Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc47.18 Carica papaya HOM05D004020 ORTHO05D004735 1.2e-42 176.0 87 100.0
Gohir.D05G087200 Gossypium hirsutum HOM05D004020 ORTHO05D004735 1.4e-38 162.5 82 95.1
Gorai.009G089000 Gossypium raimondii HOM05D004020 ORTHO05D004735 1.4e-38 162.5 82 95.1
Atru.chr3.3492 Acer truncatum HOM05D004020 ORTHO05D004735 2.4e-38 161.8 85 90.6
Thecc.09G295800 Theobroma cacao HOM05D004020 ORTHO05D004735 2.4e-38 161.8 82 93.9
COL.COLO4_19229 Corchorus olitorius HOM05D004020 ORTHO05D004735 4.1e-38 161.0 82 93.9
Gohir.A07G106066 Gossypium hirsutum HOM05D004020 ORTHO05D004735 4.1e-38 161.0 82 93.9
Gohir.A05G084400 Gossypium hirsutum HOM05D004020 ORTHO05D004735 5.4e-38 160.6 82 93.9
Nn2g13902 Nelumbo nucifera HOM05D004020 ORTHO05D004735 9.2e-38 159.8 83 91.6
Manes.11G154000 Manihot esculenta HOM05D004020 ORTHO05D004735 1.2e-37 159.5 82 90.2
Phvul.011G088000 Phaseolus vulgaris HOM05D004020 ORTHO05D004735 1.2e-37 159.5 82 90.2
Potri.009G002900 Populus trichocarpa HOM05D004020 ORTHO05D004735 1.6e-37 159.1 82 91.5
Ciclev10027713m.g Citrus clementina HOM05D004020 ORTHO05D004735 2.0e-37 158.7 87 86.2
Sed0021294 Sechium edule HOM05D004020 ORTHO05D004735 2.0e-37 158.7 83 90.4
arahy.Tifrunner.gnm1.ann1.PN7A9Z Arachis hypogaea HOM05D004020 ORTHO05D004735 2.7e-37 158.3 82 91.5
Glyma.12G083200 Glycine max HOM05D004020 ORTHO05D004735 2.7e-37 158.3 82 89.0
Lj2A1002G14 Lonicera japonica HOM05D004020 ORTHO05D004735 2.7e-37 158.3 85 88.2
Lj2C1000T6 Lonicera japonica HOM05D004020 ORTHO05D004735 2.7e-37 158.3 85 88.2
Gohir.D07G110000 Gossypium hirsutum HOM05D004020 ORTHO05D004735 3.5e-37 157.9 82 91.5
HanXRQChr14g0451831 Helianthus annuus HOM05D004020 ORTHO05D004735 3.5e-37 157.9 83 90.4
Lj3g0000902 Lotus japonicus HOM05D004020 ORTHO05D004735 4.6e-37 157.5 82 89.0
TAR633G0695 Trochodendron aralioides HOM05D004020 ORTHO05D004735 4.6e-37 157.5 83 88.0
Actinidia24157 Actinidia chinensis HOM05D004020 ORTHO05D004735 6.0e-37 157.1 84 89.3
CSS0033419 Camellia sinensis var. sinensis HOM05D004020 ORTHO05D004735 6.0e-37 157.1 85 88.2
Glyma.11G191100 Glycine max HOM05D004020 ORTHO05D004735 6.0e-37 157.1 82 87.8
Lalb_Chr01g0004661 Lupinus albus HOM05D004020 ORTHO05D004735 6.0e-37 157.1 82 90.2
GSVIVG01031444001 Vitis vinifera HOM05D004020 ORTHO05D004735 6.0e-37 157.1 82 91.5
arahy.Tifrunner.gnm1.ann1.B084HG Arachis hypogaea HOM05D004020 ORTHO05D004735 7.8e-37 156.8 82 91.5
CiPaw.14G105600 Carya illinoinensis HOM05D004020 ORTHO05D004735 7.8e-37 156.8 82 89.0
RcHm_v2.0_Chr5g0056331 Rosa chinensis HOM05D004020 ORTHO05D004735 7.8e-37 156.8 82 91.5
vmacro03245 Vaccinium macrocarpon HOM05D004020 ORTHO05D004735 7.8e-37 156.8 85 85.9
Aqoxy2G01562 Aquilegia oxysepala HOM05D004020 ORTHO05D004735 1.0e-36 156.4 83 89.2
Duzib150G0506 Durio zibethinus HOM05D004020 ORTHO05D004735 1.0e-36 156.4 82 90.2
Lalb_Chr19g0136831 Lupinus albus HOM05D004020 ORTHO05D004735 1.0e-36 156.4 82 90.2
SGA_v2.0_scaffold27G11582 Striga asiatica HOM05D004020 ORTHO05D004735 1.0e-36 156.4 81 91.4
Thhalv10016162m.g Eutrema salsugineum HOM05D004020 ORTHO05D004735 1.3e-36 156.0 87 82.8
FvH4_3g30380 Fragaria vesca HOM05D004020 ORTHO05D004735 1.3e-36 156.0 82 90.2
Potri.001G212600 Populus trichocarpa HOM05D004020 ORTHO05D004735 1.3e-36 156.0 82 89.0
Prupe.6G114700 Prunus persica HOM05D004020 ORTHO05D004735 1.7e-36 155.6 82 89.0
AT2G27900 Arabidopsis thaliana HOM05D004020 ORTHO05D004735 2.3e-36 155.2 84 86.9
Duzib168G0446 Durio zibethinus HOM05D004020 ORTHO05D004735 2.3e-36 155.2 82 89.0
Rhsim13G0102300 Rhododendron simsii HOM05D004020 ORTHO05D004735 2.3e-36 155.2 85 84.7
Sabra04G0148500 Salix brachista HOM05D004020 ORTHO05D004735 2.3e-36 155.2 82 87.8
THA.LOC104800567 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 2.3e-36 155.2 83 88.0
ClCG01G012880 Citrullus lanatus HOM05D004020 ORTHO05D004735 3.0e-36 154.8 82 86.6
DCAR_031637 Daucus carota HOM05D004020 ORTHO05D004735 3.0e-36 154.8 84 86.9
MBI18_g10967_MAGBIO Magnolia biondii HOM05D004020 ORTHO05D004735 3.0e-36 154.8 84 86.9
PGR102G0426 Punica granatum HOM05D004020 ORTHO05D004735 3.0e-36 154.8 82 89.0
MELO3C004814.2 Cucumis melo HOM05D004020 ORTHO05D004735 3.9e-36 154.5 82 85.4
TAR633G2769 Trochodendron aralioides HOM05D004020 ORTHO05D004735 3.9e-36 154.5 83 86.7
Aa31LG5G8160 Aethionema arabicum HOM05D004020 ORTHO05D004735 5.0e-36 154.1 84 83.3
BcaC01g04955 Brassica carinata HOM05D004020 ORTHO05D004735 5.0e-36 154.1 87 82.8
C03p31750 Brassica napus HOM05D004020 ORTHO05D004735 5.0e-36 154.1 87 82.8
Cfa010130 Carpinus fangiana HOM05D004020 ORTHO05D004735 5.0e-36 154.1 82 89.0
Haze_23515 Corylus avellana HOM05D004020 ORTHO05D004735 5.0e-36 154.1 82 89.0
ECA238G2607 Erigeron canadensis HOM05D004020 ORTHO05D004735 5.0e-36 154.1 85 84.7
MD11G1151500 Malus domestica HOM05D004020 ORTHO05D004735 5.0e-36 154.1 82 89.0
TWI75G0197 Tripterygium wilfordii HOM05D004020 ORTHO05D004735 5.0e-36 154.1 82 87.8
CsaV3_1G014440 Cucumis sativus L. HOM05D004020 ORTHO05D004735 6.6e-36 153.7 82 84.1
FAN11G1674 Fragaria x ananassa HOM05D004020 ORTHO05D004735 6.6e-36 153.7 82 89.0
Hma1.2p1_1225F.1_g268540 Hydrangea macrophylla HOM05D004020 ORTHO05D004735 6.6e-36 153.7 82 86.6
Nitab4.5_0000173g0340 Nicotiana tabacum HOM05D004020 ORTHO05D004735 6.6e-36 153.7 82 86.6
CAN.G644.49 Capsicum annuum HOM05D004020 ORTHO05D004735 8.6e-36 153.3 82 86.6
Migut.D02305 Erythranthe guttata HOM05D004020 ORTHO05D004735 1.1e-35 152.9 82 86.6
Lsat_1_v5_gn_2_99000 Lactuca sativa HOM05D004020 ORTHO05D004735 1.1e-35 152.9 85 84.7
Psat7g191400 Pisum sativum HOM05D004020 ORTHO05D004735 1.1e-35 152.9 82 86.6
Sopen11g026290 Solanum pennellii HOM05D004020 ORTHO05D004735 1.1e-35 152.9 82 85.4
A03p26460 Brassica napus HOM05D004020 ORTHO05D004735 1.5e-35 152.5 87 81.6
BcaB01g03084 Brassica carinata HOM05D004020 ORTHO05D004735 1.9e-35 152.1 87 81.6
Carub.0004s0864 Capsella rubella HOM05D004020 ORTHO05D004735 1.9e-35 152.1 87 81.6
QL01p014670 Quercus lobata HOM05D004020 ORTHO05D004735 1.9e-35 152.1 82 86.6
SalBow6G5048 Salvia bowleyana HOM05D004020 ORTHO05D004735 1.9e-35 152.1 82 86.6
Peaxi162Scf00150g00917 Petunia axillaris HOM05D004020 ORTHO05D004735 2.5e-35 151.8 82 85.4
Actinidia07194 Actinidia chinensis HOM05D004020 ORTHO05D004735 3.3e-35 151.4 84 84.5
Medtr4g056510 Medicago truncatula HOM05D004020 ORTHO05D004735 3.3e-35 151.4 82 85.4
ATR1158G033 Amborella trichopoda HOM05D004020 ORTHO05D004735 4.3e-35 151.0 83 81.9
HPP92_022573 Vanilla planifolia HOM05D004020 ORTHO05D004735 4.3e-35 151.0 83 85.5
BcaB06g28175 Brassica carinata HOM05D004020 ORTHO05D004735 5.6e-35 150.6 87 80.5
A04p21190 Brassica napus HOM05D004020 ORTHO05D004735 5.6e-35 150.6 87 80.5
BraA04t17688Z Brassica rapa HOM05D004020 ORTHO05D004735 5.6e-35 150.6 87 80.5
THA.LOC104826398 Tarenaya hassleriana HOM05D004020 ORTHO05D004735 5.6e-35 150.6 82 86.6
EL10Ac9g20998 Beta vulgaris HOM05D004020 ORTHO05D004735 7.3e-35 150.2 82 84.1
MSTRG.18711 Avicennia marina HOM05D004020 ORTHO05D004735 9.5e-35 149.8 82 84.1
Ca_19329_v3 Cicer arietinum L. HOM05D004020 ORTHO05D004735 9.5e-35 149.8 82 84.1
HanXRQChr02g0055251 Helianthus annuus HOM05D004020 ORTHO05D004735 9.5e-35 149.8 84 84.5
MD03G1129700 Malus domestica HOM05D004020 ORTHO05D004735 9.5e-35 149.8 82 86.6
CANSAT64G1073 Cannabis sativa HOM05D004020 ORTHO05D004735 1.2e-34 149.4 82 81.7
CANSAT64G1975 Cannabis sativa HOM05D004020 ORTHO05D004735 1.2e-34 149.4 82 81.7
CARHR120590 Cardamine hirsuta HOM05D004020 ORTHO05D004735 1.2e-34 149.4 84 82.1
AUR62024038 Chenopodium quinoa HOM05D004020 ORTHO05D004735 1.6e-34 149.1 84 82.1
BolC3t15517H Brassica oleracea HOM05D004020 ORTHO05D004735 3.6e-34 147.9 92 78.3
Os10g0546300 Oryza sativa ssp. japonica HOM05D004020 ORTHO05D004735 3.6e-34 147.9 83 80.7
CDE08G1223 Ceratophyllum demersum HOM05D004020 ORTHO05D004735 4.7e-34 147.5 84 81.0
Ah.01g015940 Amaranthus hybridus HOM05D004020 ORTHO05D004735 6.2e-34 147.1 82 82.9
BcaC02g08224 Brassica carinata HOM05D004020 ORTHO05D004735 6.2e-34 147.1 87 77.0
C04p57020 Brassica napus HOM05D004020 ORTHO05D004735 6.2e-34 147.1 87 77.0
BolC4t27237H Brassica oleracea HOM05D004020 ORTHO05D004735 6.2e-34 147.1 87 77.0
PSO339G0247 Papaver somniferum HOM05D004020 ORTHO05D004735 6.2e-34 147.1 83 81.9
PSO801G0568 Papaver somniferum HOM05D004020 ORTHO05D004735 6.2e-34 147.1 83 81.9
TPR.G35043 Trifolium pratense HOM05D004020 ORTHO05D004735 6.2e-34 147.1 82 81.7
FAN21G0469 Fragaria x ananassa HOM05D004020 ORTHO05D004735 8.0e-34 146.7 77 89.6
Sp4g10720 Schrenkiella parvula HOM05D004020 ORTHO05D004735 1.4e-33 146.0 83 80.7
Lsat_1_v5_gn_6_42101 Lactuca sativa HOM05D004020 ORTHO05D004735 1.8e-33 145.6 83 80.7
Oeu007301.5 Olea europaea HOM05D004020 ORTHO05D004735 3.1e-33 144.8 77 89.6
Zm00001eb022740 Zea mays HOM05D004020 ORTHO05D004735 6.8e-33 143.7 83 78.3
AL4G22350 Arabidopsis lyrata HOM05D004020 ORTHO05D004735 8.9e-33 143.3 84 79.8
unitig_746.g26602 Utricularia gibba HOM05D004020 ORTHO05D004735 2.0e-32 142.1 84 76.2
Hund07762 Selenicereus undatus HOM05D004020 ORTHO05D004735 5.8e-32 140.6 82 84.1
arahy.Tifrunner.gnm1.ann1.MMVL4X Arachis hypogaea HOM05D004020 ORTHO05D004735 1.3e-31 139.4 82 79.3
arahy.Tifrunner.gnm1.ann1.533Y7U Arachis hypogaea HOM05D004020 ORTHO05D004735 2.7e-29 131.7 91 71.4
Cc01_g10110 Coffea canephora HOM05D004020 ORTHO05D004735 1.7e-28 129.0 83 74.7
SHI06179 Sapria himalayana HOM05D004020 ORTHO05D004735 2.5e-27 125.2 86 70.9
Mapoly0001s0255 Marchantia polymorpha HOM05D004020 ORTHO05D004735 2.1e-26 122.1 83 67.5
Pp3c5_16860 Physcomitrium patens HOM05D004020 ORTHO05D004735 8.1e-26 120.2 83 62.7
SMO118G0476 Selaginella moellendorffii HOM05D004020 ORTHO05D004735 8.1e-26 120.2 83 63.9
AagrBONN_evm.TU.Sc2ySwM_340.402 Anthoceros agrestis HOM05D004020 ORTHO05D004735 1.1e-25 119.8 86 61.6
Pp3c16_8720 Physcomitrium patens HOM05D004020 ORTHO05D004735 1.5e-24 115.9 83 59.0
AagrBONN_evm.TU.Sc2ySwM_117.107 Anthoceros agrestis HOM05D004020 ORTHO05D004735 3.4e-24 114.8 76 69.7
C06p19250 Brassica napus HOM05D004020 ORTHO05D004735 9.2e-22 106.7 88 62.5
C06p24240 Brassica napus HOM05D004020 ORTHO05D004735 2.5e-19 98.6 99 54.5
Sc06g0008980 Simmondsia chinensis HOM05D004020 ORTHO05D004735 1.6e-18 95.9 49 87.8
PRCOL_00006567 Prasinoderma coloniale HOM05D004020 ORTHO05D004735 3.0e-12 75.1 83 41.0
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 3.8e-07 58.2 78 33.3
AUR62041305 Chenopodium quinoa HOM05D004020 ORTHO05D004735 1.4e-06 56.2 32 84.4


User provided reference genes

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