Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 3.5e-138 495.0 256 100.0
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 1.2e-45 187.6 222 46.8
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 2.7e-45 186.4 238 44.5
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 4.6e-45 185.7 231 45.0
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 2.3e-44 183.3 185 51.9
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 3.0e-44 183.0 236 44.1
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 5.1e-44 182.2 236 44.1
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 6.6e-44 181.8 185 51.4
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 6.6e-44 181.8 224 45.1
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 1.9e-43 180.3 236 43.6
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 8.1e-42 174.9 211 46.4
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 8.1e-42 174.9 211 46.0
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 9.0e-41 171.4 219 45.7
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 2.6e-40 169.9 248 43.1
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.4e-40 169.5 228 45.2
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 4.5e-40 169.1 198 48.0
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 9.9e-40 167.9 206 48.1
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 1.3e-39 167.5 226 44.7
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 1.3e-39 167.5 222 44.1
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 3.8e-39 166.0 208 48.1
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 6.4e-39 165.2 228 44.7
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 6.4e-39 165.2 207 46.9
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 8.4e-39 164.9 210 47.1
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.4e-38 164.1 220 44.1
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 2.4e-38 163.3 205 43.9
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 2.4e-38 163.3 228 43.4
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 3.2e-38 162.9 208 47.6
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 5.4e-38 162.2 213 46.9
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 5.4e-38 162.2 179 50.8
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 5.4e-38 162.2 184 50.5
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 7.1e-38 161.8 203 43.3
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 1.2e-37 161.0 216 43.5
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 2.7e-37 159.8 222 42.3
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 4.6e-37 159.1 178 50.0
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 6.0e-37 158.7 154 55.2
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 2.3e-36 156.8 203 41.4
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 5.1e-36 155.6 217 43.8
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 6.7e-36 155.2 210 46.7
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 6.7e-36 155.2 208 42.3
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 8.7e-36 154.8 204 43.1
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.1e-35 154.5 207 44.4
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 1.5e-35 154.1 202 43.6
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 2.5e-35 153.3 216 43.1
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 4.3e-35 152.5 208 43.8
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 5.6e-35 152.1 205 43.4
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 7.4e-35 151.8 202 43.6
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 7.4e-35 151.8 179 49.7
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 1.6e-34 150.6 204 45.1
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 2.1e-34 150.2 211 41.7
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 2.8e-34 149.8 199 43.7
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 6.2e-34 148.7 209 41.6
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 1.1e-33 147.9 178 49.4
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 1.1e-33 147.9 208 41.8
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 6.9e-33 145.2 205 41.5
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 6.9e-33 145.2 183 44.3
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 6.9e-33 145.2 183 44.3
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 1.2e-32 144.4 205 42.4
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 1.2e-32 144.4 216 41.7
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 1.5e-32 144.1 204 41.7
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 1.5e-32 144.1 204 41.7
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 1.5e-32 144.1 204 41.7
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 1.5e-32 144.1 208 43.3
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 2.0e-32 143.7 235 40.4
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 2.6e-32 143.3 206 42.2
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 4.5e-32 142.5 216 38.9
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 5.8e-32 142.1 190 42.6
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 7.6e-32 141.7 201 41.8
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 9.9e-32 141.4 235 40.4
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.3e-31 141.0 182 41.8
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 1.7e-31 140.6 199 41.7
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 1.7e-31 140.6 184 46.2
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 2.2e-31 140.2 207 42.0
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 3.8e-31 139.4 194 40.7
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 1.9e-30 137.1 183 42.1
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 2.5e-30 136.7 201 41.3
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.2e-30 136.3 207 41.1
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 5.5e-30 135.6 159 48.4
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 9.3e-30 134.8 179 41.9
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 2.1e-29 133.7 186 43.5
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 2.7e-29 133.3 217 41.5
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 3.5e-29 132.9 217 35.9
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 4.6e-29 132.5 156 45.5
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 1.0e-28 131.3 182 41.8
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.0e-28 131.3 220 38.6
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 3.0e-28 129.8 224 37.5
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 4.3e-27 125.9 201 38.8
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 9.6e-27 124.8 204 38.2
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 3.7e-26 122.9 216 38.9
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 6.2e-26 122.1 188 38.8
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 3.4e-24 116.3 193 37.3
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 5.8e-24 115.5 203 36.5
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 1.9e-22 110.5 95 58.9
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.6e-21 107.5 183 36.1
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 3.5e-21 106.3 211 33.2
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 4.6e-21 105.9 153 39.2
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 3.9e-20 102.8 206 34.0
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 1.6e-18 97.4 115 46.1
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 3.7e-18 96.3 125 45.6
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 3.1e-17 93.2 189 34.4
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 4.1e-17 92.8 151 39.1
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 5.3e-17 92.4 158 37.3
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 3.9e-12 76.3 206 29.6
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 8.8e-12 75.1 179 29.1
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.3e-10 71.2 179 28.5
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 2.8e-10 70.1 120 39.2
DCAR_011967 Daucus carota HOM05D004059 ORTHO05D004591 1.1e-09 68.2 142 33.1
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 3.1e-09 66.6 172 30.8
AUR62033947 Chenopodium quinoa HOM05D004059 ORTHO05D004591 1.9e-06 57.4 139 32.4
TPR.G13416 Trifolium pratense HOM05D004059 ORTHO05D004591 1.9e-06 57.4 150 30.7
MD15G1208900 Malus domestica HOM05D004059 ORTHO05D004591 2.5e-06 57.0 121 33.9
COL.COLO4_18190 Corchorus olitorius HOM05D004059 ORTHO05D004591 5.5e-06 55.8 130 35.4
MD02G1081600 Malus domestica HOM05D004059 ORTHO05D004591 5.5e-06 55.8 179 28.5
Lj6g0002908 Lotus japonicus HOM05D004059 ORTHO05D004591 7.2e-06 55.5 117 37.6
Hund25946 Selenicereus undatus HOM05D004059 ORTHO05D004591 7.2e-06 55.5 68 44.1


User provided reference genes

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