Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc70.65 Carica papaya HOM05D000268 ORTHO05D043546 1.3e-110 403.3 231 100.0
ClCG05G012610 Citrullus lanatus HOM05D000268 ORTHO05D043546 4.3e-18 95.9 186 46.2
CsaV3_3G027790 Cucumis sativus L. HOM05D000268 ORTHO05D000261 2.1e-17 93.6 183 38.8
MELO3C014780.2 Cucumis melo HOM05D000268 ORTHO05D000261 4.0e-16 89.4 184 40.8
Sed0001012 Sechium edule HOM05D000268 ORTHO05D000261 2.9e-14 83.2 222 38.3
Sabra02G0181400 Salix brachista HOM05D000268 ORTHO05D000261 6.5e-14 82.0 207 39.1
MD09G1002600 Malus domestica HOM05D000268 ORTHO05D000261 1.1e-13 81.3 188 43.1
MD17G1006800 Malus domestica HOM05D000268 ORTHO05D000261 3.2e-13 79.7 191 44.0
Manes.04G093100 Manihot esculenta HOM05D000268 ORTHO05D000261 1.6e-12 77.4 202 38.1
Gohir.D04G073300 Gossypium hirsutum HOM05D000268 ORTHO05D000261 3.5e-12 76.3 218 34.9
Gorai.012G082600 Gossypium raimondii HOM05D000268 ORTHO05D000261 3.5e-12 76.3 218 34.9
Sed0027464 Sechium edule HOM05D000268 ORTHO05D000261 3.5e-12 76.3 198 34.8
Potri.002G237950 Populus trichocarpa HOM05D000268 ORTHO05D000261 1.0e-11 74.7 184 43.5
Potri.014G143900 Populus trichocarpa HOM05D000268 ORTHO05D000261 1.0e-11 74.7 207 39.6
Cfa007163 Carpinus fangiana HOM05D000268 ORTHO05D000261 3.0e-11 73.2 196 36.2
Lalb_Chr22g0359981 Lupinus albus HOM05D000268 ORTHO05D000261 3.9e-11 72.8 209 35.9
Duzib147G1174 Durio zibethinus HOM05D000268 ORTHO05D000261 6.7e-11 72.0 197 36.0
Gohir.A05G334400 Gossypium hirsutum HOM05D000268 ORTHO05D000261 6.7e-11 72.0 226 33.6
Prupe.3G313600 Prunus persica HOM05D000268 ORTHO05D000261 8.7e-11 71.6 192 40.1
Glyma.16G047800 Glycine max HOM05D000268 ORTHO05D000261 1.5e-10 70.9 200 34.5
Ah.02g128840 Amaranthus hybridus HOM05D000268 ORTHO05D000261 1.9e-10 70.5 182 36.8
THA.LOC104822423 Tarenaya hassleriana HOM05D000268 ORTHO05D000261 1.9e-10 70.5 186 33.3
Thecc.04G047900 Theobroma cacao HOM05D000268 ORTHO05D000261 2.5e-10 70.1 218 32.6
Haze_14950 Corylus avellana HOM05D000268 ORTHO05D000261 3.3e-10 69.7 209 33.5
Lj1g0012834 Lotus japonicus HOM05D000268 ORTHO05D000261 4.3e-10 69.3 217 30.9
QL02p069506 Quercus lobata HOM05D000268 ORTHO05D000261 5.7e-10 68.9 100 52.0
Atru.chr6.2694 Acer truncatum HOM05D000268 ORTHO05D000261 7.4e-10 68.6 171 34.5
SHI11394 Sapria himalayana HOM05D000268 ORTHO05D000261 1.3e-09 67.8 223 31.8
COL.COLO4_27624 Corchorus olitorius HOM05D000268 ORTHO05D000261 1.6e-09 67.4 223 32.7
COL.COLO4_13375 Corchorus olitorius HOM05D000268 ORTHO05D000261 2.8e-09 66.6 229 38.0
MBI10_g42794_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D000261 4.8e-09 65.9 218 31.2
Eucgr.G01930 Eucalyptus grandis HOM05D000268 ORTHO05D000261 6.3e-09 65.5 192 37.5
Hma1.2p1_0868F.1_g230480 Hydrangea macrophylla HOM05D000268 ORTHO05D000261 6.3e-09 65.5 73 47.9
CiPaw.04G001400 Carya illinoinensis HOM05D000268 ORTHO05D000261 1.1e-08 64.7 140 40.0
CSS0021102 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D000261 1.4e-08 64.3 75 49.3
CAN.G473.159 Capsicum annuum HOM05D000268 ORTHO05D000261 3.1e-08 63.2 92 39.1
Glyma.13G166000 Glycine max HOM05D000268 ORTHO05D000261 3.1e-08 63.2 186 33.9
RcHm_v2.0_Chr2g0176511 Rosa chinensis HOM05D000268 ORTHO05D000261 3.1e-08 63.2 148 37.2
Sc16g0004340 Simmondsia chinensis HOM05D000268 ORTHO05D000261 3.1e-08 63.2 120 37.5
MSTRG.24120 Avicennia marina HOM05D000268 ORTHO05D000261 4.1e-08 62.8 72 45.8
EL10Ac6g13405 Beta vulgaris HOM05D000268 ORTHO05D000261 4.1e-08 62.8 176 33.5
TAR475G0006 Trochodendron aralioides HOM05D000268 ORTHO05D000261 5.3e-08 62.4 180 34.4
FAN02G1853 Fragaria x ananassa HOM05D000877 ORTHO05D001509 9.0e-08 61.6 153 39.9
Ah.03g136410 Amaranthus hybridus HOM05D000268 ORTHO05D000261 2.0e-07 60.5 192 31.8
AUR62017429 Chenopodium quinoa HOM05D000268 ORTHO05D000261 2.0e-07 60.5 163 35.6
Dinv25617 Davidia involucrata HOM05D000268 ORTHO05D000261 2.0e-07 60.5 201 32.8
vmacro18380 Vaccinium macrocarpon HOM05D000268 ORTHO05D000261 2.0e-07 60.5 118 40.7
AUR62037824 Chenopodium quinoa HOM05D000268 ORTHO05D000261 4.5e-07 59.3 169 34.3
Dinv19308 Davidia involucrata HOM05D000268 ORTHO05D000261 4.5e-07 59.3 103 35.9
Solyc02g094520.3 Solanum lycopersicum HOM05D000268 ORTHO05D000261 5.9e-07 58.9 186 29.6
Sopen02g039200 Solanum pennellii HOM05D000268 ORTHO05D000261 1.3e-06 57.8 182 30.8
Sc04g0004620 Simmondsia chinensis HOM05D000268 ORTHO05D000261 2.9e-06 56.6 166 32.5
VMungo1383G2161 Vigna mungo HOM05D000268 ORTHO05D000261 2.9e-06 56.6 188 34.6
Hma1.2p1_0421F.1_g149950 Hydrangea macrophylla HOM05D000268 ORTHO05D000261 3.8e-06 56.2 67 44.8
Aqoxy5G03142 Aquilegia oxysepala HOM05D000268 ORTHO05D000261 5.0e-06 55.8 199 33.7
CANSAT64G0556 Cannabis sativa HOM05D000268 ORTHO05D000261 5.0e-06 55.8 141 36.2
FAN09G1101 Fragaria x ananassa HOM05D000268 ORTHO05D000261 8.5e-06 55.1 139 41.7


User provided reference genes

Program Settings