Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 4.3e-275 950.7 462 100.0
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.6e-242 842.4 463 88.6
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 7.6e-240 833.6 457 88.4
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 4.2e-238 827.8 465 86.9
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 5.4e-238 827.4 462 85.7
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 1.6e-237 825.9 455 87.7
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 3.0e-236 821.6 469 85.5
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.5e-235 819.3 457 86.4
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.9e-235 818.9 456 87.3
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 2.8e-234 815.1 469 85.1
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 3.6e-234 814.7 443 86.9
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.1e-233 813.1 462 84.8
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 2.4e-233 812.0 463 84.0
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.3e-233 810.8 459 84.5
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 6.9e-233 810.4 462 84.6
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 6.9e-233 810.4 454 85.7
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 9.0e-233 810.1 459 86.1
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.5e-232 809.3 460 84.1
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 2.6e-232 808.5 464 84.5
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 9.9e-232 806.6 463 83.4
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.3e-231 806.2 462 84.6
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.3e-231 806.2 460 84.8
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.7e-231 805.8 463 82.9
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.8e-231 804.7 465 84.9
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 6.4e-231 803.9 483 81.4
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 8.4e-231 803.5 463 83.4
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 8.4e-231 803.5 428 89.5
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.1e-230 803.1 455 84.4
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.1e-230 803.1 434 88.2
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.4e-230 802.7 430 87.7
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.4e-230 802.7 433 87.5
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.9e-230 802.4 459 84.5
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.9e-230 802.4 437 86.7
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 2.4e-230 802.0 463 82.9
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 4.2e-230 801.2 451 84.7
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.4e-230 800.8 466 84.5
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 7.1e-230 800.4 446 86.1
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 9.3e-230 800.0 441 84.8
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.6e-229 799.3 427 88.5
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.6e-229 799.3 462 83.3
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 2.1e-229 798.9 455 83.5
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 2.1e-229 798.9 461 84.8
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 3.5e-229 798.1 480 81.2
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 4.6e-229 797.7 456 84.4
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 6.0e-229 797.3 455 82.9
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 7.9e-229 797.0 455 83.1
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 7.9e-229 797.0 447 85.2
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 1.0e-228 796.6 456 83.8
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 1.3e-228 796.2 465 83.9
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.3e-228 796.2 429 88.1
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.8e-228 795.8 461 84.2
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 3.0e-228 795.0 435 88.0
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 6.7e-228 793.9 462 82.9
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 8.7e-228 793.5 450 84.2
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.1e-227 793.1 464 81.9
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 4.3e-227 791.2 465 81.5
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 7.4e-227 790.4 465 81.7
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 9.6e-227 790.0 436 85.8
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.3e-226 789.6 461 82.6
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 2.8e-226 788.5 466 81.3
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 2.8e-226 788.5 465 82.2
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 6.2e-226 787.3 443 84.9
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.0e-225 784.6 462 83.1
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 9.0e-225 783.5 440 84.3
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 5.8e-224 780.8 458 82.1
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 1.3e-223 779.6 433 84.1
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 6.5e-223 777.3 435 84.4
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.2e-221 773.1 419 85.7
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 1.6e-221 772.7 415 86.7
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.8e-220 769.2 477 77.8
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 9.6e-219 763.5 459 78.9
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.4e-217 759.6 447 80.1
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 5.3e-217 757.7 446 83.4
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 2.0e-216 755.7 435 83.7
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 2.2e-215 752.3 423 82.7
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 2.9e-215 751.9 422 83.4
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 3.2e-214 748.4 401 88.8
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.0e-212 743.4 432 80.6
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 1.8e-212 742.7 429 81.6
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.8e-212 742.7 443 81.0
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 1.3e-210 736.5 401 86.5
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.3e-210 736.5 515 72.8
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.5e-208 729.6 427 79.2
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 5.9e-208 727.6 452 80.1
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.7e-207 726.1 475 76.4
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 2.0e-203 712.6 465 73.3
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 3.3e-203 711.8 423 78.3
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.2e-202 709.1 429 79.0
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 4.8e-202 708.0 382 89.0
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.3e-201 704.5 492 72.6
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.0e-199 700.3 401 84.8
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 3.6e-197 691.8 393 84.7
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.5e-195 686.4 561 64.5
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 1.0e-191 673.7 462 72.9
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 1.5e-190 669.8 387 83.5
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.0e-184 649.4 448 68.3
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 8.5e-183 644.0 357 85.7
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.7e-181 638.3 434 72.8
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 4.0e-172 608.6 430 66.0
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.4e-169 599.4 426 66.4
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 5.4e-169 598.2 377 78.5
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 6.8e-164 581.3 495 63.4
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 1.1e-142 510.8 305 81.6
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 4.0e-140 502.3 270 88.1
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 8.9e-140 501.1 462 58.0
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 2.6e-139 499.6 305 81.3
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.7e-135 486.9 374 61.8
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 3.1e-116 422.9 263 79.5
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 2.0e-67 260.8 147 83.0
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 2.5e-65 253.8 190 70.0
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.7e-61 241.1 147 76.2
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 6.6e-42 176.0 98 80.6
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.9e-28 131.3 79 75.9
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 3.5e-27 127.1 70 88.6
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 3.0e-18 97.4 57 78.9
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 7.3e-17 92.8 49 89.8
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.6e-11 73.6 46 73.9
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 7.8e-11 72.8 43 76.7
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.0e-10 70.9 42 73.8
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 3.6e-08 63.9 40 77.5


User provided reference genes

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