Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 6.1e-193 677.6 402 100.0
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 9.8e-143 510.8 357 77.9
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 3.7e-142 508.8 355 77.2
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 6.4e-142 508.1 354 79.9
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 7.8e-140 501.1 388 79.4
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.0e-139 500.7 354 77.1
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 3.0e-139 499.2 354 76.6
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 5.0e-139 498.4 354 75.4
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 1.9e-138 496.5 355 78.0
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 2.5e-138 496.1 406 69.7
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 7.3e-138 494.6 358 76.3
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 9.5e-138 494.2 357 78.7
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 1.2e-137 493.8 354 76.0
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 2.3e-136 489.6 345 78.6
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 2.3e-136 489.6 410 70.5
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 3.4e-135 485.7 359 74.7
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 9.8e-135 484.2 381 71.7
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 3.7e-134 482.3 357 72.8
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 4.9e-134 481.9 357 72.3
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 1.1e-133 480.7 357 73.4
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 9.2e-133 477.6 364 73.1
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 9.2e-133 477.6 357 75.9
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 1.6e-132 476.9 350 74.3
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 2.0e-132 476.5 346 76.6
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 2.0e-132 476.5 354 72.9
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 4.6e-132 475.3 347 73.2
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 1.0e-131 474.2 357 75.1
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.0e-131 474.2 360 76.1
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 6.6e-131 471.5 350 74.9
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 1.5e-130 470.3 410 69.0
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 2.5e-130 469.5 346 74.0
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 9.5e-130 467.6 343 74.9
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 1.4e-128 463.8 398 72.1
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.4e-128 463.8 300 81.7
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 2.3e-128 463.0 364 73.6
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 1.2e-127 460.7 362 71.3
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 2.0e-127 459.9 419 71.1
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 2.0e-127 459.9 419 71.1
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 7.5e-127 458.0 405 64.4
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 7.5e-127 458.0 402 70.4
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 9.8e-127 457.6 354 71.5
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 9.8e-127 457.6 402 69.9
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 9.8e-127 457.6 402 70.1
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 1.3e-126 457.2 368 70.9
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 2.9e-126 456.1 305 77.7
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 3.7e-126 455.7 313 76.4
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 4.9e-126 455.3 409 67.7
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 2.4e-125 453.0 355 71.5
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 4.1e-125 452.2 355 70.7
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 4.1e-125 452.2 402 66.4
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 7.1e-125 451.4 341 71.0
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 1.2e-124 450.7 355 71.3
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.6e-124 450.3 355 71.0
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 2.1e-124 449.9 322 73.9
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 2.7e-124 449.5 355 69.3
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 3.5e-124 449.1 398 73.9
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 4.6e-124 448.7 359 70.2
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 4.6e-124 448.7 421 66.3
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 1.3e-123 447.2 357 69.7
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.7e-123 446.8 355 70.7
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 3.0e-123 446.0 362 69.3
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 3.9e-123 445.7 358 72.3
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 3.9e-123 445.7 358 69.0
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 5.1e-123 445.3 286 80.8
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 1.1e-122 444.1 426 66.7
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 1.9e-122 443.4 411 66.9
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 9.5e-122 441.0 359 69.9
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 9.5e-122 441.0 296 77.7
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 3.6e-121 439.1 360 67.5
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 4.7e-121 438.7 286 80.4
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 6.2e-121 438.3 353 70.0
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 1.4e-120 437.2 357 69.2
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 1.8e-120 436.8 359 67.7
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 8.9e-120 434.5 291 78.4
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-119 434.1 361 69.3
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 9.9e-119 431.0 402 68.9
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 9.9e-119 431.0 402 68.9
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 1.3e-118 430.6 394 64.0
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 2.2e-118 429.9 360 66.1
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 2.2e-118 429.9 402 68.2
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 2.9e-118 429.5 366 66.1
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 3.8e-118 429.1 364 69.5
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 7.1e-117 424.9 292 77.1
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 7.1e-117 424.9 367 65.9
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 3.0e-115 419.5 398 59.8
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 3.0e-115 419.5 432 66.2
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 1.6e-113 413.7 399 62.9
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 1.2e-111 407.5 306 69.3
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-111 407.5 412 66.0
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 2.0e-111 406.8 410 66.1
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 7.6e-111 404.8 365 64.7
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 2.1e-105 386.7 268 73.9
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.8e-105 385.6 309 69.3
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 1.4e-104 384.0 337 64.1
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 5.3e-104 382.1 338 63.3
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 6.9e-104 381.7 324 66.7
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.8e-102 375.9 309 68.6
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 2.7e-100 369.8 261 72.4
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 2.0e-95 353.6 288 62.5
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 4.5e-95 352.4 303 61.4
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 2.2e-94 350.1 316 58.5
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 2.9e-94 349.7 304 61.2
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.5e-90 337.4 244 74.6
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 2.5e-90 336.7 273 70.7
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 6.9e-88 328.6 291 59.8
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 2.0e-87 327.0 398 50.0
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 3.4e-87 326.2 293 58.7
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 3.8e-86 322.8 437 51.7
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.9e-86 322.4 354 57.1
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 6.5e-86 322.0 304 56.9
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 6.5e-86 322.0 304 56.9
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 1.1e-80 304.7 281 55.9
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 2.0e-79 300.4 240 69.6
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 1.4e-77 294.3 288 53.1
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 1.8e-75 287.3 287 51.6
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 2.6e-71 273.5 356 53.1
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.4e-69 267.7 272 67.6
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 9.4e-69 265.0 191 77.5
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 4.7e-52 209.5 156 64.1
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 4.4e-50 203.0 227 69.2
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.5e-45 188.0 216 64.4
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.9e-33 146.4 109 74.3
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.0e-27 128.6 102 58.8
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 1.4e-27 128.3 93 66.7
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 2.5e-21 107.5 102 65.7
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 3.7e-17 93.6 119 45.4
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 4.9e-17 93.2 62 66.1
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 8.3e-17 92.4 275 28.7
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.2e-15 88.6 287 26.5
CARHR184250 Cardamine hirsuta HOM05D005952 ORTHO05D007262 3.0e-06 57.4 52 55.8
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 3.9e-06 57.0 38 65.8


User provided reference genes

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