Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc80.15 Carica papaya HOM05D001613 ORTHO05D030852 1.3e-79 299.7 157 100.0
Thecc.07G100200 Theobroma cacao HOM05D001613 ORTHO05D001556 2.1e-24 116.3 131 52.7
QL08p023274 Quercus lobata HOM05D001613 ORTHO05D001556 6.5e-18 94.7 124 45.2
Potri.001G373300 Populus trichocarpa HOM05D001613 ORTHO05D001556 8.6e-18 94.4 137 46.0
Haze_09377 Corylus avellana HOM05D001613 ORTHO05D001556 4.2e-17 92.0 127 48.0
Ciclev10008640m.g Citrus clementina HOM05D001613 ORTHO05D001556 7.2e-17 91.3 122 47.5
CiPaw.11G166200 Carya illinoinensis HOM05D001613 ORTHO05D001556 3.6e-16 89.0 105 53.3
Manes.13G085400 Manihot esculenta HOM05D001613 ORTHO05D001556 2.3e-15 86.3 105 47.6
Gohir.D13G152290 Gossypium hirsutum HOM05D001613 ORTHO05D001556 5.2e-15 85.1 128 43.8
Prupe.4G172900 Prunus persica HOM05D001613 ORTHO05D001556 6.8e-15 84.7 127 44.9
Gohir.A13G147500 Gossypium hirsutum HOM05D001613 ORTHO05D001556 8.9e-15 84.3 128 44.5
Rhsim06G0203700 Rhododendron simsii HOM05D001613 ORTHO05D001556 4.4e-14 82.0 126 43.7
Potri.011G097500 Populus trichocarpa HOM05D001613 ORTHO05D001556 7.5e-14 81.3 76 53.9
Gorai.013G172000 Gossypium raimondii HOM05D001613 ORTHO05D001556 9.8e-14 80.9 128 42.2
FAN21G1640 Fragaria x ananassa HOM05D001613 ORTHO05D001556 1.7e-13 80.1 135 45.9
Medtr8g061040 Medicago truncatula HOM05D001613 ORTHO05D001556 1.7e-13 80.1 129 43.4
Sabra11G0090400 Salix brachista HOM05D001613 ORTHO05D001556 1.7e-13 80.1 76 51.3
Sabra11G0091600 Salix brachista HOM05D001613 ORTHO05D001556 1.7e-13 80.1 76 51.3
Lj3g0003713 Lotus japonicus HOM05D001613 ORTHO05D001556 2.2e-13 79.7 110 45.5
Psat2g083920 Pisum sativum HOM05D001613 ORTHO05D001556 2.2e-13 79.7 101 48.5
FAN25G2522 Fragaria x ananassa HOM05D001613 ORTHO05D001556 2.8e-13 79.3 134 44.0
Sabra16G0245700 Salix brachista HOM05D001613 ORTHO05D001556 3.7e-13 79.0 125 42.4
FvH4_3g19120 Fragaria vesca HOM05D001613 ORTHO05D001556 4.9e-13 78.6 134 44.0
FAN11G2345 Fragaria x ananassa HOM05D001613 ORTHO05D001556 4.9e-13 78.6 134 44.0
FAN16G1152 Fragaria x ananassa HOM05D001613 ORTHO05D001556 4.9e-13 78.6 134 44.0
TPR.G28171 Trifolium pratense HOM05D001613 ORTHO05D001556 6.3e-13 78.2 120 43.3
CiPaw.12G116600 Carya illinoinensis HOM05D001613 ORTHO05D001556 1.1e-12 77.4 60 65.0
Duzib213G0605 Durio zibethinus HOM05D001613 ORTHO05D001556 1.8e-12 76.6 128 42.2
vmacro09513 Vaccinium macrocarpon HOM05D001613 ORTHO05D001556 1.8e-12 76.6 135 37.0
Dinv20218 Davidia involucrata HOM05D001613 ORTHO05D001556 2.4e-12 76.3 132 41.7
Glyma.06G235200 Glycine max HOM05D001613 ORTHO05D001556 2.4e-12 76.3 113 41.6
TWI38G0128 Tripterygium wilfordii HOM05D001613 ORTHO05D001556 3.1e-12 75.9 99 47.5
vmacro11901 Vaccinium macrocarpon HOM05D001613 ORTHO05D001556 9.2e-12 74.3 127 38.6
arahy.Tifrunner.gnm1.ann1.5XLE41 Arachis hypogaea HOM05D001613 ORTHO05D001556 1.2e-11 73.9 121 42.1
GSVIVG01014258001 Vitis vinifera HOM05D001613 ORTHO05D001556 1.2e-11 73.9 128 42.2
Eucgr.F01181 Eucalyptus grandis HOM05D001613 ORTHO05D001556 1.6e-11 73.6 127 45.7
RcHm_v2.0_Chr5g0031921 Rosa chinensis HOM05D001613 ORTHO05D001556 1.6e-11 73.6 117 42.7
CSS0017563 Camellia sinensis var. sinensis HOM05D001613 ORTHO05D001556 2.7e-11 72.8 147 38.8
CSS0040689 Camellia sinensis var. sinensis HOM05D001613 ORTHO05D001556 2.7e-11 72.8 147 38.8
Lalb_Chr03g0030821 Lupinus albus HOM05D001613 ORTHO05D001556 3.5e-11 72.4 76 48.7
Actinidia35234 Actinidia chinensis HOM05D004118 ORTHO05D001556 4.5e-11 72.0 105 45.7
Lalb_Chr25g0286161 Lupinus albus HOM05D001613 ORTHO05D001556 4.5e-11 72.0 102 42.2
Hma1.2p1_0313F.1_g121610 Hydrangea macrophylla HOM05D001613 ORTHO05D001556 1.0e-10 70.9 126 42.1
Rhsim04G0023300 Rhododendron simsii HOM05D001613 ORTHO05D001556 1.3e-10 70.5 135 39.3
Dinv14951 Davidia involucrata HOM05D001613 ORTHO05D001556 2.3e-10 69.7 107 42.1
arahy.Tifrunner.gnm1.ann1.GD4ZSB Arachis hypogaea HOM05D001613 ORTHO05D001556 2.9e-10 69.3 122 41.8
TWI39G0917 Tripterygium wilfordii HOM05D001613 ORTHO05D001556 2.9e-10 69.3 128 41.4
Ca_24304_v3 Cicer arietinum L. HOM05D001613 ORTHO05D001556 3.8e-10 68.9 77 53.2
TAR629G0933 Trochodendron aralioides HOM05D001613 ORTHO05D001556 5.0e-10 68.6 104 43.3
Lj3g0020932 Lotus japonicus HOM05D001613 ORTHO05D001556 8.6e-10 67.8 54 59.3
CANSAT35G1755 Cannabis sativa HOM05D001613 ORTHO05D001556 1.1e-09 67.4 133 39.8
Glyma.12G158000 Glycine max HOM05D001613 ORTHO05D001556 1.1e-09 67.4 124 39.5
Psat4g169440 Pisum sativum HOM05D001613 ORTHO05D001556 1.5e-09 67.0 58 60.3
Sed0014113 Sechium edule HOM05D001613 ORTHO05D001556 2.5e-09 66.2 127 34.6
Lalb_Chr19g0134021 Lupinus albus HOM05D001613 ORTHO05D001556 4.3e-09 65.5 80 46.2
MD11G1257200 Malus domestica HOM05D001613 ORTHO05D001556 4.3e-09 65.5 124 38.7
Gorai.002G066000 Gossypium raimondii HOM05D001613 ORTHO05D001556 1.6e-08 63.5 91 46.2
TAR375G0357 Trochodendron aralioides HOM05D001613 ORTHO05D001556 1.6e-08 63.5 124 36.3
Gohir.D01G046500 Gossypium hirsutum HOM05D001613 ORTHO05D001556 2.1e-08 63.2 90 46.7
CsaV3_3G019600 Cucumis sativus L. HOM05D001613 ORTHO05D001556 3.6e-08 62.4 127 30.7
Phvul.011G158200 Phaseolus vulgaris HOM05D001613 ORTHO05D001556 3.6e-08 62.4 106 40.6
Nn1g09301 Nelumbo nucifera HOM05D001613 ORTHO05D001556 4.7e-08 62.0 127 36.2
DCAR_013130 Daucus carota HOM05D001613 ORTHO05D001556 1.0e-07 60.8 71 49.3
Gohir.A01G060000 Gossypium hirsutum HOM05D001613 ORTHO05D001556 1.0e-07 60.8 91 45.1
Oeu061323.1 Olea europaea HOM05D001613 ORTHO05D001556 1.0e-07 60.8 57 61.4
Cc05_g11560 Coffea canephora HOM05D001613 ORTHO05D001556 1.4e-07 60.5 61 59.0
MELO3C019390.2 Cucumis melo HOM05D001613 ORTHO05D001556 1.4e-07 60.5 133 30.1
Actinidia14385 Actinidia chinensis HOM05D001613 ORTHO05D001556 2.3e-07 59.7 35 74.3
VMungo1127G0489 Vigna mungo HOM05D001613 ORTHO05D001556 2.3e-07 59.7 81 48.1
Actinidia28186 Actinidia chinensis HOM05D001613 ORTHO05D030852 3.0e-07 59.3 58 56.9
DCAR_019583 Daucus carota HOM05D001613 ORTHO05D001556 3.0e-07 59.3 75 48.0
Ah.06g184900 Amaranthus hybridus HOM05D001613 ORTHO05D001556 4.0e-07 58.9 104 39.4
Ah.04g164450 Amaranthus hybridus HOM05D001613 ORTHO05D001556 5.2e-07 58.5 76 47.4
AUR62036134 Chenopodium quinoa HOM05D001613 ORTHO05D001556 5.2e-07 58.5 107 42.1
ClCG05G009190 Citrullus lanatus HOM05D001613 ORTHO05D001556 5.2e-07 58.5 57 52.6
DCAR_019581 Daucus carota HOM05D001613 ORTHO05D030852 5.2e-07 58.5 75 48.0
SalBow7G4060 Salvia bowleyana HOM05D001613 ORTHO05D001556 8.9e-07 57.8 58 51.7
Hund22809 Selenicereus undatus HOM05D001613 ORTHO05D001556 8.9e-07 57.8 69 46.4
EL10Ac4g08278 Beta vulgaris HOM05D001613 ORTHO05D001556 1.2e-06 57.4 51 56.9
Sed0003169 Sechium edule HOM05D001613 ORTHO05D001556 1.5e-06 57.0 129 35.7
HanXRQChr10g0302441 Helianthus annuus HOM05D001613 ORTHO05D001556 2.6e-06 56.2 74 45.9
AUR62019504 Chenopodium quinoa HOM05D001613 ORTHO05D001556 3.4e-06 55.8 108 38.0
THA.LOC104810452 Tarenaya hassleriana HOM05D001613 ORTHO05D001556 7.5e-06 54.7 84 40.5
AT3G18380 Arabidopsis thaliana HOM05D001613 ORTHO05D001556 9.8e-06 54.3 73 47.9


User provided reference genes

Program Settings