Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc43.15 Carica papaya HOM05D004097 ORTHO05D043419 1.3e-45 186.0 92 100.0
Prupe.1G228800 Prunus persica HOM05D004097 ORTHO05D005352 1.7e-26 122.5 78 74.4
TWI36G0618 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 2.2e-26 122.1 69 82.6
MD13G1116700 Malus domestica HOM05D004097 ORTHO05D005352 6.5e-26 120.6 78 74.4
MD16G1117400 Malus domestica HOM05D004097 ORTHO05D005352 6.5e-26 120.6 78 73.1
COL.COLO4_20377 Corchorus olitorius HOM05D004097 ORTHO05D005352 1.5e-25 119.4 69 79.7
TWI18G1202 Tripterygium wilfordii HOM05D004097 ORTHO05D005352 1.5e-25 119.4 69 78.3
FAN17G1448 Fragaria x ananassa HOM05D004097 ORTHO05D005352 1.9e-25 119.0 69 78.3
Gohir.A01G155000 Gossypium hirsutum HOM05D004097 ORTHO05D005352 4.2e-25 117.9 69 79.7
Thecc.02G212500 Theobroma cacao HOM05D004097 ORTHO05D005352 4.2e-25 117.9 69 78.3
CiPaw.05G112000 Carya illinoinensis HOM05D004097 ORTHO05D005352 5.5e-25 117.5 69 76.8
Haze_12391 Corylus avellana HOM05D004097 ORTHO05D005352 5.5e-25 117.5 68 79.4
RcHm_v2.0_Chr4g0430631 Rosa chinensis HOM05D004097 ORTHO05D005352 1.2e-24 116.3 69 73.9
FAN07G0057 Fragaria x ananassa HOM05D004097 ORTHO05D005352 1.6e-24 115.9 69 75.4
Gohir.D01G154900 Gossypium hirsutum HOM05D004097 ORTHO05D005352 2.1e-24 115.5 69 78.3
Gorai.002G191800 Gossypium raimondii HOM05D004097 ORTHO05D005352 2.1e-24 115.5 69 78.3
Glyma.05G146500 Glycine max HOM05D004097 ORTHO05D005352 2.7e-24 115.2 69 79.7
CSS0021321 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 3.6e-24 114.8 78 67.9
THA.LOC104807884 Tarenaya hassleriana HOM05D004097 ORTHO05D005352 3.6e-24 114.8 69 79.7
Cfa009333 Carpinus fangiana HOM05D004097 ORTHO05D005352 6.1e-24 114.0 69 73.9
Potri.010G059000 Populus trichocarpa HOM05D004097 ORTHO05D005352 6.1e-24 114.0 69 73.9
QL03p053766 Quercus lobata HOM05D004097 ORTHO05D005352 8.0e-24 113.6 69 73.9
arahy.Tifrunner.gnm1.ann1.7LT28F Arachis hypogaea HOM05D004097 ORTHO05D005352 1.0e-23 113.2 69 76.8
CSS0033535 Camellia sinensis var. sinensis HOM05D004097 ORTHO05D005352 1.0e-23 113.2 78 66.7
FvH4_4g23960 Fragaria vesca HOM05D004097 ORTHO05D005352 1.4e-23 112.8 69 76.8
FAN12G2099 Fragaria x ananassa HOM05D004097 ORTHO05D005352 1.4e-23 112.8 69 76.8
Lj4g0020055 Lotus japonicus HOM05D004097 ORTHO05D005352 1.4e-23 112.8 69 76.8
Sc04g0010030 Simmondsia chinensis HOM05D004097 ORTHO05D005352 1.4e-23 112.8 69 78.3
GSVIVG01010441001 Vitis vinifera HOM05D004097 ORTHO05D005352 1.4e-23 112.8 69 73.9
C06p38670 Brassica napus HOM05D004097 ORTHO05D005352 1.8e-23 112.5 70 77.1
Hma1.2p1_0668F.1_g200000 Hydrangea macrophylla HOM05D004097 ORTHO05D005352 1.8e-23 112.5 69 73.9
Manes.13G018100 Manihot esculenta HOM05D004097 ORTHO05D005352 1.8e-23 112.5 69 75.4
Atru.chr11.2303 Acer truncatum HOM05D004097 ORTHO05D005352 2.3e-23 112.1 69 76.8
Cc00_g13540 Coffea canephora HOM05D004097 ORTHO05D005352 2.3e-23 112.1 69 73.9
Eucgr.B03480 Eucalyptus grandis HOM05D004097 ORTHO05D005352 2.3e-23 112.1 69 76.8
Sopen05g010470 Solanum pennellii HOM05D004097 ORTHO05D005352 2.3e-23 112.1 78 67.9
AT1G67490 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 3.0e-23 111.7 70 77.1
Glyma.08G103233 Glycine max HOM05D004097 ORTHO05D005352 3.0e-23 111.7 69 76.8
Ciclev10030695m.g Citrus clementina HOM05D004097 ORTHO05D005352 4.0e-23 111.3 69 75.4
Lj6C825T6 Lonicera japonica HOM05D004097 ORTHO05D005352 4.0e-23 111.3 69 75.4
Aa31sc781G10 Aethionema arabicum HOM05D004097 ORTHO05D005352 5.2e-23 110.9 70 77.1
Duzib248G1376 Durio zibethinus HOM05D004097 ORTHO05D005352 5.2e-23 110.9 78 67.9
Medtr8g080360 Medicago truncatula HOM05D004097 ORTHO05D005352 5.2e-23 110.9 69 75.4
AL2G26080 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 6.8e-23 110.5 70 75.7
arahy.Tifrunner.gnm1.ann1.11CB4V Arachis hypogaea HOM05D004097 ORTHO05D005352 6.8e-23 110.5 69 75.4
BcaB03g15361 Brassica carinata HOM05D004097 ORTHO05D005352 6.8e-23 110.5 70 74.3
Duzib251G0245 Durio zibethinus HOM05D004097 ORTHO05D005352 6.8e-23 110.5 69 73.9
Medtr8g080290 Medicago truncatula HOM05D004097 ORTHO05D005352 6.8e-23 110.5 69 73.9
Hund25455 Selenicereus undatus HOM05D004097 ORTHO05D005352 6.8e-23 110.5 69 76.8
Solyc05g015220.3 Solanum lycopersicum HOM05D004097 ORTHO05D005352 6.8e-23 110.5 78 66.7
BolC6t38956H Brassica oleracea HOM05D004097 ORTHO05D005352 1.2e-22 109.8 70 74.3
Rhsim12G0102000 Rhododendron simsii HOM05D004097 ORTHO05D005352 1.2e-22 109.8 69 72.5
Sabra10G0046600 Salix brachista HOM05D004097 ORTHO05D005352 1.2e-22 109.8 69 71.0
DCAR_031191 Daucus carota HOM05D004097 ORTHO05D005352 1.5e-22 109.4 78 67.9
BraA07t30877Z Brassica rapa HOM05D004097 ORTHO05D005352 2.0e-22 109.0 70 74.3
MBI11_g07450_MAGBIO Magnolia biondii HOM05D004097 ORTHO05D005352 2.0e-22 109.0 69 76.8
Actinidia20697 Actinidia chinensis HOM05D004097 ORTHO05D005352 2.6e-22 108.6 69 73.9
CANSAT01G0794 Cannabis sativa HOM05D004097 ORTHO05D005352 2.6e-22 108.6 69 72.5
CsaV3_5G030370 Cucumis sativus L. HOM05D004097 ORTHO05D005352 3.4e-22 108.2 78 66.7
TPR.G17087 Trifolium pratense HOM05D004097 ORTHO05D005352 3.4e-22 108.2 69 73.9
A07p32530 Brassica napus HOM05D004097 ORTHO05D005352 4.4e-22 107.8 70 72.9
Thhalv10018104m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 4.4e-22 107.8 70 74.3
Nn4g22358 Nelumbo nucifera HOM05D004097 ORTHO05D005352 4.4e-22 107.8 69 69.6
TAR629G3065 Trochodendron aralioides HOM05D004097 ORTHO05D005352 4.4e-22 107.8 68 75.0
A07p12040 Brassica napus HOM05D004097 ORTHO05D005352 5.7e-22 107.5 70 72.9
Carub.0002s1382 Capsella rubella HOM05D004097 ORTHO05D005352 5.7e-22 107.5 70 74.3
Dinv14824 Davidia involucrata HOM05D004097 ORTHO05D005352 5.7e-22 107.5 69 72.5
Phvul.002G174800 Phaseolus vulgaris HOM05D004097 ORTHO05D005352 5.7e-22 107.5 69 73.9
Ca_18045_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 7.5e-22 107.1 68 73.5
Lalb_Chr13g0294221 Lupinus albus HOM05D004097 ORTHO05D005352 7.5e-22 107.1 69 75.4
Sp1g23450 Schrenkiella parvula HOM05D004097 ORTHO05D005352 7.5e-22 107.1 70 74.3
Sp5g22470 Schrenkiella parvula HOM05D004097 ORTHO05D005352 7.5e-22 107.1 70 72.9
TPR.G17069 Trifolium pratense HOM05D004097 ORTHO05D005352 7.5e-22 107.1 69 72.5
VMungo0251G0768 Vigna mungo HOM05D004097 ORTHO05D005352 7.5e-22 107.1 69 73.9
CARHR060060 Cardamine hirsuta HOM05D004097 ORTHO05D005352 9.8e-22 106.7 70 72.9
Ca_18044_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 9.8e-22 106.7 69 71.0
Thhalv10006835m.g Eutrema salsugineum HOM05D004097 ORTHO05D005352 1.3e-21 106.3 70 74.3
BcaB03g13996 Brassica carinata HOM05D004097 ORTHO05D005352 1.7e-21 105.9 70 71.4
PGR102G2071 Punica granatum HOM05D004097 ORTHO05D005352 1.7e-21 105.9 74 67.6
Ah.02g130710 Amaranthus hybridus HOM05D004097 ORTHO05D005352 2.2e-21 105.5 69 69.6
BcaC06g35272 Brassica carinata HOM05D004097 ORTHO05D005352 2.2e-21 105.5 70 72.9
C07p17980 Brassica napus HOM05D004097 ORTHO05D005352 2.2e-21 105.5 70 72.9
BolC7t42308H Brassica oleracea HOM05D004097 ORTHO05D005352 2.2e-21 105.5 70 72.9
Psat7g078160 Pisum sativum HOM05D004097 ORTHO05D005352 2.2e-21 105.5 69 71.0
AL1G40600 Arabidopsis lyrata HOM05D004097 ORTHO05D005352 2.8e-21 105.1 70 71.4
MELO3C011876.2 Cucumis melo HOM05D004097 ORTHO05D005352 2.8e-21 105.1 78 65.4
PSO017G2193 Papaver somniferum HOM05D004097 ORTHO05D005352 2.8e-21 105.1 69 71.0
Ca_18046_v3 Cicer arietinum L. HOM05D004097 ORTHO05D005352 3.7e-21 104.8 69 71.0
Glyma.05G146400 Glycine max HOM05D004097 ORTHO05D005352 3.7e-21 104.8 69 71.0
Oeu019032.1 Olea europaea HOM05D004097 ORTHO05D005352 3.7e-21 104.8 69 69.6
Aa31LG7G6710 Aethionema arabicum HOM05D004097 ORTHO05D005352 4.8e-21 104.4 79 64.6
PSO478G3686 Papaver somniferum HOM05D004097 ORTHO05D005352 4.8e-21 104.4 69 69.6
MSTRG.7991 Avicennia marina HOM05D004097 ORTHO05D005352 6.3e-21 104.0 69 71.0
EL10Ac6g13480 Beta vulgaris HOM05D004097 ORTHO05D005352 6.3e-21 104.0 69 66.7
BcaB03g13994 Brassica carinata HOM05D004097 ORTHO05D005352 6.3e-21 104.0 70 70.0
Carub.0001s2575 Capsella rubella HOM05D004097 ORTHO05D005352 6.3e-21 104.0 70 71.4
CAN.G1548.3 Capsicum annuum HOM05D004097 ORTHO05D005352 6.3e-21 104.0 69 69.6
CAN.G311.73 Capsicum annuum HOM05D004097 ORTHO05D005352 6.3e-21 104.0 69 69.6
CARHR026770 Cardamine hirsuta HOM05D004097 ORTHO05D005352 6.3e-21 104.0 70 70.0
CAN.G49.22 Capsicum annuum HOM05D004097 ORTHO05D043419 1.1e-20 103.2 72 68.1
ECA246G4064 Erigeron canadensis HOM05D004097 ORTHO05D005352 1.1e-20 103.2 69 68.1
SalBow2G2696 Salvia bowleyana HOM05D004097 ORTHO05D005352 1.1e-20 103.2 69 71.0
ClCG11G013780 Citrullus lanatus HOM05D004097 ORTHO05D005352 1.4e-20 102.8 69 69.6
Nitab4.5_0002174g0010 Nicotiana tabacum HOM05D004097 ORTHO05D005352 1.4e-20 102.8 69 66.7
SGA_v2.0_scaffold130G34253 Striga asiatica HOM05D004097 ORTHO05D005352 1.4e-20 102.8 78 65.4
HPP92_023192 Vanilla planifolia HOM05D004097 ORTHO05D005352 2.4e-20 102.1 69 68.1
Psat7g078280 Pisum sativum HOM05D004097 ORTHO05D005352 4.1e-20 101.3 69 71.0
Aqoxy5G03417 Aquilegia oxysepala HOM05D004097 ORTHO05D005352 5.4e-20 100.9 69 66.7
AUR62024129 Chenopodium quinoa HOM05D004097 ORTHO05D005352 5.4e-20 100.9 69 65.2
Nitab4.5_0005179g0010 Nicotiana tabacum HOM05D004097 ORTHO05D005352 7.0e-20 100.5 69 65.2
AUR62005598 Chenopodium quinoa HOM05D004097 ORTHO05D005352 9.1e-20 100.1 69 65.2
Lalb_Chr13g0294231 Lupinus albus HOM05D004097 ORTHO05D005352 1.6e-19 99.4 81 61.7
AT1G24320 Arabidopsis thaliana HOM05D004097 ORTHO05D005352 2.0e-19 99.0 70 70.0
HanXRQChr17g0540261 Helianthus annuus HOM05D004097 ORTHO05D005352 2.0e-19 99.0 69 63.8
Peaxi162Scf00128g01140 Petunia axillaris HOM05D004097 ORTHO05D005352 2.0e-19 99.0 69 63.8
SHI17952 Sapria himalayana HOM05D004097 ORTHO05D005352 2.0e-19 99.0 68 70.6
Migut.K00711 Erythranthe guttata HOM05D004097 ORTHO05D005352 3.5e-19 98.2 69 71.0
Lsat_1_v5_gn_3_29780 Lactuca sativa HOM05D004097 ORTHO05D005352 5.9e-19 97.4 69 65.2
PSO675G1898 Papaver somniferum HOM05D004097 ORTHO05D005352 1.3e-18 96.3 69 66.7
Sed0007371 Sechium edule HOM05D004097 ORTHO05D005352 1.7e-18 95.9 77 63.6
ATR0561G059 Amborella trichopoda HOM05D004097 ORTHO05D005352 5.0e-18 94.4 69 63.8
Os01g0921200 Oryza sativa ssp. japonica HOM05D004097 ORTHO05D005352 1.1e-17 93.2 69 59.4
VMungo0251G3103 Vigna mungo HOM05D004097 ORTHO05D005352 1.1e-17 93.2 69 62.3
BcaB02g06725 Brassica carinata HOM05D004097 ORTHO05D005352 1.5e-17 92.8 77 58.4
Zm00001eb143210 Zea mays HOM05D004097 ORTHO05D005352 5.5e-17 90.9 69 59.4
BolC5t29329H Brassica oleracea HOM05D004097 ORTHO05D005352 2.1e-16 89.0 77 54.5
C05p05580 Brassica napus HOM05D004097 ORTHO05D005352 6.1e-16 87.4 81 53.1
DCAR_026468 Daucus carota HOM05D004097 ORTHO05D005352 8.0e-16 87.0 69 58.0
BraA10t42875Z Brassica rapa HOM05D004097 ORTHO05D108425 1.4e-15 86.3 77 53.2
CDE05G0715 Ceratophyllum demersum HOM05D004097 ORTHO05D005352 3.4e-14 81.6 65 56.9
Sp1g06290 Schrenkiella parvula HOM05D004097 ORTHO05D005352 4.4e-14 81.3 77 50.6
SMO358G0259 Selaginella moellendorffii HOM05D004097 ORTHO05D005352 1.3e-13 79.7 84 48.8
A10p06090 Brassica napus HOM05D004097 ORTHO05D005352 4.9e-13 77.8 68 52.9
AagrBONN_evm.TU.Sc2ySwM_344.2645 Anthoceros agrestis HOM05D004097 ORTHO05D005352 6.3e-13 77.4 69 55.1
SEGI_39835 Sequoiadendron giganteum HOM05D004097 ORTHO05D005352 6.3e-13 77.4 78 52.6
CBR_g11887 Chara braunii HOM05D004097 ORTHO05D005352 2.4e-12 75.5 69 53.6
Pp3c11_13660 Physcomitrium patens HOM05D004097 ORTHO05D005352 2.4e-12 75.5 68 51.5
Cre13.g579734 Chlamydomonas reinhardtii HOM05D004097 ORTHO05D005352 3.8e-10 68.2 69 50.7
Mapoly0071s0095 Marchantia polymorpha HOM05D004097 ORTHO05D005352 6.6e-10 67.4 69 47.8


User provided reference genes

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