Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc5.304 Carica papaya HOM05D004087 ORTHO05D004787 3.7e-95 351.7 197 100.0
Manes.05G094600 Manihot esculenta HOM05D004087 ORTHO05D004787 6.9e-49 198.0 200 61.0
CiPaw.06G078300 Carya illinoinensis HOM05D004087 ORTHO05D004787 9.0e-49 197.6 201 60.2
Gohir.D04G136500 Gossypium hirsutum HOM05D004087 ORTHO05D004787 2.0e-48 196.4 183 59.6
Gorai.012G120300 Gossypium raimondii HOM05D004087 ORTHO05D004787 2.0e-48 196.4 183 59.6
Glyma.01G039100 Glycine max HOM05D004087 ORTHO05D004787 5.1e-44 181.8 192 58.3
COL.COLO4_36242 Corchorus olitorius HOM05D004087 ORTHO05D004787 7.4e-43 177.9 137 73.0
GSVIVG01020122001 Vitis vinifera HOM05D004087 ORTHO05D004787 6.2e-42 174.9 179 59.2
Ciclev10032809m.g Citrus clementina HOM05D004087 ORTHO05D004787 3.1e-41 172.6 191 57.6
Phvul.002G079300 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 4.0e-41 172.2 191 57.1
Potri.008G190900 Populus trichocarpa HOM05D004087 ORTHO05D004787 4.0e-41 172.2 207 57.5
Eucgr.B02582 Eucalyptus grandis HOM05D004087 ORTHO05D004787 1.5e-40 170.2 197 54.3
Lalb_Chr05g0217411 Lupinus albus HOM05D004087 ORTHO05D004787 2.0e-40 169.9 192 53.6
TPR.G26706 Trifolium pratense HOM05D004087 ORTHO05D004787 7.6e-40 167.9 196 54.6
TAR622G0570 Trochodendron aralioides HOM05D004087 ORTHO05D004787 3.8e-39 165.6 144 63.9
VMungo1215G1106 Vigna mungo HOM05D004087 ORTHO05D004787 3.8e-39 165.6 189 54.0
Sabra08G0144800 Salix brachista HOM05D004087 ORTHO05D004787 8.4e-39 164.5 144 66.7
Lj2g0011291 Lotus japonicus HOM05D004087 ORTHO05D004787 1.1e-38 164.1 191 56.0
Hma1.2p1_0289F.1_g114450 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 2.5e-38 162.9 136 66.2
Medtr5g037230 Medicago truncatula HOM05D004087 ORTHO05D004787 4.2e-38 162.2 140 65.0
THA.LOC104822080 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 1.6e-37 160.2 202 53.0
Cfa009049 Carpinus fangiana HOM05D004087 ORTHO05D004787 2.1e-37 159.8 195 55.9
Haze_12080 Corylus avellana HOM05D004087 ORTHO05D004787 2.7e-37 159.5 195 55.9
Actinidia01168 Actinidia chinensis HOM05D004087 ORTHO05D004787 1.0e-36 157.5 200 51.0
Glyma.02G025600 Glycine max HOM05D004087 ORTHO05D004787 2.3e-36 156.4 191 52.9
Nitab4.5_0000710g0070 Nicotiana tabacum HOM05D004087 ORTHO05D004787 3.0e-36 156.0 203 51.2
Solyc04g005120.3 Solanum lycopersicum HOM05D004087 ORTHO05D004787 3.9e-36 155.6 181 50.8
Sopen04g001140 Solanum pennellii HOM05D004087 ORTHO05D004787 1.9e-35 153.3 178 51.7
Peaxi162Scf00187g00617 Petunia axillaris HOM05D004087 ORTHO05D004787 2.5e-35 152.9 114 70.2
CAN.G300.5 Capsicum annuum HOM05D004087 ORTHO05D004787 4.3e-35 152.1 202 50.0
MBI01_g41231_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 4.1e-33 145.6 141 60.3
Psat2g117160 Pisum sativum HOM05D004087 ORTHO05D004787 6.9e-33 144.8 121 66.9
Aqoxy3G03190 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 2.0e-32 143.3 137 59.1
PGR119G1273 Punica granatum HOM05D004087 ORTHO05D004787 2.0e-32 143.3 106 71.7
Atru.chr11.1891 Acer truncatum HOM05D004087 ORTHO05D004787 2.6e-32 142.9 121 66.1
arahy.Tifrunner.gnm1.ann1.F53DZL Arachis hypogaea HOM05D004087 ORTHO05D004787 3.4e-32 142.5 192 49.5
arahy.Tifrunner.gnm1.ann1.0DC02M Arachis hypogaea HOM05D004087 ORTHO05D004787 4.5e-32 142.1 192 49.0
Rhsim12G0127500 Rhododendron simsii HOM05D004087 ORTHO05D004787 2.9e-31 139.4 201 48.8
PSO591G0142 Papaver somniferum HOM05D004087 ORTHO05D004787 1.4e-30 137.1 104 68.3
Duzib268G0252 Durio zibethinus HOM05D004087 ORTHO05D004787 2.5e-30 136.3 136 61.8
BcaC08g46444 Brassica carinata HOM05D004087 ORTHO05D004787 5.5e-30 135.2 114 66.7
BolC6t39453H Brassica oleracea HOM05D004087 ORTHO05D004787 5.5e-30 135.2 114 66.7
PSO832G0995 Papaver somniferum HOM05D004087 ORTHO05D004787 1.6e-29 133.7 104 66.3
Thhalv10019201m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 1.8e-28 130.2 91 75.8
AL2G29180 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 3.0e-28 129.4 91 75.8
AT1G69935 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 8.8e-28 127.9 91 74.7
BcaB03g14773 Brassica carinata HOM05D004087 ORTHO05D004787 8.8e-28 127.9 115 63.5
Dinv24938 Davidia involucrata HOM05D004087 ORTHO05D004787 1.1e-27 127.5 95 71.6
Sp5g25060 Schrenkiella parvula HOM05D004087 ORTHO05D004787 2.5e-27 126.3 91 74.7
BraA07t31211Z Brassica rapa HOM05D004087 ORTHO05D004787 3.3e-27 125.9 110 65.5
CARHR063040 Cardamine hirsuta HOM05D004087 ORTHO05D004787 3.3e-27 125.9 91 72.5
A07p36390 Brassica napus HOM05D004087 ORTHO05D004787 4.3e-27 125.6 93 72.0
C06p43810 Brassica napus HOM05D004087 ORTHO05D004787 7.4e-27 124.8 118 61.9
Carub.0002s1665 Capsella rubella HOM05D004087 ORTHO05D004787 9.7e-27 124.4 90 74.4
Nn1g03866 Nelumbo nucifera HOM05D004087 ORTHO05D004787 1.5e-24 117.1 209 41.6
Glyma.01G241400 Glycine max HOM05D004087 ORTHO05D004787 2.9e-23 112.8 120 53.3
PGR042G2373 Punica granatum HOM05D004087 ORTHO05D004787 1.9e-22 110.2 122 48.4
Ca_28186_v3 Cicer arietinum L. HOM05D004087 ORTHO05D004787 4.2e-22 109.0 189 42.3
Aqoxy6G02440 Aquilegia oxysepala HOM05D004087 ORTHO05D004787 2.1e-21 106.7 104 51.0
Gohir.A04G096700 Gossypium hirsutum HOM05D004087 ORTHO05D004787 2.7e-21 106.3 116 51.7
FvH4_2g03150 Fragaria vesca HOM05D004087 ORTHO05D004787 3.6e-21 105.9 105 55.2
FAN15G0324 Fragaria x ananassa HOM05D004087 ORTHO05D004787 3.6e-21 105.9 105 55.2
FAN20G2318 Fragaria x ananassa HOM05D004087 ORTHO05D004787 3.6e-21 105.9 105 55.2
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla HOM05D004087 ORTHO05D004787 3.6e-21 105.9 112 50.0
Eucgr.G01187 Eucalyptus grandis HOM05D004087 ORTHO05D004787 4.7e-21 105.5 99 51.5
FAN27G0771 Fragaria x ananassa HOM05D004087 ORTHO05D004787 6.1e-21 105.1 105 54.3
Sc05g0005570 Simmondsia chinensis HOM05D004087 ORTHO05D004787 6.1e-21 105.1 89 57.3
GSVIVG01037047001 Vitis vinifera HOM05D004087 ORTHO05D004787 6.1e-21 105.1 115 51.3
QL03p066700 Quercus lobata HOM05D004087 ORTHO05D004787 7.9e-21 104.8 191 41.9
Atru.chr5.2274 Acer truncatum HOM05D004087 ORTHO05D004787 1.0e-20 104.4 89 59.6
Manes.10G087100 Manihot esculenta HOM05D004087 ORTHO05D004787 1.0e-20 104.4 89 58.4
TAR628G1056 Trochodendron aralioides HOM05D000194 ORTHO05D000069 1.0e-20 104.4 111 51.4
Potri.001G289600 Populus trichocarpa HOM05D004087 ORTHO05D004787 1.4e-20 104.0 90 58.9
CiPaw.05G021000 Carya illinoinensis HOM05D004087 ORTHO05D004787 1.8e-20 103.6 87 58.6
FAN24G1045 Fragaria x ananassa HOM05D004087 ORTHO05D004787 1.8e-20 103.6 107 53.3
Carub.0007s0665 Capsella rubella HOM05D004087 ORTHO05D004787 2.3e-20 103.2 101 55.4
Thecc.02G120300 Theobroma cacao HOM05D004087 ORTHO05D004787 2.3e-20 103.2 89 58.4
Ah.01g007120 Amaranthus hybridus HOM05D004087 ORTHO05D004787 3.0e-20 102.8 154 46.1
COL.COLO4_32481 Corchorus olitorius HOM05D004087 ORTHO05D004787 3.0e-20 102.8 113 50.4
QL11p029242 Quercus lobata HOM05D004087 ORTHO05D004787 3.0e-20 102.8 87 59.8
Cc02_g20080 Coffea canephora HOM05D004087 ORTHO05D004787 3.9e-20 102.4 87 58.6
CDE04G2047 Ceratophyllum demersum HOM05D004087 ORTHO05D004787 5.1e-20 102.1 142 43.7
PSO017G3065 Papaver somniferum HOM05D004087 ORTHO05D004787 5.1e-20 102.1 116 45.7
Hund06503 Selenicereus undatus HOM05D004087 ORTHO05D004787 5.1e-20 102.1 209 36.4
ATR0739G081 Amborella trichopoda HOM05D004087 ORTHO05D004787 6.7e-20 101.7 114 49.1
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 6.7e-20 101.7 91 56.0
Nn5g30675 Nelumbo nucifera HOM05D004087 ORTHO05D004787 6.7e-20 101.7 89 56.2
AL7G17680 Arabidopsis lyrata HOM05D004087 ORTHO05D004787 8.8e-20 101.3 89 57.3
AT4G33780 Arabidopsis thaliana HOM05D004087 ORTHO05D004787 8.8e-20 101.3 89 57.3
CARHR241870 Cardamine hirsuta HOM05D004087 ORTHO05D004787 8.8e-20 101.3 89 57.3
Oeu028917.1 Olea europaea HOM05D004087 ORTHO05D004787 8.8e-20 101.3 89 57.3
CDE06G2321 Ceratophyllum demersum HOM05D001904 ORTHO05D001854 1.1e-19 100.9 117 46.2
Prupe.8G150800 Prunus persica HOM05D004087 ORTHO05D004787 1.1e-19 100.9 89 56.2
Cfa004696 Carpinus fangiana HOM05D004087 ORTHO05D004787 1.5e-19 100.5 85 60.0
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 1.5e-19 100.5 175 40.0
BcaC09g52189 Brassica carinata HOM05D000477 ORTHO05D000338 2.0e-19 100.1 89 57.3
BraA01t00439Z Brassica rapa HOM05D004087 ORTHO05D004787 2.0e-19 100.1 87 58.6
Hund06504 Selenicereus undatus HOM05D004087 ORTHO05D004787 2.0e-19 100.1 209 35.9
Actinidia00355 Actinidia chinensis HOM05D004087 ORTHO05D004787 2.6e-19 99.8 87 55.2
ECA236G0105 Erigeron canadensis HOM05D004087 ORTHO05D004787 2.6e-19 99.8 106 52.8
HanXRQChr17g0551501 Helianthus annuus HOM05D004087 ORTHO05D004787 2.6e-19 99.8 111 50.5
BcaNung02921 Brassica carinata HOM05D004087 ORTHO05D004787 3.3e-19 99.4 87 58.6
A03p62320 Brassica napus HOM05D004087 ORTHO05D004787 3.3e-19 99.4 87 58.6
BolC7t46432H Brassica oleracea HOM05D004087 ORTHO05D004787 3.3e-19 99.4 87 58.6
BraA03t15307Z Brassica rapa HOM05D004087 ORTHO05D004787 3.3e-19 99.4 87 58.6
Dinv09536 Davidia involucrata HOM05D004087 ORTHO05D004787 3.3e-19 99.4 89 53.9
Sp7g31520 Schrenkiella parvula HOM05D004087 ORTHO05D004787 3.3e-19 99.4 184 37.5
CSS0031122 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 4.4e-19 99.0 87 54.0
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 4.4e-19 99.0 175 39.4
RcHm_v2.0_Chr6g0248281 Rosa chinensis HOM05D004087 ORTHO05D004787 4.4e-19 99.0 203 37.4
TWI59G0284 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 4.4e-19 99.0 106 53.8
CsaV3_7G007690 Cucumis sativus L. HOM05D004087 ORTHO05D004787 5.7e-19 98.6 89 53.9
Duzib132G0587 Durio zibethinus HOM05D004087 ORTHO05D004787 7.4e-19 98.2 136 42.6
PSO170G3120 Papaver somniferum HOM05D004087 ORTHO05D004787 7.4e-19 98.2 102 50.0
THA.LOC104807209 Tarenaya hassleriana HOM05D004087 ORTHO05D004787 7.4e-19 98.2 124 46.8
BcaNung04326 Brassica carinata HOM05D004087 ORTHO05D004787 9.7e-19 97.8 86 58.1
BcaNung04672 Brassica carinata HOM05D004087 ORTHO05D004787 9.7e-19 97.8 189 37.6
ClCG02G007130 Citrullus lanatus HOM05D004087 ORTHO05D004787 1.3e-18 97.4 89 53.9
Aa31sc355G20 Aethionema arabicum HOM05D004087 ORTHO05D004787 1.7e-18 97.1 185 37.8
CANSAT25G1673 Cannabis sativa HOM05D004087 ORTHO05D004787 1.7e-18 97.1 145 38.6
Migut.B00471 Erythranthe guttata HOM05D004087 ORTHO05D004787 1.7e-18 97.1 87 55.2
Ciclev10029333m.g Citrus clementina HOM05D004087 ORTHO05D004787 2.2e-18 96.7 128 43.0
Lsat_1_v5_gn_7_84781 Lactuca sativa HOM05D004087 ORTHO05D004787 2.8e-18 96.3 116 48.3
Phvul.002G050600 Phaseolus vulgaris HOM05D004087 ORTHO05D004787 2.8e-18 96.3 111 48.6
Sed0019763 Sechium edule HOM05D004087 ORTHO05D004787 2.8e-18 96.3 102 52.0
Solyc01g106810.4 Solanum lycopersicum HOM05D004087 ORTHO05D004787 2.8e-18 96.3 89 51.7
Sopen01g049120 Solanum pennellii HOM05D004087 ORTHO05D004787 2.8e-18 96.3 89 51.7
PGSC0003DMG400001914 Solanum tuberosum HOM05D000067 ORTHO05D000097 2.8e-18 96.3 147 42.9
Thhalv10026262m.g Eutrema salsugineum HOM05D004087 ORTHO05D004787 3.7e-18 95.9 182 37.9
Peaxi162Scf00016g03121 Petunia axillaris HOM05D004087 ORTHO05D004787 4.8e-18 95.5 88 53.4
C01p04920 Brassica napus HOM05D004087 ORTHO05D004787 6.3e-18 95.1 184 36.4
BolC1t00476H Brassica oleracea HOM05D004087 ORTHO05D004787 6.3e-18 95.1 184 36.4
PGSC0003DMG400025835 Solanum tuberosum HOM05D004087 ORTHO05D004787 1.4e-17 94.0 87 51.7
C07p59880 Brassica napus HOM05D004087 ORTHO05D004787 1.8e-17 93.6 184 37.5
MBI16_g37623_MAGBIO Magnolia biondii HOM05D004087 ORTHO05D004787 1.8e-17 93.6 85 57.6
Nitab4.5_0000772g0090 Nicotiana tabacum HOM05D004087 ORTHO05D004787 1.8e-17 93.6 87 51.7
Zm00001eb009500 Zea mays HOM05D004087 ORTHO05D004787 1.5e-16 90.5 87 49.4
Sabra16G0181200 Salix brachista HOM05D004087 ORTHO05D004787 3.5e-16 89.4 113 46.0
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 4.5e-16 89.0 91 52.7
vmacro16306 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 8.5e-15 84.7 74 63.5
BcaC03g14363 Brassica carinata HOM05D004087 ORTHO05D004787 1.9e-14 83.6 87 54.0
MD05G1106700 Malus domestica HOM05D004087 ORTHO05D004787 1.9e-14 83.6 98 45.9
Nitab4.5_0009103g0030 Nicotiana tabacum HOM05D004087 ORTHO05D004787 4.2e-14 82.4 106 43.4
TWI36G1524 Tripterygium wilfordii HOM05D004087 ORTHO05D004787 4.2e-14 82.4 91 56.0
BolC2t07908H Brassica oleracea HOM05D004087 ORTHO05D004787 7.2e-14 81.6 72 59.7
AagrBONN_evm.TU.Sc2ySwM_344.3821 Anthoceros agrestis HOM05D004087 ORTHO05D004787 3.9e-12 75.9 99 42.4
VMungo1215G2093 Vigna mungo HOM05D004087 ORTHO05D004787 3.9e-12 75.9 82 54.9
DCAR_021942 Daucus carota HOM05D004087 ORTHO05D004787 5.2e-12 75.5 131 39.7
SalBow6G0931 Salvia bowleyana HOM05D004087 ORTHO05D004787 8.8e-12 74.7 73 50.7
SGA_v2.0_scaffold32G12983 Striga asiatica HOM05D004087 ORTHO05D004787 2.0e-11 73.6 69 53.6
EL10Ac9g22175 Beta vulgaris HOM05D004087 ORTHO05D004787 9.7e-11 71.2 180 33.3
C02p17780 Brassica napus HOM05D004087 ORTHO05D004787 1.7e-10 70.5 71 53.5
Gohir.A13G047950 Gossypium hirsutum HOM05D004087 ORTHO05D004787 2.2e-10 70.1 70 51.4
MD10G1111500 Malus domestica HOM05D004087 ORTHO05D004787 2.8e-10 69.7 68 55.9
A01p04540 Brassica napus HOM05D004087 ORTHO05D004787 3.7e-10 69.3 60 61.7
MELO3C018531.2 Cucumis melo HOM05D004087 ORTHO05D004787 5.3e-09 65.5 60 53.3
Mapoly0011s0173 Marchantia polymorpha HOM05D004087 ORTHO05D004787 5.3e-09 65.5 115 34.8
Nitab4.5_0013199g0010 Nicotiana tabacum HOM05D004087 ORTHO05D004787 2.0e-08 63.5 145 35.9
unitig_0.g632 Utricularia gibba HOM05D004087 ORTHO05D004787 1.0e-07 61.2 60 51.7
vmacro01944 Vaccinium macrocarpon HOM05D004087 ORTHO05D004787 3.8e-07 59.3 51 52.9
CSS0038746 Camellia sinensis var. sinensis HOM05D004087 ORTHO05D004787 1.9e-06 57.0 131 35.9


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