Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 3.8e-244 847.8 449 100.0
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 5.0e-188 661.4 409 79.0
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 4.7e-186 654.8 405 78.3
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 4.0e-185 651.7 408 77.0
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 8.9e-185 650.6 410 77.1
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 3.4e-184 648.7 406 78.1
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 5.7e-184 647.9 404 77.7
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 1.8e-182 642.9 402 77.1
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 4.1e-182 641.7 400 77.5
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 6.6e-180 634.4 407 75.2
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 9.5e-179 630.6 400 76.5
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 4.7e-178 628.2 410 73.9
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.8e-177 626.3 400 76.0
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 4.0e-177 625.2 409 74.3
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 2.6e-176 622.5 400 75.5
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 1.7e-175 619.8 405 73.6
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 3.7e-175 618.6 400 75.2
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 8.3e-175 617.5 403 73.4
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.9e-174 616.3 400 75.0
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 2.4e-174 615.9 410 71.7
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 3.2e-174 615.5 400 73.5
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 5.4e-174 614.8 398 73.9
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 5.4e-174 614.8 394 76.1
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 7.0e-174 614.4 401 73.6
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 1.2e-173 613.6 402 73.4
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 2.7e-173 612.5 408 71.3
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 6.0e-173 611.3 400 74.5
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 6.0e-173 611.3 400 74.5
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.0e-172 610.5 400 73.5
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.0e-172 609.0 400 74.2
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 6.6e-172 607.8 407 71.0
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 1.5e-171 606.7 406 70.4
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 1.5e-171 606.7 397 74.8
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 1.5e-171 606.7 397 74.8
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.3e-171 605.5 415 70.8
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 4.3e-171 605.1 400 72.8
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 4.3e-171 605.1 401 72.6
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 5.6e-171 604.7 401 72.6
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 2.8e-170 602.4 404 70.8
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 8.9e-169 597.4 399 72.7
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 2.6e-168 595.9 411 70.1
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 4.4e-168 595.1 399 71.7
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 3.7e-167 592.0 397 71.8
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 4.9e-167 591.7 397 73.0
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 9.2e-166 587.4 403 69.7
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 1.2e-165 587.0 397 70.3
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 3.0e-164 582.4 396 69.9
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 7.3e-163 577.8 401 71.1
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 3.6e-162 575.5 405 68.9
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 4.7e-162 575.1 397 69.8
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 4.9e-159 565.1 399 69.4
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 6.4e-159 564.7 407 67.3
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 4.1e-158 562.0 406 68.0
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 4.1e-158 562.0 405 68.6
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 7.1e-158 561.2 404 66.8
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 3.5e-157 558.9 402 67.2
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 1.3e-156 557.0 371 72.8
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 5.1e-156 555.1 408 65.7
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 1.5e-155 553.5 402 67.9
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 1.6e-154 550.1 395 65.8
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 2.8e-154 549.3 406 65.3
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 6.2e-154 548.1 407 64.9
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 6.2e-154 548.1 415 65.1
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 8.1e-154 547.7 395 65.6
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 8.9e-153 544.3 401 64.3
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 1.2e-152 543.9 399 65.2
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.4e-152 542.3 419 63.7
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 3.4e-152 542.3 402 65.2
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 5.8e-152 541.6 398 64.3
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 9.9e-152 540.8 395 65.1
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 9.9e-152 540.8 405 63.7
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 1.7e-151 540.0 404 65.8
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.7e-151 540.0 449 59.9
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 8.4e-151 537.7 396 64.9
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 7.1e-150 534.6 398 64.1
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.2e-149 533.9 398 64.1
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 3.0e-148 529.3 436 62.4
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 3.9e-148 528.9 397 64.0
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 7.3e-147 524.6 403 63.8
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 7.3e-147 524.6 400 63.0
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 6.2e-146 521.5 311 79.1
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 8.1e-146 521.2 403 63.0
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 6.9e-145 518.1 396 62.9
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 9.0e-145 517.7 422 61.4
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 1.5e-144 516.9 396 62.6
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 2.9e-143 512.7 428 61.2
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 1.9e-142 510.0 403 62.3
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 7.8e-141 504.6 467 55.0
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 1.3e-140 503.8 312 76.0
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 6.6e-140 501.5 430 58.8
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 3.3e-139 499.2 370 67.0
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 7.1e-134 481.5 339 67.3
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.6e-133 480.3 356 62.9
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 3.3e-131 472.6 339 66.4
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 9.6e-131 471.1 323 67.2
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 3.2e-126 456.1 402 54.7
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 6.0e-125 451.8 313 70.3
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 2.5e-123 446.4 416 52.9
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.7e-122 442.6 280 74.3
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.2e-120 437.6 311 66.6
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 2.2e-114 416.8 352 59.1
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 7.9e-109 398.3 302 62.6
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 3.7e-106 389.4 278 68.7
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 4.5e-104 382.5 272 68.0
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 2.1e-101 373.6 365 51.2
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 1.0e-100 371.3 399 50.9
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 3.5e-96 356.3 293 57.0
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 1.2e-93 347.8 351 50.4
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.0e-92 344.7 283 64.0
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 1.5e-91 340.9 321 57.0
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 2.6e-91 340.1 238 67.2
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 6.3e-90 335.5 335 54.6
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 5.3e-89 332.4 285 56.8
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 4.7e-85 319.3 304 54.3
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 3.8e-79 299.7 194 72.2
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 5.0e-79 299.3 262 56.5
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 6.5e-79 298.9 212 68.4
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.2e-72 278.1 160 80.6
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 6.6e-71 272.3 269 52.4
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 8.3e-58 228.8 224 48.2
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.2e-56 224.9 161 67.7
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 5.4e-49 199.5 144 67.4
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 1.5e-38 164.9 114 67.5
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 2.5e-38 164.1 108 69.4
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 1.7e-34 151.4 193 48.2
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 6.4e-34 149.4 254 34.3
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 8.4e-34 149.1 122 66.4
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 7.3e-22 109.4 203 34.0
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 4.2e-17 93.6 59 72.9
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 4.3e-14 83.6 57 68.4


User provided reference genes

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