Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 6.5e-66 253.8 121 100.0
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 6.8e-47 190.7 121 74.4
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 1.5e-46 189.5 121 73.6
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 2.6e-46 188.7 121 74.4
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 5.7e-46 187.6 121 72.7
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 2.4e-44 182.2 121 72.7
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 1.6e-43 179.5 121 71.1
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 2.7e-43 178.7 121 70.2
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 2.7e-43 178.7 121 70.2
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 2.7e-43 178.7 121 70.2
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 2.7e-43 178.7 121 70.2
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 2.7e-43 178.7 121 70.2
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 2.7e-43 178.7 121 70.2
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 3.5e-43 178.3 121 71.1
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 5.9e-43 177.6 121 70.2
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 5.9e-43 177.6 121 70.2
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 1.3e-42 176.4 121 69.4
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 1.3e-42 176.4 121 69.4
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 1.3e-42 176.4 121 69.4
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 1.7e-42 176.0 121 68.6
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 1.7e-42 176.0 121 70.2
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 3.8e-42 174.9 121 70.2
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 8.5e-42 173.7 121 67.8
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 1.5e-41 172.9 121 68.6
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 3.6e-40 168.3 121 66.9
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 5.4e-36 154.5 121 57.9
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 1.0e-34 150.2 121 58.7
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 5.0e-34 147.9 121 60.3
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 1.5e-33 146.4 121 57.0
Ciclev10003775m.g Citrus clementina HOM05D005168 ORTHO05D006358 2.5e-33 145.6 122 56.6
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 3.3e-33 145.2 121 58.7
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 9.5e-33 143.7 121 58.7
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 9.5e-33 143.7 118 56.8
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 3.6e-32 141.7 118 57.6
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 3.6e-32 141.7 121 57.0
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 4.7e-32 141.4 121 56.2
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 1.4e-31 139.8 121 57.9
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 1.5e-30 136.3 121 54.5
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 1.5e-30 136.3 121 54.5
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 2.0e-30 136.0 121 54.5
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 3.4e-30 135.2 118 54.2
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 4.4e-30 134.8 114 54.4
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 7.5e-30 134.0 121 53.7
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 9.8e-30 133.7 121 55.4
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 9.8e-30 133.7 119 52.1
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 1.7e-29 132.9 119 52.9
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 2.9e-29 132.1 119 52.9
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea HOM05D005168 ORTHO05D006358 4.9e-29 131.3 121 53.7
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 6.4e-29 131.0 121 52.1
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 1.1e-28 130.2 122 50.8
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea HOM05D005168 ORTHO05D006358 1.8e-28 129.4 121 52.9
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 4.1e-28 128.3 120 53.3
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 4.1e-28 128.3 112 53.6
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 4.1e-28 128.3 119 51.3
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 7.0e-28 127.5 121 49.6
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 9.2e-28 127.1 121 52.1
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 9.2e-28 127.1 121 49.6
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 9.2e-28 127.1 113 49.6
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 1.2e-27 126.7 122 54.9
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.2e-27 126.7 121 50.4
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 1.2e-27 126.7 121 52.1
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 1.2e-27 126.7 122 50.8
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 1.2e-27 126.7 124 52.4
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 1.6e-27 126.3 117 49.6
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 1.6e-27 126.3 111 54.1
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 2.0e-27 125.9 113 50.4
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 3.5e-27 125.2 119 52.1
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 3.5e-27 125.2 112 52.7
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 3.5e-27 125.2 112 52.7
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 3.5e-27 125.2 114 51.8
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 4.6e-27 124.8 121 48.8
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 5.9e-27 124.4 121 49.6
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 5.9e-27 124.4 113 50.4
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 1.0e-26 123.6 119 48.7
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 1.7e-26 122.9 112 51.8
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 3.0e-26 122.1 117 50.4
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 3.9e-26 121.7 121 52.1
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 3.9e-26 121.7 121 52.1
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 3.9e-26 121.7 121 52.1
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 5.0e-26 121.3 119 50.4
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 6.6e-26 120.9 119 50.4
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 6.6e-26 120.9 119 50.4
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 1.5e-25 119.8 120 48.3
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 1.9e-25 119.4 128 48.4
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 1.9e-25 119.4 128 48.4
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 2.5e-25 119.0 120 48.3
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 4.3e-25 118.2 112 47.3
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 2.1e-24 115.9 117 46.2
FAN23G3095 Fragaria x ananassa HOM05D005168 ORTHO05D006358 1.8e-23 112.8 118 50.8
Dinv40488 Davidia involucrata HOM05D005168 ORTHO05D006358 2.3e-23 112.5 107 57.9
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 5.2e-23 111.3 118 50.0
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 1.5e-22 109.8 112 47.3
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 2.6e-22 109.0 115 46.1
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 3.4e-22 108.6 117 44.4
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 4.4e-22 108.2 106 50.0
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 3.7e-21 105.1 117 43.6
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 1.9e-20 102.8 119 46.2
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 3.2e-20 102.1 99 50.5
Mapoly0043s0107 Marchantia polymorpha HOM05D005168 ORTHO05D006358 9.2e-20 100.5 120 45.0
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 9.2e-20 100.5 96 51.0
SEGI_04309 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 9.2e-20 100.5 123 40.7
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 1.2e-19 100.1 119 42.9
RcHm_v2.0_Chr2g0124111 Rosa chinensis HOM05D005168 ORTHO05D006358 1.1e-17 93.6 117 44.4
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 9.5e-17 90.5 119 39.5
SMO351G0141 Selaginella moellendorffii HOM05D005168 ORTHO05D006358 1.2e-16 90.1 113 41.6
BcaC05g25904 Brassica carinata HOM05D005168 ORTHO05D006358 1.6e-16 89.7 90 53.3
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 2.0e-14 82.8 63 63.5
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 2.6e-14 82.4 68 51.5
Pp3c24_7070 Physcomitrium patens HOM05D005168 ORTHO05D006358 7.5e-14 80.9 152 31.6
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 2.2e-13 79.3 62 59.7
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 2.2e-13 79.3 87 44.8
TPR.G9182 Trifolium pratense HOM05D005168 ORTHO05D006358 2.9e-13 79.0 88 50.0
ATR0057G015 Amborella trichopoda HOM05D005168 ORTHO05D006358 1.4e-12 76.6 91 39.6
CDE09G0329 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 9.2e-12 73.9 74 48.6
Eucgr.F02832 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.6e-11 73.2 81 44.4
Ca_15982_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 2.7e-11 72.4 53 58.5
Aqoxy6G02286 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 4.6e-11 71.6 109 34.9
Cre01.g018000 Chlamydomonas reinhardtii HOM05D005168 ORTHO05D006358 7.8e-11 70.9 123 34.1
Glyma.19G179600 Glycine max HOM05D005168 ORTHO05D006358 7.8e-11 70.9 58 48.3
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 7.8e-11 70.9 53 62.3
Glyma.06G213500 Glycine max HOM05D005168 ORTHO05D006358 1.3e-10 70.1 68 48.5
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 2.3e-10 69.3 52 59.6
Lj4A21T59 Lonicera japonica HOM05D005168 ORTHO05D006358 3.0e-10 68.9 74 43.2
Glyma.08G246200 Glycine max HOM05D005168 ORTHO05D006358 5.1e-10 68.2 58 50.0
Glyma.17G201200 Glycine max HOM05D005168 ORTHO05D006358 6.6e-10 67.8 68 48.5
Glyma.11G172400 Glycine max HOM05D005168 ORTHO05D006358 1.9e-09 66.2 72 45.8
Glyma.08G301902 Glycine max HOM05D005168 ORTHO05D006358 3.3e-09 65.5 72 44.4
FAN26G0870 Fragaria x ananassa HOM05D005168 ORTHO05D006358 1.2e-08 63.5 73 45.2
ECA238G0944 Erigeron canadensis HOM05D005168 ORTHO05D006358 6.2e-08 61.2 70 41.4
ClCG08G014170 Citrullus lanatus HOM05D005168 ORTHO05D006358 1.1e-07 60.5 40 67.5
ClCG08G014180 Citrullus lanatus HOM05D005168 ORTHO05D006358 4.0e-07 58.5 77 44.2
Ah.01g021000 Amaranthus hybridus HOM05D005168 ORTHO05D006358 6.8e-07 57.8 44 59.1
AUR62040557 Chenopodium quinoa HOM05D005168 ORTHO05D006358 6.8e-07 57.8 44 59.1
SHI17132 Sapria himalayana HOM05D005168 ORTHO05D006358 1.5e-06 56.6 48 45.8
AUR62041475 Chenopodium quinoa HOM05D005168 ORTHO05D006358 3.4e-06 55.5 44 56.8
CBR_g23850 Chara braunii HOM05D005168 ORTHO05D006358 5.8e-06 54.7 83 38.6
MCO15G369 Micromonas commoda HOM05D005168 ORTHO05D006358 5.8e-06 54.7 42 50.0


User provided reference genes

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