Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc75.52 Carica papaya HOM05D005966 ORTHO05D007584 1.2e-66 256.5 148 100.0
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 8.6e-36 154.1 100 76.0
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 2.1e-34 149.4 100 84.0
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 2.8e-34 149.1 100 79.0
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 3.6e-34 148.7 100 81.0
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 4.7e-34 148.3 100 80.0
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.4e-33 146.7 100 82.0
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.4e-33 146.7 100 81.0
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.4e-33 146.7 100 81.0
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 3.0e-33 145.6 100 79.0
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 3.0e-33 145.6 100 73.0
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 3.0e-33 145.6 99 84.8
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 4.0e-33 145.2 100 70.0
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 5.2e-33 144.8 100 82.0
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 5.2e-33 144.8 100 71.0
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 1.2e-32 143.7 100 69.0
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 1.5e-32 143.3 100 74.0
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 1.5e-32 143.3 100 74.0
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 1.5e-32 143.3 100 74.0
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 1.5e-32 143.3 100 73.0
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 2.0e-32 142.9 100 73.0
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 2.0e-32 142.9 103 68.9
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 2.6e-32 142.5 100 71.0
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 3.4e-32 142.1 96 71.9
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 3.4e-32 142.1 96 71.9
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 3.4e-32 142.1 105 68.6
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 5.8e-32 141.4 100 66.0
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 5.8e-32 141.4 100 66.0
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 7.5e-32 141.0 100 73.0
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 7.5e-32 141.0 111 67.6
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 7.5e-32 141.0 100 70.0
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 9.8e-32 140.6 101 84.2
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 9.8e-32 140.6 101 84.2
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 9.8e-32 140.6 102 76.5
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 9.8e-32 140.6 100 69.0
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 1.3e-31 140.2 100 79.0
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 1.7e-31 139.8 101 73.3
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 1.7e-31 139.8 100 71.0
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 1.7e-31 139.8 104 68.3
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 2.9e-31 139.0 102 75.5
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 4.9e-31 138.3 107 73.8
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 4.9e-31 138.3 99 67.7
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 6.4e-31 137.9 100 72.0
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 6.4e-31 137.9 100 78.0
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 6.4e-31 137.9 100 84.0
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 6.4e-31 137.9 104 77.9
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 8.3e-31 137.5 100 69.0
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 1.4e-30 136.7 100 73.0
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 1.9e-30 136.3 101 69.3
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 1.9e-30 136.3 96 80.2
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 1.9e-30 136.3 99 66.7
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 2.4e-30 136.0 96 79.2
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 2.4e-30 136.0 104 76.9
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 3.2e-30 135.6 107 77.6
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 3.2e-30 135.6 100 69.0
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 4.1e-30 135.2 96 70.8
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 4.1e-30 135.2 96 69.8
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 7.0e-30 134.4 105 63.8
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 9.2e-30 134.0 96 79.2
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 9.2e-30 134.0 100 66.0
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 1.2e-29 133.7 100 65.0
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 1.2e-29 133.7 104 76.0
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 1.6e-29 133.3 104 64.4
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 2.0e-29 132.9 100 67.0
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 2.0e-29 132.9 107 61.7
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 2.0e-29 132.9 97 67.0
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 2.0e-29 132.9 100 65.0
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 2.0e-29 132.9 100 81.0
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 2.7e-29 132.5 100 67.0
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 2.7e-29 132.5 102 67.6
FAN08G0676 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.7e-29 132.5 102 67.6
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.7e-29 132.5 102 67.6
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.7e-29 132.5 102 67.6
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 2.7e-29 132.5 102 67.6
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 3.5e-29 132.1 100 71.0
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 3.5e-29 132.1 105 64.8
Sc08g0006740 Simmondsia chinensis HOM05D005966 ORTHO05D007584 3.5e-29 132.1 100 66.0
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 4.6e-29 131.7 100 70.0
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 4.6e-29 131.7 96 71.9
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 4.6e-29 131.7 96 72.9
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 4.6e-29 131.7 104 75.0
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 4.6e-29 131.7 104 75.0
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 2.3e-28 129.4 104 72.1
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 3.0e-28 129.0 105 61.9
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 5.0e-28 128.3 105 61.9
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.5e-27 126.7 109 69.7
Glyma.14G007400 Glycine max HOM05D005966 ORTHO05D007584 1.9e-27 126.3 96 64.6
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.6e-26 123.2 112 67.0
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 4.7e-26 121.7 101 75.2
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 1.1e-25 120.6 102 55.9
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 5.2e-25 118.2 102 60.8
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 8.9e-25 117.5 98 59.2
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 1.5e-24 116.7 98 60.2
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 1.1e-22 110.5 98 58.2
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 1.4e-22 110.2 98 58.2
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 2.1e-21 106.3 100 54.0
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 3.5e-21 105.5 79 65.8
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 1.2e-18 97.1 99 48.5
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 8.1e-18 94.4 98 44.9
GSVIVG01027692001 Vitis vinifera HOM05D005966 ORTHO05D007584 5.2e-17 91.7 51 82.4
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 6.8e-17 91.3 100 44.0
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 8.9e-17 90.9 100 44.0
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 8.9e-17 90.9 55 72.7
SHI18657 Sapria himalayana HOM05D005966 ORTHO05D007584 3.7e-15 85.5 70 60.0
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 1.7e-12 76.6 76 68.4
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 2.3e-12 76.3 98 44.9
Mapoly0010s0026 Marchantia polymorpha HOM05D005966 ORTHO05D007584 3.0e-12 75.9 98 41.8
Pp3c3_25450 Physcomitrium patens HOM05D005966 ORTHO05D007584 3.9e-12 75.5 96 38.5
CDE11G0857 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 2.1e-10 69.7 75 50.7
Aqoxy7G02129 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 3.1e-09 65.9 82 48.8
SMO200G0046 Selaginella moellendorffii HOM05D005966 ORTHO05D007584 6.8e-09 64.7 92 33.7
AagrBONN_evm.TU.Sc2ySwM_117.630 Anthoceros agrestis HOM05D005966 ORTHO05D007584 1.1e-06 57.4 94 31.9


User provided reference genes

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