Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc51.9 Carica papaya HOM05D000181 ORTHO05D007950 1.5e-65 252.7 127 100.0
Thecc.05G267400 Theobroma cacao HOM05D000181 ORTHO05D007950 6.9e-50 200.7 122 79.5
Manes.08G141200 Manihot esculenta HOM05D000181 ORTHO05D007950 2.2e-48 195.7 127 76.4
Ciclev10030569m.g Citrus clementina HOM05D000181 ORTHO05D007950 3.8e-48 194.9 127 73.2
TWI34G0190 Tripterygium wilfordii HOM05D000181 ORTHO05D007950 3.8e-48 194.9 126 74.6
GSVIVG01021791001 Vitis vinifera HOM05D000181 ORTHO05D007950 9.3e-47 190.3 127 75.6
THA.LOC104827282 Tarenaya hassleriana HOM05D000181 ORTHO05D007950 1.2e-46 189.9 126 73.0
MD04G1232400 Malus domestica HOM05D000181 ORTHO05D007950 2.1e-46 189.1 124 75.8
Gohir.D11G255200 Gossypium hirsutum HOM05D000181 ORTHO05D007950 2.7e-46 188.7 122 75.4
Gorai.007G273800 Gossypium raimondii HOM05D000181 ORTHO05D007950 2.7e-46 188.7 122 75.4
CARHR078520 Cardamine hirsuta HOM05D000181 ORTHO05D007950 3.5e-46 188.3 127 74.0
Aa31LG5G14810 Aethionema arabicum HOM05D000181 ORTHO05D007950 4.6e-46 188.0 127 74.0
Carub.0003s0355 Capsella rubella HOM05D000181 ORTHO05D007950 4.6e-46 188.0 127 74.8
Sp3g03230 Schrenkiella parvula HOM05D000181 ORTHO05D007950 6.0e-46 187.6 127 74.0
AL3G14330 Arabidopsis lyrata HOM05D000181 ORTHO05D007950 7.8e-46 187.2 127 74.8
Gohir.A11G245300 Gossypium hirsutum HOM05D000181 ORTHO05D007950 7.8e-46 187.2 122 74.6
Thhalv10019907m.g Eutrema salsugineum HOM05D000181 ORTHO05D007950 1.3e-45 186.4 127 74.0
Potri.013G048700 Populus trichocarpa HOM05D000181 ORTHO05D007950 1.3e-45 186.4 127 73.2
BcaC05g29949 Brassica carinata HOM05D000181 ORTHO05D007950 2.3e-45 185.7 127 73.2
AT3G04340 Arabidopsis thaliana HOM05D000181 ORTHO05D007950 3.9e-45 184.9 127 74.0
Atru.chr2.1070 Acer truncatum HOM05D000181 ORTHO05D007950 6.6e-45 184.1 127 72.4
TAR362G0160 Trochodendron aralioides HOM05D000181 ORTHO05D007950 1.1e-44 183.3 126 73.8
Sabra13G0044800 Salix brachista HOM05D000181 ORTHO05D007950 2.5e-44 182.2 127 70.9
Cfa006380 Carpinus fangiana HOM05D000181 ORTHO05D007950 7.3e-44 180.6 124 74.2
Eucgr.H04217 Eucalyptus grandis HOM05D000181 ORTHO05D007950 1.3e-43 179.9 128 71.9
Nn4g25637 Nelumbo nucifera HOM05D000181 ORTHO05D007950 1.6e-43 179.5 128 73.4
RcHm_v2.0_Chr3g0449311 Rosa chinensis HOM05D000181 ORTHO05D007950 3.6e-43 178.3 122 73.0
CANSAT54G2074 Cannabis sativa HOM05D000181 ORTHO05D007950 4.8e-43 177.9 127 70.1
PSO210G0470 Papaver somniferum HOM05D000181 ORTHO05D007950 6.2e-43 177.6 126 72.2
PGR004G1120 Punica granatum HOM05D000181 ORTHO05D007950 1.1e-42 176.8 127 70.1
Glyma.20G227000 Glycine max HOM05D000181 ORTHO05D007950 1.4e-42 176.4 124 71.0
Dinv11715 Davidia involucrata HOM05D000181 ORTHO05D007950 1.8e-42 176.0 127 71.7
FvH4_6g01550 Fragaria vesca HOM05D000181 ORTHO05D007950 2.4e-42 175.6 122 72.1
FAN14G4262 Fragaria x ananassa HOM05D000181 ORTHO05D007950 2.4e-42 175.6 122 72.1
Prupe.6G352000 Prunus persica HOM05D000181 ORTHO05D007950 2.4e-42 175.6 127 70.1
FAN09G4093 Fragaria x ananassa HOM05D000181 ORTHO05D007950 3.1e-42 175.3 122 72.1
CiPaw.07G071100 Carya illinoinensis HOM05D000181 ORTHO05D007950 6.9e-42 174.1 122 71.3
Lj5g0022962 Lotus japonicus HOM05D000181 ORTHO05D007950 1.2e-41 173.3 117 71.8
AUR62006983 Chenopodium quinoa HOM05D000181 ORTHO05D007950 1.5e-41 172.9 128 71.1
PSO761G0660 Papaver somniferum HOM05D000181 ORTHO05D007950 2.6e-41 172.2 126 70.6
Phvul.L002051 Phaseolus vulgaris HOM05D000181 ORTHO05D007950 2.6e-41 172.2 124 69.4
CSS0011745 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007950 1.7e-40 169.5 127 70.1
AUR62000630 Chenopodium quinoa HOM05D000181 ORTHO05D007950 2.9e-40 168.7 128 70.3
Haze_04399 Corylus avellana HOM05D000181 ORTHO05D007950 3.8e-40 168.3 158 58.9
FAN14G0398 Fragaria x ananassa HOM05D000181 ORTHO05D007950 3.8e-40 168.3 131 67.2
Lalb_Chr06g0168211 Lupinus albus HOM05D000181 ORTHO05D007950 3.8e-40 168.3 124 68.5
VMungo0720G1286 Vigna mungo HOM05D000181 ORTHO05D007950 6.4e-40 167.5 124 68.5
TPR.G26633 Trifolium pratense HOM05D000181 ORTHO05D007950 8.4e-40 167.2 124 67.7
Ca_10026_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007950 1.1e-39 166.8 124 68.5
Aqoxy2G02791 Aquilegia oxysepala HOM05D000181 ORTHO05D007950 1.4e-39 166.4 125 69.6
arahy.Tifrunner.gnm1.ann1.F7IFNT Arachis hypogaea HOM05D000181 ORTHO05D007950 1.4e-39 166.4 119 70.6
EL10Ac4g09755 Beta vulgaris HOM05D000181 ORTHO05D007950 1.4e-39 166.4 128 68.8
MELO3C010145.2 Cucumis melo HOM05D000181 ORTHO05D007950 1.4e-39 166.4 122 69.7
ECA246G2912 Erigeron canadensis HOM05D000181 ORTHO05D007950 1.9e-39 166.0 127 63.8
Sed0008679 Sechium edule HOM05D000181 ORTHO05D007950 1.9e-39 166.0 127 66.9
arahy.Tifrunner.gnm1.ann1.F17Y7U Arachis hypogaea HOM05D000181 ORTHO05D007950 2.4e-39 165.6 119 70.6
ClCG03G010040 Citrullus lanatus HOM05D000181 ORTHO05D007950 7.1e-39 164.1 122 68.0
Duzib177G0506 Durio zibethinus HOM05D000181 ORTHO05D007950 7.1e-39 164.1 104 76.0
CsaV3_1G045170 Cucumis sativus L. HOM05D000181 ORTHO05D007950 1.2e-38 163.3 121 68.6
MBI19_g37398_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D007950 2.1e-38 162.5 128 69.5
Psat6g144520 Pisum sativum HOM05D000181 ORTHO05D007950 2.7e-38 162.2 124 66.1
DCAR_030391 Daucus carota HOM05D000181 ORTHO05D007950 3.5e-38 161.8 127 65.4
Migut.E00692 Erythranthe guttata HOM05D000181 ORTHO05D007950 4.6e-38 161.4 129 66.7
Lsat_1_v5_gn_3_35721 Lactuca sativa HOM05D000181 ORTHO05D007950 4.6e-38 161.4 126 65.1
A05p43110 Brassica napus HOM05D000181 ORTHO05D007950 6.0e-38 161.0 104 75.0
C05p62850 Brassica napus HOM05D000181 ORTHO05D007950 6.0e-38 161.0 104 75.0
BolC5t34940H Brassica oleracea HOM05D000181 ORTHO05D007950 6.0e-38 161.0 104 75.0
BraA05t23054Z Brassica rapa HOM05D000181 ORTHO05D007950 6.0e-38 161.0 104 75.0
Sc16g0009800 Simmondsia chinensis HOM05D000181 ORTHO05D007950 1.0e-37 160.2 125 65.6
Actinidia04309 Actinidia chinensis HOM05D000181 ORTHO05D007950 1.8e-37 159.5 121 66.9
SalBow6G6839 Salvia bowleyana HOM05D000181 ORTHO05D007950 1.8e-37 159.5 127 65.4
Solyc02g032970.4 Solanum lycopersicum HOM05D000181 ORTHO05D007950 1.8e-37 159.5 128 64.8
Sopen02g011360 Solanum pennellii HOM05D000181 ORTHO05D007950 1.8e-37 159.5 128 64.8
HanXRQChr15g0472161 Helianthus annuus HOM05D000181 ORTHO05D007950 6.7e-37 157.5 127 63.0
Medtr1g080430 Medicago truncatula HOM05D000181 ORTHO05D007950 1.5e-36 156.4 124 64.5
CAN.G1284.1 Capsicum annuum HOM05D000181 ORTHO05D007950 2.5e-36 155.6 128 64.1
MSTRG.2063 Avicennia marina HOM05D000181 ORTHO05D007950 1.6e-35 152.9 127 62.2
BcaC05g30203 Brassica carinata HOM05D000181 ORTHO05D007950 2.2e-32 142.5 89 77.5
SGA_v2.0_scaffold8G04660 Striga asiatica HOM05D000181 ORTHO05D007950 2.1e-30 136.0 101 64.4
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 1.0e-29 133.7 97 68.0
ATR0064G121 Amborella trichopoda HOM05D000181 ORTHO05D007950 1.3e-29 133.3 99 65.7
Thhalv10022034m.g Eutrema salsugineum HOM05D000181 ORTHO05D007950 2.3e-29 132.5 101 70.3
CDE12G0221 Ceratophyllum demersum HOM05D000181 ORTHO05D007950 8.7e-29 130.6 111 57.7
FAN02G1064 Fragaria x ananassa HOM05D000181 ORTHO05D007950 8.7e-29 130.6 100 67.0
Hma1.2p1_1351F.1_g277420 Hydrangea macrophylla HOM05D000181 ORTHO05D007950 1.3e-27 126.7 77 79.2
Lj6A720T61 Lonicera japonica HOM05D000181 ORTHO05D007950 1.2e-25 120.2 116 54.3
Peaxi162Scf00363g00728 Petunia axillaris HOM05D000181 ORTHO05D007950 5.8e-25 117.9 77 76.6
Nitab4.5_0000501g0090 Nicotiana tabacum HOM05D000181 ORTHO05D007950 1.7e-24 116.3 77 74.0
Nitab4.5_0002192g0060 Nicotiana tabacum HOM05D000181 ORTHO05D007950 8.4e-24 114.0 77 74.0
AagrBONN_evm.TU.Sc2ySwM_368.2554 Anthoceros agrestis HOM05D000181 ORTHO05D007950 5.1e-21 104.8 116 45.7
Mapoly0016s0072 Marchantia polymorpha HOM05D000181 ORTHO05D007950 1.6e-19 99.8 127 41.7
Thhalv10022255m.g Eutrema salsugineum HOM05D000181 ORTHO05D007950 8.2e-19 97.4 87 66.7
Pp3c13_19380 Physcomitrium patens HOM05D000181 ORTHO05D007950 4.1e-18 95.1 125 37.6
Pp3c3_13130 Physcomitrium patens HOM05D000181 ORTHO05D007950 1.5e-17 93.2 125 36.8
Glyma.10G164800 Glycine max HOM05D000181 ORTHO05D007950 2.3e-13 79.3 42 85.7
CBR_g17930 Chara braunii HOM05D000181 ORTHO05D007950 9.1e-10 67.4 110 31.8


User provided reference genes

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