Sequoiadendron giganteum HOM05D004807 ORTHO05D005915 1.4e-32 144.4 339 33.6
AagrBONN_evm.TU.Sc2ySwM_228.688 Anthoceros agrestis HOM05D004807 ORTHO05D005915 3.2e-32 143.3 221 40.7
Mapoly0005s0200 Marchantia polymorpha HOM05D004807 ORTHO05D005915 2.1e-31 140.6 220 39.5
SMO276G0043 Selaginella moellendorffii HOM05D004807 ORTHO05D005915 4.3e-29 132.9 234 37.6
CARHR086510 Cardamine hirsuta HOM05D004807 ORTHO05D005915 8.4e-25 118.6 200 38.0
SHI30022 Sapria himalayana HOM05D004807 ORTHO05D005915 1.8e-22 110.9 125 50.4
MELO3C009593.2 Cucumis melo HOM05D004807 ORTHO05D005915 3.3e-21 106.7 88 60.2
EL10Ac4g10205 Beta vulgaris HOM05D000020 ORTHO05D027019 6.9e-19 99.0 71 66.2
Psat1g163960 Pisum sativum HOM05D004807 ORTHO05D005915 1.5e-13 81.3 70 50.0
CBR_g51523 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-13 80.5 201 31.3
Psat3g169960 Pisum sativum HOM05D002132 ORTHO05D009901 2.5e-13 80.5 199 31.2
CsaV3_7G005520 Cucumis sativus L. HOM05D004807 ORTHO05D005915 4.8e-12 76.3 79 59.5
Dinv25023 Davidia involucrata HOM05D004807 ORTHO05D005915 9.0e-11 72.0 74 52.7
SEGI_09849 Sequoiadendron giganteum HOM05D004807 ORTHO05D005915 3.9e-06 56.6 47 57.4


User provided reference genes

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