Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc776.5 Carica papaya HOM05D004501 ORTHO05D004944 2.3e-96 355.5 174 100.0
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 2.2e-59 232.6 157 73.2
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 8.5e-59 230.7 161 70.2
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 4.2e-58 228.4 157 70.7
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 5.5e-58 228.0 162 66.7
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 5.5e-58 228.0 148 73.6
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 5.5e-58 228.0 133 77.4
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 7.2e-58 227.6 163 69.9
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 1.2e-57 226.9 158 72.2
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 7.9e-57 224.2 157 71.3
TAR374G0010 Trochodendron aralioides HOM05D004501 ORTHO05D004944 7.9e-57 224.2 133 77.4
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 7.9e-57 224.2 158 70.9
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 1.4e-56 223.4 143 74.1
Dinv39174 Davidia involucrata HOM05D004501 ORTHO05D004944 1.4e-56 223.4 144 72.9
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 8.8e-56 220.7 133 76.7
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 1.5e-55 219.9 148 71.6
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 2.0e-55 219.5 148 70.3
CSS0028018 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 3.3e-55 218.8 148 69.6
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 5.7e-55 218.0 148 70.9
CSS0007149 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.3e-54 216.9 135 75.6
DCAR_020177 Daucus carota HOM05D004501 ORTHO05D004944 1.7e-54 216.5 135 73.3
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 3.7e-54 215.3 148 68.2
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 6.3e-54 214.5 148 70.9
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 1.8e-53 213.0 133 72.9
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 3.1e-53 212.2 165 64.8
Nn1g00910 Nelumbo nucifera HOM05D004501 ORTHO05D004944 6.9e-53 211.1 134 72.4
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 9.1e-53 210.7 133 73.7
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 9.1e-53 210.7 133 71.4
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 9.1e-53 210.7 132 73.5
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.2e-52 210.3 134 73.1
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 1.5e-52 209.9 136 71.3
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 1.5e-52 209.9 163 63.8
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 3.4e-52 208.8 132 75.0
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 5.9e-52 208.0 161 63.4
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 1.0e-51 207.2 148 65.5
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 2.9e-51 205.7 150 64.0
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 2.9e-51 205.7 170 60.6
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 2.9e-51 205.7 157 63.7
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 3.8e-51 205.3 134 71.6
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 3.8e-51 205.3 162 64.2
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 6.5e-51 204.5 131 71.0
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 1.1e-50 203.8 173 58.4
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 1.1e-50 203.8 133 69.9
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 1.1e-50 203.8 158 65.8
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 1.4e-50 203.4 148 68.9
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 1.4e-50 203.4 148 68.9
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 1.4e-50 203.4 150 67.3
Rhsim13G0032200 Rhododendron simsii HOM05D004501 ORTHO05D004944 1.4e-50 203.4 153 66.0
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 1.4e-50 203.4 148 63.5
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 1.4e-50 203.4 161 63.4
FAN04G2417 Fragaria x ananassa HOM05D004501 ORTHO05D004944 3.2e-50 202.2 133 71.4
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 3.2e-50 202.2 131 69.5
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 7.2e-50 201.1 149 65.1
Lsat_1_v5_gn_6_93441 Lactuca sativa HOM05D004501 ORTHO05D004944 9.4e-50 200.7 132 71.2
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 9.4e-50 200.7 133 70.7
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 9.4e-50 200.7 146 64.4
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 3.6e-49 198.7 160 63.8
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 8.0e-49 197.6 133 69.9
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 8.0e-49 197.6 133 69.9
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 8.0e-49 197.6 150 66.0
Zm00001eb056470 Zea mays HOM05D004501 ORTHO05D004944 8.0e-49 197.6 131 69.5
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 1.0e-48 197.2 155 64.5
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 1.4e-48 196.8 147 64.6
Os03g0737200 Oryza sativa ssp. japonica HOM05D004501 ORTHO05D004944 1.8e-48 196.4 131 69.5
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 1.8e-48 196.4 127 73.2
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 3.0e-48 195.7 153 64.1
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 3.9e-48 195.3 151 62.3
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 3.9e-48 195.3 158 60.8
ATR1145G029 Amborella trichopoda HOM05D004501 ORTHO05D004944 5.2e-48 194.9 155 63.2
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 5.2e-48 194.9 133 68.4
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 6.7e-48 194.5 160 59.4
SalBow6G6502 Salvia bowleyana HOM05D004501 ORTHO05D004944 8.8e-48 194.1 136 66.9
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 1.1e-47 193.7 151 62.3
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.1e-47 193.7 158 62.0
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 2.6e-47 192.6 131 71.8
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 4.4e-47 191.8 157 60.5
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 4.4e-47 191.8 148 62.2
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 5.7e-47 191.4 161 58.4
Migut.A01144 Erythranthe guttata HOM05D004501 ORTHO05D004944 7.4e-47 191.0 136 68.4
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 9.7e-47 190.7 133 66.2
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 1.7e-46 189.9 160 60.6
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 1.7e-46 189.9 151 60.3
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 1.7e-46 189.9 151 63.6
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 3.7e-46 188.7 133 66.2
MSTRG.12127 Avicennia marina HOM05D004501 ORTHO05D004944 6.3e-46 188.0 136 66.2
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 8.2e-46 187.6 135 68.1
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 8.2e-46 187.6 132 68.2
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 1.1e-45 187.2 128 68.8
CSS0011270 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 1.8e-45 186.4 133 67.7
MD06G1054400 Malus domestica HOM05D004501 ORTHO05D004944 1.8e-45 186.4 133 66.2
SHI29866 Sapria himalayana HOM05D004501 ORTHO05D004944 2.4e-45 186.0 132 62.9
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 5.3e-45 184.9 151 60.9
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 9.1e-45 184.1 146 61.0
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 1.2e-44 183.7 133 66.2
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 1.6e-44 183.3 160 59.4
Ah.12g054390 Amaranthus hybridus HOM05D004501 ORTHO05D004944 2.6e-44 182.6 131 63.4
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 7.7e-44 181.0 133 61.7
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 9.4e-42 174.1 132 62.9
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 6.1e-41 171.4 133 61.7
SEGI_38311 Sequoiadendron giganteum HOM05D004501 ORTHO05D004944 1.4e-40 170.2 137 56.9
Zm00001eb047720 Zea mays HOM05D004501 ORTHO05D004944 1.4e-40 170.2 114 67.5
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 4.0e-40 168.7 133 59.4
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 8.8e-40 167.5 133 59.4
SGA_v2.0_scaffold104G30193 Striga asiatica HOM05D004501 ORTHO05D004944 8.8e-40 167.5 146 56.8
Mapoly0088s0017 Marchantia polymorpha HOM05D004501 ORTHO05D004944 2.6e-39 166.0 132 57.6
CDE02G3094 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 1.3e-38 163.7 141 56.7
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 4.1e-37 158.7 134 59.7
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 4.1e-37 158.7 134 59.7
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 7.0e-37 157.9 134 59.0
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 1.6e-36 156.8 158 53.2
CDE11G0214 Ceratophyllum demersum HOM05D004501 ORTHO05D004944 1.6e-36 156.8 131 58.0
unitig_0.g1052 Utricularia gibba HOM05D004501 ORTHO05D004944 2.9e-35 152.5 132 55.3
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 8.5e-35 151.0 94 72.3
SMO356G0217 Selaginella moellendorffii HOM05D004501 ORTHO05D004944 8.5e-35 151.0 133 51.1
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 1.9e-34 149.8 144 53.5
Pp3c24_4970 Physcomitrium patens HOM05D004501 ORTHO05D004944 8.8e-32 141.0 144 52.8
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 1.7e-30 136.7 109 59.6
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 1.3e-27 127.1 107 60.7
Pp3c10_5410 Physcomitrium patens HOM05D004501 ORTHO05D004944 1.7e-27 126.7 136 49.3
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 5.0e-27 125.2 151 46.4
C04p07690 Brassica napus HOM05D004501 ORTHO05D004944 8.6e-27 124.4 104 58.7
CBR_g20363 Chara braunii HOM05D004501 ORTHO05D004944 5.5e-26 121.7 146 43.8
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 1.8e-24 116.7 115 49.6
GSVIVG01006616001 Vitis vinifera HOM05D004501 ORTHO05D004944 7.8e-20 101.3 69 66.7
BolC4t22386H Brassica oleracea HOM05D004501 ORTHO05D004944 2.5e-18 96.3 97 49.5
HPP92_002600 Vanilla planifolia HOM05D004501 ORTHO05D004944 6.1e-17 91.7 74 62.2
Zm00001eb142020 Zea mays HOM05D004501 ORTHO05D004944 2.2e-14 83.2 68 55.9
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 4.0e-08 62.4 35 82.9


User provided reference genes

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