Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc776.3 Carica papaya HOM05D004501 ORTHO05D004944 4.6e-158 561.2 292 100.0
GSVIVG01005813001 Vitis vinifera HOM05D004501 ORTHO05D004944 1.7e-48 197.2 301 44.5
Thecc.03G247200 Theobroma cacao HOM05D004501 ORTHO05D004944 2.8e-46 189.9 299 44.5
Duzib205G0832 Durio zibethinus HOM05D004501 ORTHO05D004944 1.2e-44 184.5 297 44.1
Gorai.008G233400 Gossypium raimondii HOM05D004501 ORTHO05D004944 3.2e-42 176.4 294 43.2
Gohir.D12G217800 Gossypium hirsutum HOM05D004501 ORTHO05D004944 7.1e-42 175.3 294 42.9
Duzib068G0690 Durio zibethinus HOM05D004501 ORTHO05D004944 2.7e-41 173.3 293 42.0
Gohir.A12G215200 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.7e-40 170.6 294 42.5
Cfa012694 Carpinus fangiana HOM05D004501 ORTHO05D004944 4.3e-39 166.0 299 42.1
COL.COLO4_37109 Corchorus olitorius HOM05D004501 ORTHO05D004944 7.3e-39 165.2 273 43.6
Gohir.A03G006500 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.4e-37 161.0 302 42.4
Haze_07939 Corylus avellana HOM05D004501 ORTHO05D004944 9.0e-37 158.3 299 42.1
TAR374G0951 Trochodendron aralioides HOM05D004501 ORTHO05D004944 1.2e-36 157.9 315 38.1
Gorai.003G175400 Gossypium raimondii HOM05D004501 ORTHO05D004944 1.1e-34 151.4 302 40.7
Gohir.D03G165700 Gossypium hirsutum HOM05D004501 ORTHO05D004944 1.9e-34 150.6 302 41.1
Atru.chr9.1263 Acer truncatum HOM05D004501 ORTHO05D004944 5.4e-34 149.1 311 40.8
TWI15G0617 Tripterygium wilfordii HOM05D004501 ORTHO05D004944 1.3e-32 144.4 297 36.0
Prupe.5G064600 Prunus persica HOM05D004501 ORTHO05D004944 8.7e-32 141.7 304 36.5
MD06G1054200 Malus domestica HOM05D004501 ORTHO05D004944 1.1e-31 141.4 302 37.1
Ciclev10018712m.g Citrus clementina HOM05D004501 ORTHO05D004944 1.9e-31 140.6 303 39.9
MD04G1060900 Malus domestica HOM05D004501 ORTHO05D004944 2.1e-30 137.1 302 36.4
CANSAT21G1630 Cannabis sativa HOM05D004501 ORTHO05D004944 1.4e-29 134.4 300 35.3
Dinv21665 Davidia involucrata HOM05D004501 ORTHO05D004944 1.8e-29 134.0 260 40.8
QL12p011237 Quercus lobata HOM05D004501 ORTHO05D004944 1.8e-29 134.0 301 38.9
Potri.003G079700 Populus trichocarpa HOM05D004501 ORTHO05D004944 6.9e-29 132.1 303 34.3
Manes.01G084200 Manihot esculenta HOM05D004501 ORTHO05D004944 4.5e-28 129.4 302 36.4
RcHm_v2.0_Chr7g0204151 Rosa chinensis HOM05D004501 ORTHO05D004944 5.8e-28 129.0 304 34.5
Sabra03G0049600 Salix brachista HOM05D004501 ORTHO05D004944 2.2e-27 127.1 302 33.8
FvH4_5g19540 Fragaria vesca HOM05D004501 ORTHO05D004944 2.9e-27 126.7 304 34.5
FAN18G4013 Fragaria x ananassa HOM05D004501 ORTHO05D004944 2.9e-27 126.7 304 34.5
Potri.001G155200 Populus trichocarpa HOM05D004501 ORTHO05D004944 1.1e-26 124.8 304 34.5
FAN08G1352 Fragaria x ananassa HOM05D004501 ORTHO05D004944 3.2e-26 123.2 304 33.9
FAN13G2915 Fragaria x ananassa HOM05D004501 ORTHO05D004944 9.3e-26 121.7 303 33.7
CiPaw.12G049700 Carya illinoinensis HOM05D004501 ORTHO05D004944 2.3e-24 117.1 302 36.1
Eucgr.E00402 Eucalyptus grandis HOM05D004501 ORTHO05D004944 3.3e-23 113.2 302 36.1
Carub.0004s2192 Capsella rubella HOM05D004501 ORTHO05D004944 5.6e-23 112.5 299 36.1
THA.LOC104810067 Tarenaya hassleriana HOM05D004501 ORTHO05D004944 7.4e-23 112.1 302 34.4
Aa31LG5G19800 Aethionema arabicum HOM05D004501 ORTHO05D004944 9.6e-23 111.7 300 36.3
Sabra01G0124800 Salix brachista HOM05D004501 ORTHO05D004944 2.1e-22 110.5 331 30.5
CiPaw.11G082400 Carya illinoinensis HOM05D004501 ORTHO05D004944 4.8e-22 109.4 300 38.7
Rhsim07G0115200 Rhododendron simsii HOM05D004501 ORTHO05D004944 4.8e-22 109.4 300 33.3
Ca_24594_v3 Cicer arietinum L. HOM05D004501 ORTHO05D004944 1.1e-21 108.2 303 35.6
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea HOM05D004501 ORTHO05D004944 1.4e-21 107.8 303 34.3
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea HOM05D004501 ORTHO05D004944 1.4e-21 107.8 303 34.3
AL4G37360 Arabidopsis lyrata HOM05D004501 ORTHO05D004944 1.8e-21 107.5 300 33.7
CARHR134700 Cardamine hirsuta HOM05D004501 ORTHO05D004944 3.1e-21 106.7 303 35.6
AT2G39810 Arabidopsis thaliana HOM05D004501 ORTHO05D004944 4.0e-21 106.3 299 35.8
DCAR_020178 Daucus carota HOM05D004501 ORTHO05D004944 5.3e-21 105.9 274 34.3
vmacro14139 Vaccinium macrocarpon HOM05D004501 ORTHO05D004944 6.9e-21 105.5 301 33.2
Medtr5g012940 Medicago truncatula HOM05D004501 ORTHO05D004944 9.0e-21 105.1 303 32.7
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla HOM05D004501 ORTHO05D004944 1.5e-20 104.4 301 31.2
CSS0040587 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 2.0e-20 104.0 290 34.5
Lj2C224T11 Lonicera japonica HOM05D004501 ORTHO05D004944 2.6e-20 103.6 308 34.4
Actinidia02160 Actinidia chinensis HOM05D004501 ORTHO05D004944 3.4e-20 103.2 298 31.9
Glyma.11G035800 Glycine max HOM05D004501 ORTHO05D004944 4.5e-20 102.8 303 34.0
Psat2g176440 Pisum sativum HOM05D004501 ORTHO05D004944 5.8e-20 102.4 302 34.1
Nitab4.5_0010602g0010 Nicotiana tabacum HOM05D004501 ORTHO05D004944 7.6e-20 102.1 298 32.9
PGR042G0255 Punica granatum HOM05D004501 ORTHO05D004944 1.0e-19 101.7 305 32.1
Hund14524 Selenicereus undatus HOM05D004501 ORTHO05D004944 2.9e-19 100.1 306 33.7
VMungo1215G1578 Vigna mungo HOM05D004501 ORTHO05D004944 4.9e-19 99.4 298 33.2
MELO3C005513.2 Cucumis melo HOM05D004501 ORTHO05D004944 6.5e-19 99.0 298 32.2
Phvul.002G056400 Phaseolus vulgaris HOM05D004501 ORTHO05D004944 2.5e-18 97.1 297 32.7
Lalb_Chr16g0379471 Lupinus albus HOM05D004501 ORTHO05D004944 4.2e-18 96.3 301 31.9
Thhalv10016197m.g Eutrema salsugineum HOM05D004501 ORTHO05D004944 7.1e-18 95.5 312 34.3
Lj2g0006235 Lotus japonicus HOM05D004501 ORTHO05D004944 7.1e-18 95.5 300 31.3
Oeu027013.1 Olea europaea HOM05D004501 ORTHO05D004944 9.3e-18 95.1 295 33.2
Glyma.01G207400 Glycine max HOM05D004501 ORTHO05D004944 1.2e-17 94.7 302 32.1
TPR.G18132 Trifolium pratense HOM05D004501 ORTHO05D004944 1.2e-17 94.7 271 32.1
ClCG01G004260 Citrullus lanatus HOM05D004501 ORTHO05D004944 1.6e-17 94.4 300 31.0
Sp4g22100 Schrenkiella parvula HOM05D004501 ORTHO05D004944 2.1e-17 94.0 301 33.2
Peaxi162Scf00346g00112 Petunia axillaris HOM05D004501 ORTHO05D004944 1.0e-16 91.7 301 31.2
Lalb_Chr09g0324311 Lupinus albus HOM05D004501 ORTHO05D004944 1.8e-16 90.9 292 31.5
CsaV3_5G004460 Cucumis sativus L. HOM05D004501 ORTHO05D004944 3.0e-16 90.1 300 32.0
CSS0032615 Camellia sinensis var. sinensis HOM05D004501 ORTHO05D004944 8.7e-16 88.6 309 32.0
PGSC0003DMG400026239 Solanum tuberosum HOM05D004501 ORTHO05D004944 8.7e-16 88.6 300 31.7
Aqoxy7G03746 Aquilegia oxysepala HOM05D004501 ORTHO05D004944 1.5e-15 87.8 308 30.8
A04p30230 Brassica napus HOM05D004501 ORTHO05D004944 2.5e-15 87.0 298 33.2
PSO675G3024 Papaver somniferum HOM05D004501 ORTHO05D004944 3.3e-15 86.7 321 31.5
EL10Ac5g12334 Beta vulgaris HOM05D004501 ORTHO05D004944 4.3e-15 86.3 308 32.1
AUR62019990 Chenopodium quinoa HOM05D004501 ORTHO05D004944 5.7e-15 85.9 312 30.8
Cc08_g12070 Coffea canephora HOM05D004501 ORTHO05D004944 7.4e-15 85.5 298 30.2
BraA04t18485Z Brassica rapa HOM05D004501 ORTHO05D004944 9.7e-15 85.1 302 32.8
Sed0003847 Sechium edule HOM05D004501 ORTHO05D004944 1.3e-14 84.7 296 31.1
Sed0022861 Sechium edule HOM05D004501 ORTHO05D004944 1.6e-14 84.3 303 32.7
BolC4t28262H Brassica oleracea HOM05D004501 ORTHO05D004944 2.1e-14 84.0 297 31.3
AUR62007118 Chenopodium quinoa HOM05D004501 ORTHO05D004944 3.7e-14 83.2 286 32.5
Nitab4.5_0001590g0040 Nicotiana tabacum HOM05D004501 ORTHO05D004944 4.8e-14 82.8 295 28.8
C04p67630 Brassica napus HOM05D004501 ORTHO05D004944 6.3e-14 82.4 297 31.0
Actinidia14399 Actinidia chinensis HOM05D004501 ORTHO05D004944 8.2e-14 82.0 296 31.1
CAN.G1178.8 Capsicum annuum HOM05D004501 ORTHO05D004944 8.2e-14 82.0 300 31.7
Sopen08g026820 Solanum pennellii HOM05D004501 ORTHO05D004944 1.1e-13 81.6 300 34.0
HanXRQChr03g0088961 Helianthus annuus HOM05D004501 ORTHO05D004944 1.4e-13 81.3 297 32.3
Solyc08g078320.3 Solanum lycopersicum HOM05D004501 ORTHO05D004944 1.4e-13 81.3 300 32.7
PSO732G0005 Papaver somniferum HOM05D004501 ORTHO05D004944 6.9e-13 79.0 314 29.9
BcaB01g03573 Brassica carinata HOM05D004501 ORTHO05D004944 1.7e-11 74.3 275 31.3
BcaB02g09084 Brassica carinata HOM05D004501 ORTHO05D004944 2.2e-11 73.9 300 31.0
HanXRQChr13g0417701 Helianthus annuus HOM05D004501 ORTHO05D004944 3.2e-10 70.1 294 32.0
ECA240G3755 Erigeron canadensis HOM05D004501 ORTHO05D004944 7.2e-10 68.9 271 29.2
BcaC01g05462 Brassica carinata HOM05D004501 ORTHO05D004944 1.3e-08 64.7 298 28.2
BcaC02g12114 Brassica carinata HOM05D004501 ORTHO05D023925 2.3e-08 63.9 301 30.2
C03p26410 Brassica napus HOM05D004501 ORTHO05D004944 3.9e-08 63.2 298 27.9
Sc01g0008260 Simmondsia chinensis HOM05D004501 ORTHO05D004944 2.5e-07 60.5 246 31.3


User provided reference genes

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