Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc52.96 Carica papaya HOM05D000319 ORTHO05D005616 9.3e-147 523.5 255 100.0
TWI18G1113 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 4.5e-133 478.0 255 90.6
MSTRG.18283 Avicennia marina HOM05D000319 ORTHO05D005616 2.2e-132 475.7 255 89.8
CSS0020063 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 1.4e-131 473.0 255 89.0
COL.COLO4_06081 Corchorus olitorius HOM05D000319 ORTHO05D005616 1.4e-131 473.0 255 89.8
GSVIVG01000718001 Vitis vinifera HOM05D000319 ORTHO05D005616 2.5e-131 472.2 255 88.6
THA.LOC104825981 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 3.2e-131 471.9 256 89.5
Atru.chr5.1559 Acer truncatum HOM05D000319 ORTHO05D005616 5.5e-131 471.1 255 90.2
Dinv34565 Davidia involucrata HOM05D000319 ORTHO05D005616 7.1e-131 470.7 255 88.2
Duzib138G1611 Durio zibethinus HOM05D000319 ORTHO05D005616 7.1e-131 470.7 255 89.8
Duzib211G0655 Durio zibethinus HOM05D000319 ORTHO05D005616 7.1e-131 470.7 255 89.0
THA.LOC104801256 Tarenaya hassleriana HOM05D000319 ORTHO05D005616 7.1e-131 470.7 257 89.5
Thecc.01G267900 Theobroma cacao HOM05D000319 ORTHO05D005616 7.1e-131 470.7 255 89.4
RcHm_v2.0_Chr2g0134501 Rosa chinensis HOM05D000319 ORTHO05D005616 9.3e-131 470.3 255 89.4
Nn1g02549 Nelumbo nucifera HOM05D000319 ORTHO05D005616 1.2e-130 469.9 253 88.9
Potri.002G045200 Populus trichocarpa HOM05D000319 ORTHO05D005616 1.2e-130 469.9 255 88.2
Ca_01047_v3 Cicer arietinum L. HOM05D000319 ORTHO05D005616 1.6e-130 469.5 255 88.6
Prupe.3G092100 Prunus persica HOM05D000319 ORTHO05D005616 1.6e-130 469.5 255 89.4
SGA_v2.0_scaffold1G00552 Striga asiatica HOM05D000319 ORTHO05D005616 1.6e-130 469.5 255 89.0
Eucgr.K03315 Eucalyptus grandis HOM05D000319 ORTHO05D005616 2.1e-130 469.2 255 90.6
arahy.Tifrunner.gnm1.ann1.69SMRU Arachis hypogaea HOM05D000319 ORTHO05D005616 2.7e-130 468.8 255 89.4
TWI75G0800 Tripterygium wilfordii HOM05D000319 ORTHO05D005616 3.5e-130 468.4 255 89.0
Ciclev10021811m.g Citrus clementina HOM05D000319 ORTHO05D005616 6.0e-130 467.6 255 88.2
MD17G1215900 Malus domestica HOM05D000319 ORTHO05D005616 7.9e-130 467.2 255 88.6
PGR044G1796 Punica granatum HOM05D000319 ORTHO05D005616 7.9e-130 467.2 256 87.9
BcaB01g02475 Brassica carinata HOM05D000319 ORTHO05D005616 1.3e-129 466.5 256 89.5
MD17G1216000 Malus domestica HOM05D000319 ORTHO05D005616 1.3e-129 466.5 255 88.6
Rhsim13G0030900 Rhododendron simsii HOM05D000319 ORTHO05D005616 1.3e-129 466.5 255 87.8
Thhalv10028900m.g Eutrema salsugineum HOM05D000319 ORTHO05D005616 1.8e-129 466.1 256 89.8
Migut.D00371 Erythranthe guttata HOM05D000319 ORTHO05D005616 2.3e-129 465.7 255 87.1
Sp6g02490 Schrenkiella parvula HOM05D000319 ORTHO05D005616 3.0e-129 465.3 256 89.1
Ah.11g049990 Amaranthus hybridus HOM05D000319 ORTHO05D005616 3.9e-129 464.9 255 86.7
Lsat_1_v5_gn_9_8201 Lactuca sativa HOM05D000319 ORTHO05D005616 8.7e-129 463.8 255 86.7
Gohir.D08G055800 Gossypium hirsutum HOM05D000319 ORTHO05D005616 1.1e-128 463.4 255 87.1
Actinidia19981 Actinidia chinensis HOM05D000319 ORTHO05D005616 1.5e-128 463.0 255 87.1
CANSAT56G1819 Cannabis sativa HOM05D000319 ORTHO05D005616 1.5e-128 463.0 255 88.2
Hma1.2p1_0760F.1_g214240 Hydrangea macrophylla HOM05D000319 ORTHO05D005616 1.5e-128 463.0 256 86.7
Manes.14G005900 Manihot esculenta HOM05D000319 ORTHO05D005616 1.5e-128 463.0 255 88.2
BcaC04g23998 Brassica carinata HOM05D000319 ORTHO05D000903 1.9e-128 462.6 253 89.7
C09p02100 Brassica napus HOM05D000319 ORTHO05D000903 1.9e-128 462.6 253 89.7
Carub.0006s3456 Capsella rubella HOM05D000319 ORTHO05D005616 1.9e-128 462.6 256 88.7
Cfa008743 Carpinus fangiana HOM05D000319 ORTHO05D005616 1.9e-128 462.6 255 88.6
Gorai.004G056700 Gossypium raimondii HOM05D000319 ORTHO05D005616 1.9e-128 462.6 255 86.7
A09p02000 Brassica napus HOM05D000319 ORTHO05D000903 2.5e-128 462.2 253 89.3
Haze_11759 Corylus avellana HOM05D000319 ORTHO05D005616 2.5e-128 462.2 255 88.6
Gohir.A08G045400 Gossypium hirsutum HOM05D000319 ORTHO05D005616 2.5e-128 462.2 255 86.7
HanXRQChr15g0467021 Helianthus annuus HOM05D000319 ORTHO05D005616 2.5e-128 462.2 255 87.1
Manes.01G201800 Manihot esculenta HOM05D000319 ORTHO05D005616 2.5e-128 462.2 255 88.2
Medtr2g104110 Medicago truncatula HOM05D000319 ORTHO05D005616 2.5e-128 462.2 255 88.2
Potri.005G218000 Populus trichocarpa HOM05D000319 ORTHO05D005616 2.5e-128 462.2 255 87.5
A03p30990 Brassica napus HOM05D000319 ORTHO05D000903 3.3e-128 461.8 253 89.3
BolC9t53140H Brassica oleracea HOM05D000319 ORTHO05D005616 3.3e-128 461.8 256 89.1
TPR.G37240 Trifolium pratense HOM05D000319 ORTHO05D005616 3.3e-128 461.8 255 87.8
FvH4_6g29310 Fragaria vesca HOM05D000319 ORTHO05D005616 4.3e-128 461.5 255 88.6
Lj2A1160T39 Lonicera japonica HOM05D000319 ORTHO05D005616 4.3e-128 461.5 255 87.8
Lalb_Chr22g0350801 Lupinus albus HOM05D000319 ORTHO05D005616 4.3e-128 461.5 255 89.0
SalBow4G3161 Salvia bowleyana HOM05D000319 ORTHO05D005616 4.3e-128 461.5 255 87.8
BcaB01g02030 Brassica carinata HOM05D000319 ORTHO05D005616 5.6e-128 461.1 253 88.9
AL6G50470 Arabidopsis lyrata HOM05D000319 ORTHO05D005616 7.4e-128 460.7 256 88.3
Cc01_g18870 Coffea canephora HOM05D000319 ORTHO05D005616 7.4e-128 460.7 255 86.3
CARHR250870 Cardamine hirsuta HOM05D000319 ORTHO05D005616 1.3e-127 459.9 256 88.3
Sed0023498 Sechium edule HOM05D000319 ORTHO05D005616 1.6e-127 459.5 255 87.5
CiPaw.06G060900 Carya illinoinensis HOM05D000319 ORTHO05D005616 2.8e-127 458.8 255 87.5
Actinidia09093 Actinidia chinensis HOM05D000319 ORTHO05D005616 4.8e-127 458.0 255 86.3
CiPaw.05G169400 Carya illinoinensis HOM05D000319 ORTHO05D005616 6.2e-127 457.6 255 87.5
ClCG07G012250 Citrullus lanatus HOM05D000319 ORTHO05D005616 6.2e-127 457.6 255 86.7
BolC3t16066H Brassica oleracea HOM05D000319 ORTHO05D005616 1.1e-126 456.8 255 88.6
Nn3g19503 Nelumbo nucifera HOM05D000319 ORTHO05D005616 1.4e-126 456.4 254 86.2
BraA09t35850Z Brassica rapa HOM05D000319 ORTHO05D000903 1.8e-126 456.1 253 88.5
Sc17g0001020 Simmondsia chinensis HOM05D000319 ORTHO05D005616 2.4e-126 455.7 255 85.9
MELO3C017843.2 Cucumis melo HOM05D000319 ORTHO05D005616 4.0e-126 454.9 255 86.3
AT4G02580 Arabidopsis thaliana HOM05D000319 ORTHO05D005616 5.3e-126 454.5 256 87.1
Aqoxy5G00356 Aquilegia oxysepala HOM05D000319 ORTHO05D005616 6.9e-126 454.1 253 87.0
DCAR_018446 Daucus carota HOM05D000319 ORTHO05D005616 9.0e-126 453.8 255 86.7
EL10Ac5g10471 Beta vulgaris HOM05D000319 ORTHO05D005616 1.2e-125 453.4 255 84.7
PSO210G0711 Papaver somniferum HOM05D000319 ORTHO05D005616 1.2e-125 453.4 256 85.5
Glyma.15G006400 Glycine max HOM05D000319 ORTHO05D005616 1.5e-125 453.0 255 85.1
Glyma.13G367000 Glycine max HOM05D000319 ORTHO05D005616 2.0e-125 452.6 255 84.7
unitig_26.g10148 Utricularia gibba HOM05D000319 ORTHO05D005616 2.0e-125 452.6 255 85.9
BcaC01g06747 Brassica carinata HOM05D000319 ORTHO05D000903 2.6e-125 452.2 252 88.5
C03p37760 Brassica napus HOM05D000319 ORTHO05D005616 2.6e-125 452.2 252 88.5
FAN14G4091 Fragaria x ananassa HOM05D000319 ORTHO05D005616 2.6e-125 452.2 262 85.9
Phvul.005G179400 Phaseolus vulgaris HOM05D000319 ORTHO05D005616 3.4e-125 451.8 255 85.1
BraA03t12276Z Brassica rapa HOM05D000319 ORTHO05D000903 4.5e-125 451.4 253 87.7
PSO832G0193 Papaver somniferum HOM05D000319 ORTHO05D005616 5.8e-125 451.1 256 85.5
CsaV3_4G001900 Cucumis sativus L. HOM05D000319 ORTHO05D005616 1.7e-124 449.5 255 85.1
Nitab4.5_0000187g0170 Nicotiana tabacum HOM05D000319 ORTHO05D005616 2.2e-124 449.1 254 85.4
Nitab4.5_0003053g0020 Nicotiana tabacum HOM05D000319 ORTHO05D005616 2.2e-124 449.1 254 85.4
TAR365G0186 Trochodendron aralioides HOM05D000319 ORTHO05D005616 2.2e-124 449.1 253 86.2
Lj3g0018932 Lotus japonicus HOM05D000319 ORTHO05D005616 2.9e-124 448.7 255 84.3
ECA247G3951 Erigeron canadensis HOM05D000319 ORTHO05D005616 4.9e-124 448.0 256 85.2
Gorai.001G242600 Gossypium raimondii HOM05D000319 ORTHO05D005616 4.9e-124 448.0 255 84.7
Aa31LG5G2210 Aethionema arabicum HOM05D000319 ORTHO05D005616 6.5e-124 447.6 256 85.9
Gohir.A07G208700 Gossypium hirsutum HOM05D000319 ORTHO05D005616 3.2e-123 445.3 255 84.3
AUR62032260 Chenopodium quinoa HOM05D000319 ORTHO05D005616 4.2e-123 444.9 255 83.5
CAN.G1072.4 Capsicum annuum HOM05D000319 ORTHO05D005616 5.5e-123 444.5 254 83.5
CDE06G1797 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 7.1e-123 444.1 257 83.7
AUR62011945 Chenopodium quinoa HOM05D000319 ORTHO05D005616 3.5e-122 441.8 255 83.1
Sabra02G0036300 Salix brachista HOM05D000319 ORTHO05D005616 4.6e-122 441.4 306 73.5
Sopen09g027620 Solanum pennellii HOM05D000319 ORTHO05D005616 7.9e-122 440.7 253 84.2
Gohir.D07G214600 Gossypium hirsutum HOM05D000319 ORTHO05D005616 2.3e-121 439.1 255 83.1
PGSC0003DMG400019303 Solanum tuberosum HOM05D000319 ORTHO05D005616 3.9e-121 438.3 253 83.4
Hund09567 Selenicereus undatus HOM05D000319 ORTHO05D005616 6.7e-121 437.6 255 81.6
Psat5g303080 Pisum sativum HOM05D000319 ORTHO05D005616 8.7e-121 437.2 255 83.9
CDE07G0560 Ceratophyllum demersum HOM05D000319 ORTHO05D005616 2.5e-120 435.6 257 81.7
ATR0665G648 Amborella trichopoda HOM05D000319 ORTHO05D005616 3.7e-119 431.8 257 81.3
FAN09G4049 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.2e-117 426.8 240 87.5
Sed0021269 Sechium edule HOM05D000319 ORTHO05D005616 2.0e-117 426.0 255 82.0
SGA_v2.0_scaffold138G35283 Striga asiatica HOM05D000319 ORTHO05D005616 1.0e-116 423.7 294 74.5
VMungo1080G0987 Vigna mungo HOM05D000319 ORTHO05D005616 2.2e-116 422.5 240 85.8
vmacro02626 Vaccinium macrocarpon HOM05D000319 ORTHO05D005616 3.8e-116 421.8 283 74.9
Os05g0509200 Oryza sativa ssp. japonica HOM05D000319 ORTHO05D005616 4.2e-115 418.3 233 82.4
Zm00001eb292370 Zea mays HOM05D000319 ORTHO05D005616 4.3e-112 408.3 233 80.7
Dinv22483 Davidia involucrata HOM05D000319 ORTHO05D005616 6.3e-111 404.4 219 88.1
HanXRQChr01g0006871 Helianthus annuus HOM05D000319 ORTHO05D005616 5.3e-110 401.4 267 75.3
arahy.Tifrunner.gnm1.ann1.0F4L5T Arachis hypogaea HOM05D000319 ORTHO05D005616 1.2e-109 400.2 255 80.0
AagrBONN_evm.TU.Sc2ySwM_368.222 Anthoceros agrestis HOM05D000319 ORTHO05D005616 9.4e-107 390.6 229 79.9
SMO361G0598 Selaginella moellendorffii HOM05D000319 ORTHO05D005616 1.6e-106 389.8 230 79.6
MBI11_g38515_MAGBIO Magnolia biondii HOM05D000319 ORTHO05D005616 3.6e-106 388.7 260 76.2
Mapoly0103s0061 Marchantia polymorpha HOM05D000319 ORTHO05D005616 3.0e-105 385.6 250 72.0
Pp3c14_11220 Physcomitrium patens HOM05D000319 ORTHO05D005616 1.4e-102 376.7 232 75.9
Sabra05G0167100 Salix brachista HOM05D000319 ORTHO05D005616 5.3e-102 374.8 319 62.7
Pp3c2_9810 Physcomitrium patens HOM05D000319 ORTHO05D005616 1.2e-101 373.6 232 76.3
Pp3c2_9813 Physcomitrium patens HOM05D000319 ORTHO05D005616 1.2e-101 373.6 232 76.3
Duzib133G0192 Durio zibethinus HOM05D000319 ORTHO05D005616 1.5e-99 366.7 255 73.3
HPP92_010274 Vanilla planifolia HOM05D000319 ORTHO05D005616 1.5e-99 366.7 232 76.7
FAN02G2104 Fragaria x ananassa HOM05D000319 ORTHO05D005616 4.7e-98 361.7 240 77.9
HPP92_010249 Vanilla planifolia HOM05D000319 ORTHO05D005616 4.7e-98 361.7 232 77.2
SEGI_22234 Sequoiadendron giganteum HOM05D000319 ORTHO05D005616 3.9e-97 358.6 200 83.5
CBR_g10938 Chara braunii HOM05D000319 ORTHO05D005616 1.1e-96 357.1 240 70.8
CBR_g36360 Chara braunii HOM05D000319 ORTHO05D005616 8.2e-95 350.9 240 69.6
BolC2t09938H Brassica oleracea HOM05D000319 ORTHO05D005616 1.4e-89 333.6 250 70.0
BcaB05g23646 Brassica carinata HOM05D000319 ORTHO05D005616 4.7e-82 308.5 285 61.8
QL03p046056 Quercus lobata HOM05D000319 ORTHO05D005616 6.1e-82 308.1 160 91.9
Oeu058799.1 Olea europaea HOM05D000319 ORTHO05D005616 8.0e-82 307.8 161 91.3
PRCOL_00000415 Prasinoderma coloniale HOM05D000319 ORTHO05D005616 2.0e-80 303.1 251 58.2
Solyc09g065830.4 Solanum lycopersicum HOM05D000319 ORTHO05D005616 3.7e-79 298.9 162 87.0
BcaC03g16149 Brassica carinata HOM05D000319 ORTHO05D005616 1.4e-78 297.0 201 74.6
Lalb_Chr24g0395411 Lupinus albus HOM05D000319 ORTHO05D005616 1.4e-78 297.0 171 86.0
HPP92_010181 Vanilla planifolia HOM05D000319 ORTHO05D005616 1.2e-74 283.9 183 77.6
SGA_v2.0_scaffold580G53039 Striga asiatica HOM05D000319 ORTHO05D005616 5.7e-72 275.0 162 84.6
Cre10.g450400 Chlamydomonas reinhardtii HOM05D000319 ORTHO05D005616 9.2e-70 267.7 232 52.6
FAN05G4646 Fragaria x ananassa HOM05D000319 ORTHO05D005616 1.1e-67 260.8 268 56.7
C02p39270 Brassica napus HOM05D000319 ORTHO05D021913 1.1e-59 234.2 135 83.7
CAN.G2529.1 Capsicum annuum HOM05D000319 ORTHO05D005616 8.1e-58 228.0 117 92.3
Carub.0006s0058 Capsella rubella HOM05D000319 ORTHO05D005616 3.4e-56 222.6 116 93.1
Cfa025181 Carpinus fangiana HOM05D000319 ORTHO05D005616 1.2e-50 204.1 224 44.6
Peaxi162Scf00049g02221 Petunia axillaris HOM05D000319 ORTHO05D005616 5.2e-49 198.7 101 96.0
CSS0010087 Camellia sinensis var. sinensis HOM05D000319 ORTHO05D005616 1.7e-44 183.7 100 89.0
Lj1A57T50 Lonicera japonica HOM05D000319 ORTHO05D005616 1.5e-43 180.6 121 74.4
Oeu002275.1 Olea europaea HOM05D000319 ORTHO05D005616 2.5e-43 179.9 165 60.0
Haze_26296 Corylus avellana HOM05D000319 ORTHO05D005616 1.2e-42 177.6 211 46.9
Oeu058801.1 Olea europaea HOM05D000113 ORTHO05D010194 1.8e-41 173.7 100 82.0
Psat5g267520 Pisum sativum HOM05D000319 ORTHO05D005616 1.3e-39 167.5 83 91.6
Lalb_Chr24g0395401 Lupinus albus HOM05D000319 ORTHO05D005616 1.1e-38 164.5 84 88.1
Gohir.D03G127200 Gossypium hirsutum HOM05D000319 ORTHO05D005616 3.0e-36 156.4 89 83.1
Gorai.007G009700 Gossypium raimondii HOM05D000319 ORTHO05D005616 1.1e-35 154.5 83 86.7
QL03p046047 Quercus lobata HOM05D000319 ORTHO05D005616 1.3e-34 151.0 97 78.4
Gohir.D08G101900 Gossypium hirsutum HOM05D000319 ORTHO05D005616 6.2e-34 148.7 89 79.8
Gorai.004G109900 Gossypium raimondii HOM05D000319 ORTHO05D005616 1.4e-33 147.5 89 78.7
Gohir.D11G034350 Gossypium hirsutum HOM05D000319 ORTHO05D015684 2.4e-33 146.7 77 87.0
Gorai.011G177500 Gossypium raimondii HOM05D000319 ORTHO05D015684 2.0e-32 143.7 89 77.5
Gorai.007G037200 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.4e-30 137.5 81 81.5
Gohir.D02G148240 Gossypium hirsutum HOM05D000319 ORTHO05D015684 2.4e-30 136.7 81 81.5
Psat2g121280 Pisum sativum HOM05D000319 ORTHO05D005616 2.1e-29 133.7 84 79.8
Gorai.008G258400 Gossypium raimondii HOM05D000319 ORTHO05D015684 3.5e-29 132.9 81 79.0
Gohir.A10G159900 Gossypium hirsutum HOM05D000319 ORTHO05D015684 6.0e-29 132.1 75 82.7
Gohir.A12G213400 Gossypium hirsutum HOM05D000319 ORTHO05D015684 6.0e-29 132.1 75 82.7
Gohir.D05G290500 Gossypium hirsutum HOM05D000319 ORTHO05D015684 6.0e-29 132.1 75 82.7
Gohir.D12G241200 Gossypium hirsutum HOM05D000319 ORTHO05D015684 6.0e-29 132.1 75 82.7
Gohir.A02G064600 Gossypium hirsutum HOM05D000319 ORTHO05D015684 2.3e-28 130.2 75 81.3
Gorai.005G095000 Gossypium raimondii HOM05D000319 ORTHO05D015684 8.7e-28 128.3 75 81.3
Gohir.D03G105033 Gossypium hirsutum HOM05D000319 ORTHO05D005616 2.1e-26 123.6 71 81.7
Psat4g011320 Pisum sativum HOM05D000319 ORTHO05D005616 8.1e-26 121.7 82 76.8
Gorai.003G111100 Gossypium raimondii HOM05D000319 ORTHO05D015684 1.8e-25 120.6 76 77.6
GSVIVG01013142001 Vitis vinifera HOM05D000319 ORTHO05D439463 3.9e-12 76.3 55 67.3
Lj1A57T51 Lonicera japonica HOM05D000319 ORTHO05D005616 8.7e-12 75.1 41 85.4
arahy.Tifrunner.gnm1.ann1.52VWXA Arachis hypogaea HOM05D000069 ORTHO05D086405 1.4e-06 57.8 30 90.0


User provided reference genes

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