Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc53.108 Carica papaya HOM05D000810 ORTHO05D001064 2.7e-135 485.3 248 100.0
Cpa.g.sc53.110 Carica papaya HOM05D000810 ORTHO05D001064 1.3e-81 307.0 336 58.0
Cpa.g.sc609.2 Carica papaya HOM05D000810 ORTHO05D001064 8.3e-76 287.7 169 91.1
Cfa001685 Carpinus fangiana HOM05D000810 ORTHO05D001064 4.5e-37 159.1 213 47.4
Ciclev10030594m.g Citrus clementina HOM05D000810 ORTHO05D001064 1.3e-36 157.5 336 36.0
TWI38G0492 Tripterygium wilfordii HOM05D000810 ORTHO05D001064 8.4e-36 154.8 209 45.9
Haze_16846 Corylus avellana HOM05D000810 ORTHO05D001064 2.5e-35 153.3 213 45.1
Thecc.10G079600 Theobroma cacao HOM05D000810 ORTHO05D001064 2.5e-35 153.3 335 35.5
Duzib114G0399 Durio zibethinus HOM05D000810 ORTHO05D001064 2.1e-34 150.2 333 35.1
CiPaw.01G270100 Carya illinoinensis HOM05D000810 ORTHO05D001064 4.6e-34 149.1 215 43.3
Duzib128G0492 Durio zibethinus HOM05D000810 ORTHO05D001064 7.9e-34 148.3 334 36.5
COL.COLO4_12170 Corchorus olitorius HOM05D000810 ORTHO05D001064 8.7e-33 144.8 335 34.9
Cfa001689 Carpinus fangiana HOM05D000810 ORTHO05D001064 3.3e-32 142.9 213 44.6
QL08p054951 Quercus lobata HOM05D000810 ORTHO05D001064 4.0e-30 136.0 217 42.9
Potri.008G036500 Populus trichocarpa HOM05D000810 ORTHO05D001064 1.2e-29 134.4 217 39.6
Gorai.012G005400 Gossypium raimondii HOM05D000810 ORTHO05D001064 3.4e-29 132.9 330 32.7
Sabra08G0024600 Salix brachista HOM05D000810 ORTHO05D001064 3.4e-29 132.9 217 39.6
Cpa.g.sc609.1 Carica papaya HOM05D001005 ORTHO05D000836 5.8e-29 132.1 100 73.0
Gohir.A05G411800 Gossypium hirsutum HOM05D000810 ORTHO05D001064 1.0e-28 131.3 330 33.0
Gohir.D04G004200 Gossypium hirsutum HOM05D000810 ORTHO05D001064 1.0e-28 131.3 330 32.4
Manes.10G049000 Manihot esculenta HOM05D000810 ORTHO05D001064 1.7e-28 130.6 216 38.4
Prupe.2G210200 Prunus persica HOM05D000810 ORTHO05D001064 7.9e-26 121.7 216 37.5
CSS0016544 Camellia sinensis var. sinensis HOM05D000810 ORTHO05D001064 1.3e-25 120.9 215 40.0
Potri.010G225600 Populus trichocarpa HOM05D000810 ORTHO05D001064 1.1e-24 117.9 217 39.2
Dinv36407 Davidia involucrata HOM05D000810 ORTHO05D001064 9.7e-24 114.8 338 32.0
CANSAT56G0988 Cannabis sativa HOM05D000810 ORTHO05D001064 3.7e-23 112.8 184 39.7
Manes.07G095500 Manihot esculenta HOM05D000810 ORTHO05D001064 8.2e-23 111.7 213 36.2
GSVIVG01016236001 Vitis vinifera HOM05D000810 ORTHO05D001064 8.2e-23 111.7 215 38.1
Aa31LG3G2930 Aethionema arabicum HOM05D000810 ORTHO05D001064 1.1e-22 111.3 194 42.8
MD01G1104900 Malus domestica HOM05D000810 ORTHO05D001064 1.1e-22 111.3 213 34.3
CARHR084840 Cardamine hirsuta HOM05D000810 ORTHO05D001064 3.1e-22 109.8 154 46.1
AL3G21690 Arabidopsis lyrata HOM05D000810 ORTHO05D001064 4.1e-22 109.4 198 40.4
CsaV3_5G036100 Cucumis sativus L. HOM05D000810 ORTHO05D001064 4.1e-22 109.4 213 37.6
MD07G1171400 Malus domestica HOM05D000810 ORTHO05D001064 9.0e-22 108.2 217 34.1
Sp3g08630 Schrenkiella parvula HOM05D000810 ORTHO05D001064 1.2e-21 107.8 198 40.4
AT3G10360 Arabidopsis thaliana HOM05D000810 ORTHO05D001064 2.0e-21 107.1 197 39.6
RcHm_v2.0_Chr1g0362841 Rosa chinensis HOM05D000810 ORTHO05D001064 2.0e-21 107.1 217 35.9
Actinidia06744 Actinidia chinensis HOM05D000810 ORTHO05D001064 2.6e-21 106.7 208 37.5
TAR633G1278 Trochodendron aralioides HOM05D000810 ORTHO05D001064 3.4e-21 106.3 214 37.4
ClCG05G021150 Citrullus lanatus HOM05D000810 ORTHO05D001064 5.9e-21 105.5 213 36.2
MBI18_g31601_MAGBIO Magnolia biondii HOM05D000810 ORTHO05D001064 5.9e-21 105.5 216 37.0
Dinv31215 Davidia involucrata HOM05D000810 ORTHO05D001064 1.0e-20 104.8 215 38.1
Carub.0003s0954 Capsella rubella HOM05D000810 ORTHO05D001064 1.3e-20 104.4 158 43.7
MELO3C012411.2 Cucumis melo HOM05D000810 ORTHO05D001064 5.0e-20 102.4 213 37.1
FAN10G0639 Fragaria x ananassa HOM05D000810 ORTHO05D001064 5.0e-20 102.4 217 36.4
FAN10G2666 Fragaria x ananassa HOM05D000810 ORTHO05D001064 1.1e-19 101.3 217 35.5
A03p36490 Brassica napus HOM05D000810 ORTHO05D001064 2.5e-19 100.1 198 38.4
Thhalv10019985m.g Eutrema salsugineum HOM05D000810 ORTHO05D001064 2.5e-19 100.1 194 38.7
FAN01G1297 Fragaria x ananassa HOM05D000810 ORTHO05D001064 2.5e-19 100.1 255 34.1
Rhsim03G0117500 Rhododendron simsii HOM05D000810 ORTHO05D001064 5.5e-19 99.0 208 37.0
THA.LOC104816421 Tarenaya hassleriana HOM05D000810 ORTHO05D001064 5.5e-19 99.0 194 38.1
BraA03t12816Z Brassica rapa HOM05D000810 ORTHO05D001064 9.4e-19 98.2 198 37.9
Nn2g13755 Nelumbo nucifera HOM05D000810 ORTHO05D001064 1.2e-18 97.8 216 34.7
FvH4_7g18910 Fragaria vesca HOM05D000810 ORTHO05D001064 2.7e-18 96.7 217 34.6
FAN06G0037 Fragaria x ananassa HOM05D000810 ORTHO05D001064 2.7e-18 96.7 217 34.6
FAN06G1094 Fragaria x ananassa HOM05D000810 ORTHO05D001064 2.7e-18 96.7 217 34.6
BolC3t16684H Brassica oleracea HOM05D000810 ORTHO05D001064 4.6e-18 95.9 197 36.5
Eucgr.J01068 Eucalyptus grandis HOM05D000810 ORTHO05D001064 4.6e-18 95.9 211 36.0
FAN03G2168 Fragaria x ananassa HOM05D000810 ORTHO05D001064 4.6e-18 95.9 216 34.7
C03p44090 Brassica napus HOM05D000810 ORTHO05D001064 3.0e-17 93.2 197 36.0
CSS0010364 Camellia sinensis var. sinensis HOM05D000810 ORTHO05D001064 1.1e-16 91.3 179 38.0
Nn2g11554 Nelumbo nucifera HOM05D000810 ORTHO05D001064 7.4e-16 88.6 215 35.8
Aqoxy1G01177 Aquilegia oxysepala HOM05D000810 ORTHO05D001064 1.3e-15 87.8 210 29.5
DCAR_006423 Daucus carota HOM05D000810 ORTHO05D001064 6.3e-15 85.5 216 35.2
Sed0022380 Sechium edule HOM05D000810 ORTHO05D001064 1.1e-14 84.7 216 33.3
arahy.Tifrunner.gnm1.ann1.KI2IUQ Arachis hypogaea HOM05D000810 ORTHO05D001064 4.1e-14 82.8 328 27.7
Lalb_Chr02g0152171 Lupinus albus HOM05D000810 ORTHO05D001064 1.5e-13 80.9 328 28.7
arahy.Tifrunner.gnm1.ann1.YE7AHB Arachis hypogaea HOM05D000810 ORTHO05D001064 3.4e-13 79.7 328 27.4
PSO063G3740 Papaver somniferum HOM05D000810 ORTHO05D001064 5.9e-13 79.0 212 29.7
Atru.chr12.826 Acer truncatum HOM05D000810 ORTHO05D001064 1.7e-12 77.4 115 42.6
PSO339G0942 Papaver somniferum HOM05D000810 ORTHO05D001064 5.5e-11 72.4 212 29.2
Lalb_Chr06g0170351 Lupinus albus HOM05D000810 ORTHO05D001064 9.4e-11 71.6 327 26.9
Sc20g0001690 Simmondsia chinensis HOM05D000810 ORTHO05D001064 2.7e-10 70.1 215 30.2
TAR560G0003 Trochodendron aralioides HOM05D000810 ORTHO05D001064 2.7e-10 70.1 221 29.0
C05p57810 Brassica napus HOM05D000810 ORTHO05D001064 6.1e-10 68.9 178 33.7
PSO761G0504 Papaver somniferum HOM05D000810 ORTHO05D001064 6.1e-10 68.9 212 28.8
AL491U10030 Arabidopsis lyrata HOM05D000810 ORTHO05D001064 2.3e-09 67.0 143 36.4
PGR044G1034 Punica granatum HOM05D000810 ORTHO05D001064 3.0e-09 66.6 212 28.8
Ca_10550_v3 Cicer arietinum L. HOM05D000810 ORTHO05D001064 6.7e-09 65.5 327 24.8
Glyma.10G209000 Glycine max HOM05D000810 ORTHO05D001064 6.7e-09 65.5 329 25.5
Nn2g13415 Nelumbo nucifera HOM05D000810 ORTHO05D001064 6.7e-09 65.5 231 27.7
Actinidia13888 Actinidia chinensis HOM05D000810 ORTHO05D001064 8.8e-09 65.1 217 28.1
Oeu020825.2 Olea europaea HOM05D000810 ORTHO05D001064 2.0e-08 63.9 207 29.5
Nn2g11178 Nelumbo nucifera HOM05D000810 ORTHO05D001064 2.6e-08 63.5 228 26.8
Lalb_Chr21g0313771 Lupinus albus HOM05D000810 ORTHO05D001064 3.3e-08 63.2 195 28.2
VMungo0720G0985 Vigna mungo HOM05D000810 ORTHO05D001064 3.3e-08 63.2 204 28.9
Dinv06763 Davidia involucrata HOM05D000810 ORTHO05D001064 4.4e-08 62.8 223 27.4
TAR636G1527 Trochodendron aralioides HOM05D000810 ORTHO05D001064 1.3e-07 61.2 208 28.8
Hma1.2p1_0751F.1_g212745 Hydrangea macrophylla HOM05D000810 ORTHO05D001064 1.7e-07 60.8 205 32.2
Hma1.2p1_0751F.1_g212750 Hydrangea macrophylla HOM05D000810 ORTHO05D001064 1.7e-07 60.8 205 32.2
Medtr1g094630 Medicago truncatula HOM05D000810 ORTHO05D001064 1.7e-07 60.8 327 24.8
Glyma.20G181600 Glycine max HOM05D000810 ORTHO05D001064 3.7e-07 59.7 184 30.4
ATR0680G177 Amborella trichopoda HOM05D000810 ORTHO05D001064 8.2e-07 58.5 162 31.5
Lj2C18G5 Lonicera japonica HOM05D000810 ORTHO05D001064 1.1e-06 58.2 160 32.5
TAR369G0784 Trochodendron aralioides HOM05D000810 ORTHO05D001064 1.1e-06 58.2 203 27.1
vmacro07126 Vaccinium macrocarpon HOM05D000810 ORTHO05D001064 1.8e-06 57.4 94 40.4
MBI14_g08033_MAGBIO Magnolia biondii HOM05D000810 ORTHO05D001064 3.1e-06 56.6 169 28.4
Psat6g182040 Pisum sativum HOM05D000810 ORTHO05D001064 7.0e-06 55.5 198 26.8
Lj5g0012554 Lotus japonicus HOM05D000810 ORTHO05D001064 9.1e-06 55.1 329 24.9


User provided reference genes

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