Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc7.69 Carica papaya HOM05D000715 ORTHO05D118304 3.6e-45 184.5 90 100.0
TWI38G1367 Tripterygium wilfordii HOM05D000715 ORTHO05D000024 5.1e-15 84.3 110 48.2
TWI38G1932 Tripterygium wilfordii HOM05D000715 ORTHO05D000024 2.5e-14 82.0 107 45.8
Duzib235G0220 Durio zibethinus HOM05D000715 ORTHO05D000024 3.6e-13 78.2 95 50.5
Prupe.4G061400 Prunus persica HOM05D000715 ORTHO05D000024 4.7e-13 77.8 104 48.1
Thecc.06G170700 Theobroma cacao HOM05D000715 ORTHO05D000024 8.1e-13 77.0 96 51.0
Duzib192G0384 Durio zibethinus HOM05D000715 ORTHO05D000024 1.1e-12 76.6 98 50.0
Duzib192G0959 Durio zibethinus HOM05D000715 ORTHO05D000024 1.1e-12 76.6 98 50.0
Haze_06231 Corylus avellana HOM05D000715 ORTHO05D000024 1.4e-12 76.3 89 52.8
Duzib160G0029 Durio zibethinus HOM05D000715 ORTHO05D000024 2.4e-12 75.5 95 50.5
Cfa000607 Carpinus fangiana HOM05D000715 ORTHO05D000024 3.1e-12 75.1 89 51.7
Ciclev10018094m.g Citrus clementina HOM05D000715 ORTHO05D000024 4.0e-12 74.7 100 49.0
COL.COLO4_31296 Corchorus olitorius HOM05D000715 ORTHO05D000024 4.0e-12 74.7 98 50.0
Rhsim13G0189900 Rhododendron simsii HOM05D000715 ORTHO05D000024 1.2e-11 73.2 110 46.4
Actinidia16797 Actinidia chinensis HOM05D000715 ORTHO05D000024 2.6e-11 72.0 110 45.5
CiPaw.10G058900 Carya illinoinensis HOM05D000715 ORTHO05D000024 2.6e-11 72.0 93 47.3
Dinv40675 Davidia involucrata HOM05D000715 ORTHO05D000024 2.6e-11 72.0 104 44.2
MD10G1280000 Malus domestica HOM05D000715 ORTHO05D000024 3.4e-11 71.6 104 45.2
Dinv16767 Davidia involucrata HOM05D005180 ORTHO05D006136 4.4e-11 71.2 108 41.7
Atru.chr10.1668 Acer truncatum HOM05D000715 ORTHO05D000024 5.8e-11 70.9 101 47.5
Sabra11G0047500 Salix brachista HOM05D000715 ORTHO05D000024 5.8e-11 70.9 107 43.9
Gohir.A05G154900 Gossypium hirsutum HOM05D000715 ORTHO05D000024 7.6e-11 70.5 106 45.3
Gohir.D05G157900 Gossypium hirsutum HOM05D000715 ORTHO05D000024 7.6e-11 70.5 106 45.3
Gorai.009G162500 Gossypium raimondii HOM05D000715 ORTHO05D000024 7.6e-11 70.5 106 45.3
Potri.011G065900 Populus trichocarpa HOM05D000715 ORTHO05D000024 7.6e-11 70.5 108 43.5
Gohir.D06G137100 Gossypium hirsutum HOM05D000715 ORTHO05D000024 9.9e-11 70.1 109 45.9
Gorai.010G159300 Gossypium raimondii HOM05D000715 ORTHO05D000024 9.9e-11 70.1 109 45.9
FAN11G0880 Fragaria x ananassa HOM05D000715 ORTHO05D000024 1.3e-10 69.7 114 43.9
GSVIVG01021212001 Vitis vinifera HOM05D000715 ORTHO05D000024 1.3e-10 69.7 106 43.4
Gohir.A10G037400 Gossypium hirsutum HOM05D000715 ORTHO05D000024 1.7e-10 69.3 100 49.0
Gohir.D10G038200 Gossypium hirsutum HOM05D000715 ORTHO05D000024 1.7e-10 69.3 102 46.1
Gorai.011G040200 Gossypium raimondii HOM05D000715 ORTHO05D000024 1.7e-10 69.3 102 46.1
Lj4g0027706 Lotus japonicus HOM05D000715 ORTHO05D000024 2.2e-10 68.9 98 41.8
Gohir.A06G131000 Gossypium hirsutum HOM05D000715 ORTHO05D000024 2.9e-10 68.6 109 45.0
Manes.17G055700 Manihot esculenta HOM05D000715 ORTHO05D000024 2.9e-10 68.6 107 43.0
FAN16G1143 Fragaria x ananassa HOM05D000715 ORTHO05D000024 3.8e-10 68.2 113 43.4
FAN21G1926 Fragaria x ananassa HOM05D000715 ORTHO05D000024 3.8e-10 68.2 114 43.0
Manes.16G039600 Manihot esculenta HOM05D000715 ORTHO05D000024 3.8e-10 68.2 106 43.4
CSS0012691 Camellia sinensis var. sinensis HOM05D000715 ORTHO05D000024 4.9e-10 67.8 103 41.7
Potri.004G056900 Populus trichocarpa HOM05D000715 ORTHO05D000024 4.9e-10 67.8 108 42.6
Rhsim02G0142700 Rhododendron simsii HOM05D000715 ORTHO05D000024 4.9e-10 67.8 109 44.0
CiPaw.09G069700 Carya illinoinensis HOM05D000715 ORTHO05D000024 6.4e-10 67.4 94 45.7
FAN25G0334 Fragaria x ananassa HOM05D000715 ORTHO05D000024 6.4e-10 67.4 114 43.0
MD05G1301100 Malus domestica HOM05D000715 ORTHO05D000024 6.4e-10 67.4 104 44.2
Hma1.2p1_0215F.1_g090840 Hydrangea macrophylla HOM05D000715 ORTHO05D000024 8.4e-10 67.0 103 41.7
Hma1.2p1_1591F.1_g292500 Hydrangea macrophylla HOM05D000715 ORTHO05D000024 8.4e-10 67.0 103 41.7
Medtr2g016030 Medicago truncatula HOM05D000715 ORTHO05D000024 8.4e-10 67.0 93 45.2
RcHm_v2.0_Chr5g0010791 Rosa chinensis HOM05D000715 ORTHO05D000024 8.4e-10 67.0 106 43.4
Lj6g0004923 Lotus japonicus HOM05D000715 ORTHO05D000024 1.1e-09 66.6 107 41.1
MSTRG.16150 Avicennia marina HOM05D000715 ORTHO05D000024 1.4e-09 66.2 109 40.4
Oeu003911.1 Olea europaea HOM05D000715 ORTHO05D000024 1.4e-09 66.2 103 42.7
Ca_00435_v3 Cicer arietinum L. HOM05D000715 ORTHO05D000024 1.9e-09 65.9 94 42.6
Glyma.05G158200 Glycine max HOM05D000715 ORTHO05D000024 2.4e-09 65.5 96 44.8
MSTRG.13219 Avicennia marina HOM05D000715 ORTHO05D000024 3.2e-09 65.1 108 40.7
FvH4_3g07790 Fragaria vesca HOM05D000715 ORTHO05D000024 3.2e-09 65.1 113 44.2
arahy.Tifrunner.gnm1.ann1.915EMH Arachis hypogaea HOM05D000715 ORTHO05D000024 5.4e-09 64.3 109 44.0
Cc02_g14960 Coffea canephora HOM05D000715 ORTHO05D000024 5.4e-09 64.3 107 41.1
DCAR_004007 Daucus carota HOM05D000715 ORTHO05D000024 5.4e-09 64.3 114 37.7
QL05p047095 Quercus lobata HOM05D000715 ORTHO05D000024 5.4e-09 64.3 96 44.8
Carub.0004s1577 Capsella rubella HOM05D000715 ORTHO05D000024 7.1e-09 63.9 108 39.8
Migut.M01039 Erythranthe guttata HOM05D000715 ORTHO05D000024 7.1e-09 63.9 93 43.0
arahy.Tifrunner.gnm1.ann1.FCS600 Arachis hypogaea HOM05D000715 ORTHO05D000024 1.2e-08 63.2 107 43.9
Nn1g09129 Nelumbo nucifera HOM05D000715 ORTHO05D000024 1.2e-08 63.2 95 43.2
Carub.0001s2736 Capsella rubella HOM05D000715 ORTHO05D000024 2.1e-08 62.4 120 37.5
DCAR_028002 Daucus carota HOM05D000715 ORTHO05D000024 2.1e-08 62.4 104 41.3
Phvul.002G238400 Phaseolus vulgaris HOM05D000715 ORTHO05D000024 2.1e-08 62.4 103 36.9
VMungo0251G1692 Vigna mungo HOM05D000715 ORTHO05D000024 2.1e-08 62.4 95 40.0
CANSAT35G2043 Cannabis sativa HOM05D000715 ORTHO05D000024 2.7e-08 62.0 115 42.6
CARHR028470 Cardamine hirsuta HOM05D000715 ORTHO05D000024 2.7e-08 62.0 112 38.4
Oeu039921.1 Olea europaea HOM05D000715 ORTHO05D000024 2.7e-08 62.0 106 38.7
AT2G34140 Arabidopsis thaliana HOM05D000715 ORTHO05D000024 3.5e-08 61.6 108 38.9
BcaC05g26932 Brassica carinata HOM05D000715 ORTHO05D000024 3.5e-08 61.6 111 38.7
C05p27850 Brassica napus HOM05D000715 ORTHO05D000024 3.5e-08 61.6 111 38.7
BolC5t31506H Brassica oleracea HOM05D000715 ORTHO05D000024 3.5e-08 61.6 111 38.7
AL1G42870 Arabidopsis lyrata HOM05D000715 ORTHO05D000024 4.6e-08 61.2 111 39.6
Nitab4.5_0000605g0210 Nicotiana tabacum HOM05D000715 ORTHO05D000024 4.6e-08 61.2 105 39.0
Sp1g25090 Schrenkiella parvula HOM05D000715 ORTHO05D000024 6.0e-08 60.8 114 37.7
BcaB07g32500 Brassica carinata HOM05D000715 ORTHO05D000024 7.8e-08 60.5 114 37.7
Thhalv10017316m.g Eutrema salsugineum HOM05D000715 ORTHO05D000024 7.8e-08 60.5 111 38.7
Psat1g197640 Pisum sativum HOM05D000715 ORTHO05D000024 7.8e-08 60.5 93 45.2
AT1G29160 Arabidopsis thaliana HOM05D000715 ORTHO05D000024 1.0e-07 60.1 112 38.4
PGR004G1428 Punica granatum HOM05D000715 ORTHO05D000024 1.0e-07 60.1 109 41.3
BcaB06g28736 Brassica carinata HOM05D000715 ORTHO05D000024 1.3e-07 59.7 106 40.6
BcaC01g00077 Brassica carinata HOM05D000715 ORTHO05D000024 1.7e-07 59.3 112 38.4
BcaC01g00078 Brassica carinata HOM05D000715 ORTHO05D000024 1.7e-07 59.3 112 38.4
C03p75550 Brassica napus HOM05D000715 ORTHO05D000024 1.7e-07 59.3 112 38.4
BolC3t19812H Brassica oleracea HOM05D000715 ORTHO05D000024 1.7e-07 59.3 112 38.4
A08p25290 Brassica napus HOM05D000715 ORTHO05D000024 2.3e-07 58.9 112 37.5
A09p37170 Brassica napus HOM05D000715 ORTHO05D000024 2.3e-07 58.9 113 37.2
BraA09t39233Z Brassica rapa HOM05D000715 ORTHO05D000024 2.3e-07 58.9 113 37.2
CARHR128230 Cardamine hirsuta HOM05D000715 ORTHO05D000024 2.3e-07 58.9 109 39.4
BcaC02g07792 Brassica carinata HOM05D000715 ORTHO05D000024 3.0e-07 58.5 107 39.3
A04p26190 Brassica napus HOM05D000715 ORTHO05D000024 3.0e-07 58.5 107 39.3
BolC4t27827H Brassica oleracea HOM05D000715 ORTHO05D000024 3.0e-07 58.5 107 39.3
BraA04t18122Z Brassica rapa HOM05D000715 ORTHO05D000024 3.0e-07 58.5 107 39.3
Glyma.13G230200 Glycine max HOM05D000715 ORTHO05D000024 3.0e-07 58.5 105 40.0
BcaB03g12140 Brassica carinata HOM05D000715 ORTHO05D000024 3.9e-07 58.2 113 36.3
BraA08t34480Z Brassica rapa HOM05D000715 ORTHO05D000024 3.9e-07 58.2 112 37.5
Lalb_Chr20g0117441 Lupinus albus HOM05D000715 ORTHO05D000024 3.9e-07 58.2 104 39.4
Actinidia35577 Actinidia chinensis HOM05D000715 ORTHO05D000024 5.1e-07 57.8 55 60.0
ClCG01G023730 Citrullus lanatus HOM05D000715 ORTHO05D000024 5.1e-07 57.8 103 38.8
Nitab4.5_0001923g0010 Nicotiana tabacum HOM05D000715 ORTHO05D000024 5.1e-07 57.8 114 36.0
Aa31LG9G13910 Aethionema arabicum HOM05D000715 ORTHO05D000024 6.6e-07 57.4 112 38.4
C04p63570 Brassica napus HOM05D000715 ORTHO05D000024 6.6e-07 57.4 109 38.5
MELO3C000201.2 Cucumis melo HOM05D000715 ORTHO05D000024 6.6e-07 57.4 108 38.0
Thhalv10008914m.g Eutrema salsugineum HOM05D000715 ORTHO05D000024 6.6e-07 57.4 110 38.2
arahy.Tifrunner.gnm1.ann1.0M6VMZ Arachis hypogaea HOM05D000715 ORTHO05D000024 8.7e-07 57.0 120 34.2
Aa31LG6G6380 Aethionema arabicum HOM05D000715 ORTHO05D000024 1.1e-06 56.6 108 38.0
MELO3C002649.2 Cucumis melo HOM05D000715 ORTHO05D000024 1.1e-06 56.6 107 38.3
Sabra04G0036800 Salix brachista HOM05D000715 ORTHO05D000024 1.5e-06 56.2 105 36.2
CsaV3_6G050890 Cucumis sativus L. HOM05D000715 ORTHO05D000024 1.9e-06 55.8 108 37.0
Lj2P298T33 Lonicera japonica HOM05D000715 ORTHO05D000024 1.9e-06 55.8 95 41.1
Nn1g04412 Nelumbo nucifera HOM05D000715 ORTHO05D000024 1.9e-06 55.8 102 40.2
THA.LOC104814255 Tarenaya hassleriana HOM05D000715 ORTHO05D000024 1.9e-06 55.8 126 35.7
TAR629G2410 Trochodendron aralioides HOM05D000715 ORTHO05D000024 1.9e-06 55.8 92 42.4
CSS0004360 Camellia sinensis var. sinensis HOM05D000715 ORTHO05D000024 2.5e-06 55.5 105 40.0
Glyma.15G082400 Glycine max HOM05D000715 ORTHO05D000024 2.5e-06 55.5 104 39.4
Sed0026836 Sechium edule HOM05D000715 ORTHO05D000024 2.5e-06 55.5 100 39.0
Sc05g0007100 Simmondsia chinensis HOM05D000715 ORTHO05D000024 2.5e-06 55.5 94 37.2
Sc17g0005740 Simmondsia chinensis HOM05D000715 ORTHO05D000024 2.5e-06 55.5 93 38.7
Lsat_1_v5_gn_4_49661 Lactuca sativa HOM05D000715 ORTHO05D000024 4.3e-06 54.7 96 40.6
Sed0018148 Sechium edule HOM05D000715 ORTHO05D000024 4.3e-06 54.7 101 37.6
AL4G30030 Arabidopsis lyrata HOM05D000715 ORTHO05D000024 5.6e-06 54.3 108 36.1
Nitab4.5_0002076g0040 Nicotiana tabacum HOM05D000715 ORTHO05D000024 5.6e-06 54.3 101 41.6
Solyc02g076850.2 Solanum lycopersicum HOM05D000715 ORTHO05D000024 5.6e-06 54.3 120 39.2
PGSC0003DMG400037029 Solanum tuberosum HOM05D000715 ORTHO05D000024 5.6e-06 54.3 120 39.2
Peaxi162Scf00778g00021 Petunia axillaris HOM05D000715 ORTHO05D000024 7.3e-06 53.9 103 35.9
Sopen02g021750 Solanum pennellii HOM05D000715 ORTHO05D000024 9.6e-06 53.5 119 37.8


User provided reference genes

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